Glaciihabitans sp. INWT7: F1C58_06455
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Entry
F1C58_06455 CDS
T06751
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
gln
Glaciihabitans sp. INWT7
Pathway
gln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1C58_06455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gln03400
]
F1C58_06455
DNA repair and recombination proteins [BR:
gln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1C58_06455
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1C58_06455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_16
RsgA_GTPase
AAA_22
DUF4350
AAA_23
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QNE48393
UniProt:
A0A7G6ZCC8
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Position
complement(1318122..1320701)
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AA seq
859 aa
AA seq
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MDLIDGHTAEGRLDRVSVRGAREHNLRAVDVDIPRNALVAFTGVSGSGKSSLAFGTIYAE
AQRRFFESVAPYARRLIDQVGAPDIDSIEGLPPAVALPQRRTGGSARSTVGSATTVANVV
RMLYSRVGTYPLDAPMLFAEDFSANTVQGACPECHGIGRIYDVPEQLMVPDDSVSIRNRA
IAAWPTAWHGKQLQDSLISLGYDIDVPWRDLPSDQRNWALYTQESPQVPVFTDRSPSEVR
KAVASGAEPRYMSKFLGVKRYVLETFANSKSARMRQKAAEFMISVACPVCGGKRLKPDAL
AVRFEGADITEISRMPLDDVARLMEHVLLPEWRSTEQSGDESLPPEKRLAAQRLASELLG
RLSPIIDLGLGYLTLDRTTSTLSSGELQRMRLATQVLSRLFGVVFVLDEPSAGLHPADTE
ALLRILRNLRDSGNTVFYVEHSLDVIREADWIVDIGPGAGASGGTVVYSGRIDGLRDVKE
SVTRRYLFGGSNSAPDQPRERRVGDGRLTLHNVTRNNLSDVTVAFPLGAFTAITGVSGSG
KSTLINHGIPDLLRADLASVTGEAEGDLETTSEDPLDSASPVTTAGRASGPADRVRRIVH
VTQKPIGRTPRSNVATYTGVFDRIRSRLAATPEARRRHYGASRFSFNLPSGRCPICKGEG
MIEVELLFLPTVHAPCSACGGTRYNAETLEVRLEGKTVAEILAMSVSTAREFFDKDSDIV
QHLDALLDVGLGYISLGQSATELSGGEAQRVKLAAELRRAQLGDTLYLLDEPTSGLHPAD
SDRLIGHLQRLVDGGNTVIVVEHDMRVVAEADWVIDLGPGAGDAGGQVVATGTPEEVSVN
VASRTAPFLEAALVNRRQG
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacctaattgacggccatacagccgagggacgactcgaccgggtgagcgttcgcgga
gcccgcgaacacaacctgcgcgcagtcgacgtcgacattccgcggaacgccctcgtagcg
ttcaccggcgtctcaggatcgggcaagagttcgctcgcctttggcaccatctatgccgaa
gctcaacgccgattcttcgaatccgtcgctccctacgcgaggcgcctcatcgaccaggtg
ggtgcacccgacatcgattcgatcgaaggcctcccacccgcggtcgcccttccgcagcgc
cgaaccggcggctctgcacgttcgactgtggggagcgcgacgacggtggccaacgtcgtc
cgcatgctgtattcccgcgtagggacatatccgctcgacgccccaatgttgttcgccgaa
gacttctccgcaaacactgtccagggcgcttgccccgaatgccatggcatcggtcggatt
tacgacgtgcccgagcaactcatggttcccgacgactccgtgtcgattcgcaaccgggcg
attgcggcctggccgaccgcttggcacggcaagcaactccaggacagtctgatatctctc
ggatacgacatcgacgtgccctggcgggatcttcccagcgaccagcgcaactgggccttg
tacacgcaggagtcaccgcaggtgcccgtgttcacggaccgctctcccagcgaggtgcgc
aaggccgtggcatccggggcggaaccgcgttacatgagcaagttcctcggagtcaaacgc
tatgtcctggaaacatttgcgaactcgaagagtgcgcgaatgcgtcagaaagctgctgag
ttcatgatcagcgtcgcgtgccccgtctgcggcggcaagcggctcaagccggatgccctc
gccgtcaggttcgaaggcgccgacatcaccgagatctcgaggatgccgctggacgacgtg
gctcgcttgatggaacacgtcctcctgcctgagtggaggtcgaccgagcagtccggggac
gagagtctccctccggagaagcgtctcgccgcacaacggctcgcctccgagctgctggga
cggctgtcaccgatcatcgacctcggcctgggctacttaacgctcgaccgcacgacttcc
accctgtcgtccggggagctccagcgcatgcggttggcaactcaggtcctctcacgcctc
ttcggagtggtgttcgtcctggacgagccttccgccgggctccatcctgccgacaccgaa
gctttgcttcgcattctcagaaatctcagggactctggcaacaccgtcttctacgtcgaa
cactctctcgacgtcatccgggaggctgactggatcgtcgacatcggtcccggcgccggc
gcttccggcgggaccgttgtttattcgggaaggatcgacggccttcgtgacgtgaaggag
tccgtgacccgtcgctacctcttcggcggctcgaactccgctcccgatcaaccccgtgag
cgccgggtcggcgacggccggctcacactccataacgtcacgcgcaacaacctgtcggat
gtcaccgtggcctttcctctgggagccttcaccgccatcaccggggtgtccggttcgggt
aagtcgacgcttatcaatcacggcattccagacttgctccgcgcggacctcgccagtgtc
acgggtgaggccgaaggtgatctggagaccacctcggaggatccgctcgattcggcctcg
cctgtgacgacagccggccgcgcttcaggcccggccgatcgcgttcgtcggatcgtgcac
gtgacccagaaacccatcggacgaacaccacggtcgaatgtggcgacgtatacgggcgtc
ttcgatcgtatccgcagccgtcttgccgcgaccccagaagcgcggcgacgccactacgga
gccagcaggttctctttcaatctccccagcggtaggtgcccgatctgcaaaggcgaaggc
atgatcgaggtcgagcttctgttcctgccgacggtgcatgccccgtgctcggcgtgcggg
gggacgcgatacaacgcggagacgctggaggtccgactagagggcaagaccgtggccgaa
atactcgcgatgagtgtcagcacggcgcgggagttcttcgataaggacagcgacatcgtc
cagcacctcgacgctctcctggacgtcggtctcggatatatctcgctcggccagtcggcc
acagagttgtcgggaggagaagcgcaacgcgtcaagctggcggcagagctacgccgcgcc
caactgggcgacaccctctatctcctcgacgagccgacctcgggtctgcacccggccgat
tccgatcgtctcatcgggcacctccaacgccttgtcgacgggggaaacaccgtgatcgtc
gtcgagcacgacatgcgcgtcgtggccgaggccgattgggtgatagacctcggaccggga
gcaggagacgccggcggtcaggtggtggccacgggtacaccggaggaagtctcagtcaac
gtagcgagccgaacagcaccgttcctagaagcagcgctggtcaatcgacgtcaaggctaa
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