Glutamicibacter sp. ZJUTW: F0M17_11605
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Entry
F0M17_11605 CDS
T06225
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
glu
Glutamicibacter sp. ZJUTW
Pathway
glu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
glu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F0M17_11605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glu03021
]
F0M17_11605
03400 DNA repair and recombination proteins [BR:
glu03400
]
F0M17_11605
Enzymes [BR:
glu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F0M17_11605
Transcription machinery [BR:
glu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F0M17_11605
DNA repair and recombination proteins [BR:
glu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F0M17_11605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QEP07827
LinkDB
All DBs
Position
complement(2459422..2462928)
Genome browser
AA seq
1168 aa
AA seq
DB search
MVASSNPNNQTASSARDAAYAGRLSFAKIHEPLEVPNLLALQTESFDRLVGNQNWVERLA
KAEAAGDFSVPNTSGLAEIFEEISPIEDFQDTMSLSFSDPEFADPKYSIAECKDRDATYA
APLYVKAEFMNNETGEIKQQTVFMGDFPLMTEKGTFIINGTERVVVSQLVRSPGAYFESA
PDKTSDKTIFSARIIPSRGAWFELEIDKRDQIGVRLDRKRKQSVTVLLKALGWSEEQILS
EFGQYDSMRATLEKDSIKDQNEALLDIYRKLRPGEPPTVEAAQALLKNMYFEPKRYDLAK
VGRYKLNRKLGVETPVNAENASVLSLDDLVAMIRYLVALHAGEKTVQGTRKGEIVDIPVN
VDDIDHFGNRRIRAVGELIENQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
IKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPI
ETPEGPNIGLIGSLATYGRINAFGFIETPYRKVSNGLVSNEVEYLTADDELQHYIAQANA
PLDENGRFVEETVLVREKGGGGEPVIVDAAEVTFMDVSPRQMVSVATALIPFLEHDDANR
ALMGANMQRQAVPLLKSERPLVGTGMEKFAAVDAGDSVVASKPGVVTEVSADLVVVMNDD
GTESMYPIMKFARSNQGNAYNQRVRVSEGDRLEYQSIIADGPSTDSGELSLGKNLLVAFM
SWEGYNYEDAIILSQRMIFDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEDILSQL
DDRGIVYIGAEVEAGDVLVGRVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGES
GTVIGVRIFDRDNDDDLSPGVNQLVRVYVAQKRKISIGDKLAGRHGNKGVISRIMPLEDM
PFLEDGTPLDVILNPLGVPGRMNVGQVMEIHLGWAAKQGWKIEGEPEWVSALPNLPRETG
STTVATPVFDGASEEEIRGILDSTNKTRDGVRLIGNSGKAKLFDGRSGDPLPDPVSVGYM
YILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEI
LTIKSDDIHGRVKVYEAIVKGENVPEPGVPESFKVLIKEMQSLCLNVEVLGTDGNTIEMR
ESDEESFRAAEELGIDLSRSEPNSVEEV
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcctcgagcaaccctaacaaccaaaccgctagttcggctcgcgatgctgcatac
gctggccgactttcttttgcaaagattcacgaaccccttgaagtgcctaacctgctggca
ttgcagacggagagctttgaccgcctcgtcggcaaccagaactgggtagagcgcctggcc
aaggcagaagccgctggcgacttcagcgtgcccaacacctcgggcctggcagaaatcttc
gaggaaatctccccgatcgaggacttccaggacaccatgtccttgagcttctcggatccg
gagttcgctgatccaaagtactcgatcgctgagtgcaaggaccgcgacgccacctacgcg
gcaccgctgtatgtcaaggccgaattcatgaacaatgaaaccggcgaaatcaagcagcag
accgtgttcatgggcgatttcccgctgatgaccgaaaagggcaccttcatcatcaacggc
accgagcgtgtcgttgtttcccagctggttcgttccccaggcgcatacttcgagtccgcg
ccggacaagaccagtgacaagacgatcttctcggcacgcatcatcccatcgcgcggtgca
tggttcgagctggaaatcgacaagcgcgaccagatcggcgtacgccttgaccgcaagcgc
aagcagtcggtcaccgtcttgctcaaggccctgggctggagcgaagagcagatcctgtcc
gagttcggccagtacgattcgatgcgcgctaccttggaaaaggacagcatcaaggatcag
aacgaagccctgctggacatctaccgcaagctgcgtccaggcgagcctcctacggttgag
gctgcccaggcactgctgaagaacatgtacttcgagccaaagcgctacgacctggcaaag
gtcggccgctacaagctcaaccgcaagctgggcgtggagactccggtcaacgccgagaac
gcttcggtgctgtcgctggacgacctggtggccatgatccgctacctcgttgcactgcac
gcaggcgagaagactgtccagggtacccgcaagggcgagatcgtcgatattcctgtgaac
gtcgacgacatcgaccacttcggcaaccgccgcatccgcgccgtgggcgaactgatcgag
aaccaggtccgcaccggcctgtcccgcatggagcgtgttgtgcgcgagcgcatgaccacg
caggacgtcgaggcgatcacaccgcagaccctgatcaacatccgccctgtcgtggctgcg
atcaaggagttcttcggtacttcgcagctctcgcagttcatggaccagaacaacccgctg
gccggcctgacccacaagcgccgcctgtcggctctgggcccgggcggcctgtcccgcgac
cgcgcaggcatggaagtccgagacgtgcacccttcgcactacggacgcatgtgcccgatt
gaaacccccgaaggcccgaacatcggcctgatcggttcgttggctacctacggccgcatc
aacgccttcggcttcatcgagaccccgtaccgcaaggtttccaacggcctggtgtccaat
gaggtcgaatacctgaccgcggacgacgagctgcagcactacatcgcgcaggccaacgcg
ccgctggatgagaacggccgcttcgttgaagagaccgtactggttcgcgaaaagggcggt
ggcggcgagcctgtcatcgtcgacgccgctgaagtgaccttcatggacgtttcgcctcgc
cagatggtgtcggttgcaactgcgctgattccattcctcgagcacgacgacgccaaccga
gcactgatgggcgccaacatgcagcgccaggctgtgccgctgctgaagtccgagcgcccg
ctggtgggtaccggcatggagaagttcgccgcagttgacgccggcgactccgtggtcgca
tccaagcctggcgtggtcaccgaggtttcggctgacctggttgtcgtcatgaacgatgac
ggcaccgagtcgatgtacccgatcatgaagttcgcccgctccaaccagggcaacgcctac
aaccagcgcgtgcgcgtttcggaaggcgaccgcctggagtaccagtcgatcatcgccgac
ggtccgtcgaccgactcgggcgagctctcgctgggcaagaacctgctcgtggcattcatg
tcctgggaaggctacaactacgaggatgcgatcatcctctcccagcgcatgatcttcgac
gacgtgctcacctcgatccacatcgaagagcacgaggtcgacgcccgcgataccaagctg
ggtgccgaggaaatcacccgcgacatcccgaatgtctcggaagacatcctctcccagctc
gatgaccgcggcatcgtctacatcggtgcagaggtcgaggccggcgacgtgctggttggc
cgtgtcacccctaagggcgagaccgagctgaccccggaagaacgcctgctgcgtgccatc
ttcggcgagaagtcccgcgaagtgcgcgacacctcgctgaaggttccgcacggcgagtcc
ggcaccgtgatcggcgtgcgcatcttcgaccgcgacaacgacgacgacctgtcgcctggt
gtcaaccagctggtccgcgtttacgttgcgcagaagcgcaagatctccattggcgacaag
cttgcaggccgccacggcaacaagggcgtcatctcgcgcatcatgccgctggaggacatg
ccattcctcgaagacggcaccccgctggatgtcatcctgaacccgctgggtgttccaggc
cgcatgaacgtcggccaggtaatggaaatccacctgggctgggctgccaagcagggctgg
aagatcgagggcgagcctgaatgggtcagcgcgctgccgaacctgcctcgcgaaaccggt
tccaccaccgtggcaaccccggtcttcgatggcgcttcggaagaagagatccgcggcatc
ctggattcgaccaacaagacccgtgacggcgtgcgcctgattggcaactccggcaaggcg
aagttgttcgacggccgctccggcgacccgctgccggatccggtatccgtgggctacatg
tacatcttgaagctgcaccacctggtggacgacaagatccacgcccgttccaccggtcca
tactccatgatcacccagcagccgctgggcggtaaggcccagttcggtggccagcgcttc
ggtgaaatggaagtttgggcactggaagcatacggtgccgcttacacgctgcaggaaatc
ctgaccatcaagtcggatgacatccacggccgcgtgaaggtctacgaagctatcgtcaag
ggcgagaacgttccagagcctggtgttccagaatcgttcaaggtgctcatcaaggaaatg
cagtcgctgtgcttgaacgtcgaggtactcggtaccgacggcaacactatcgaaatgcgt
gagtcggacgaggaatcgttccgcgccgctgaagagctgggcatcgacctttcacggtcg
gagccgaactccgtagaggaagtgtaa
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integrated database retrieval system
