Glarea lozoyensis: GLAREA_00109
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Entry
GLAREA_00109 CDS
T04883
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
glz
Glarea lozoyensis
Pathway
glz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLAREA_00109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_00109
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GLAREA_00109
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GLAREA_00109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
Motif
Other DBs
NCBI-GeneID:
19459169
NCBI-ProteinID:
XP_008083060
UniProt:
S3DAF3
LinkDB
All DBs
Position
Unknown
AA seq
2183 aa
AA seq
DB search
MVNSRGGTFTPSPAQQTIVTGVSHSPHGSHHGAFSAGASPSTSSPTGSNSLTKIVVAQVY
LLLSTIKEDKDRTKWEEKAEQLRKLINDHGMEVFQKYFSRLVTANAHTIFGLSNRTPNNA
ATYPILCGEIEKIGRDVEQARKIAESIEAANEDIYRDFDLSTFMQHFHLDALEKTILALA
FKIGSRPDLKTKSDAILAANFIELTKILAQQFPESRDMAPEFLATIIDRFIQEHPPNFDQ
HAKDELIFAINFRYTGSEAATPTEILAALYLLKSLGDRNTLVHYLKLVGSKITQEEDTCI
HYLRAAKGEGVQLNEEQVAAALIYAAISQTPVLYMPTLVNSIRKVVSSISWPEVIRNFDQ
ESLRITPKQFLALYNGLRPLAQDGLLDIQHMWGGKWRNPETQLSFIGAFLSLTSDQLDAT
TIPNLQVSFTLEEFTGTEPETYERAAKAVKHPLVSSWALSAMFNVALEGQDASETIEAKR
LFQGVVVPNLDIFLVSAFGVPKPWPDIAVDTINTLFNRFLYKYDPNYDFVCDGLWKKDKS
WVAARLVDAHAKSPMDLPLILDHAIRHNWLEDLVSMLSGFGLDLTALAHARGRLDLKKWI
GLLDAAQRPNLSSSLITFLSIKARHELDYQKSDRLISMSLPVKTIYALLTVLREILDTAP
PEHELIIVQRQCITAYPRLINYGEGFDDVIDKNGESGNLLPRIANERMEEHYKRMYNQDL
EVRQVVEALRSYKRSQNPEDQDIFACMIHGLFDEYDIYSTYPLDALATTAVLFGGIIQHN
LISNIPLEVGLGMILEAVKPRSPPSESMFKFGLQALIQMKDRLSDWPGFCNQLLQIPGLQ
NTEVWTKAEEVWQATQEQGQNGLGNAADHQYPNGGITDNNIDEMLAPEPSCAPFNALWVD
DYGTDYDVPNSKVQEEIQFLMNNVTAENLEDKYVELRDMVAEQNQQWFASQLVEQRAKRE
PNNHQQYLNLIKLIGSKTLWSDILHETYVSAFRLLNSESVLHNQNDRTLLINLAIWLGSL
TLARDKPIKHQNIAFKQLLMEAFDTKRLIAVIPFVCKVMAQGQHSTVFKPPNPWVMDIIQ
LLMELYHHAPDVKLNQKFAIEVLCSDFGVNHEAIETSGDILNRAPIEEATEVMSQEVMDR
FENLAIIERLASERFSPEQIARSLPDLGPDLILPPPNDMVNQARLHEILRTAISRAVAEI
ISPVVERSVTIAAISTAQMIHKDFATEPDEERVRAAAINMVKKTAGSLALVTSKEPLRAS
MTNYIRSTSGELSQGLAEGTIIMCVNQNLELACKQVENKAEERAVPEIEEMMENELERRR
QHRLMRPEEPYIDPELSRWSWTIPSPYKLRPNRDGLNEHQMAIYDEFARQPRPQSISGTA
HVATSSDATRSMANEILQDQYSAVPHLTGPTEPPAMAHASNHQLPYAPSATTTNGRLPNM
PQSQMESRLVTENFEKTLMELKRVAAESSEEHYKDLPRPNPVVDFMDALFNLIVRCSGTP
AELDIILVDSLCAFVFSGSSQESLLVECLVTVLTQIYRIGAKYTNRIALRIGQQPSESLL
NFPLAAALIEEGLLEWQRVDSAISKAIQHRKEEALEFLLEIVTKFLCNDNPSALYTDLAR
SLEVAWNWIDDAALATPEVGQKLRQVMKASAVPQHGIRSVDDRLHAKQEQMAYVFDSWVR
LYDNSIATEKSSAEFIEQMFQTQLINDRDDLLIFLRQAIDSSVEKFEHLIQTHLIVDAYV
PIDALAKLVSLLVKRPQRDGEVKNDRAKYLGMILSLAVFVLNYHHLTRGEAFNQRVFARF
FSALLIQMKPLSKDELSELECRDILLVFARNFLELDPSYFPGFVFQWFSLISHRDFMPNL
LRLPEQEGWEPFAKIMETLLTYVGDLLKPIHLAEMTKRVYGGVLKILVVLQHDFPDFVSA
NHSRLCAKIPSHCIQLHNLILNANPVRFQKMPDPLQPGLKVDRIEEMRTSPQIVTNAEEI
LAQSDLLELLNKSIQQGPSEDVVAQISHTIQRKRGRQSSLGFTPINVDRRLIEALIIHVG
MQAIAKAEAKDAPTFAINTSDTALFKMLVHELQPEARYYFLSSMVDQLRYPNSHTHYFSQ
ALLNLFGSDMNDQEESDIRQQITRVLLERLAGQWPQPWGLIVTIHELVKNDQYMFFELPF
IKSATPDVAERFAAIAARPYPSM
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atggtcaactcaagagggggcacatttacaccttcgcctgcacagcaaaccattgtgact
ggcgttagtcattcacctcacggatcgcatcacggtgcctttagtgctggcgcaagtccc
agcacaagcagtcccactggatcaaattcacttaccaagatcgtggtcgctcaggtttac
ctcctcctcagcaccatcaaggaggataaggatcgcacaaagtgggaagagaaagctgag
cagctcagaaagctgatcaatgaccacggtatggaagtattccaaaagtacttcagtcgc
cttgtgactgccaatgcacacacgatctttggactgtcgaatagaacgccaaacaacgca
gcgacctatccgatattatgtggcgagatagagaagattgggcgagatgtcgagcaggca
agaaagattgcggaatcaatagaagccgcaaatgaggacatctatcgcgatttcgacctg
tcgaccttcatgcagcatttccacctagacgcgctcgagaagacaattctagcactggca
ttcaagataggctcgaggcctgacctcaaaaccaaatctgatgcaatattggctgcaaac
tttattgaactgactaaaatcctcgcccaacaattccccgaatctcgagatatggcgcct
gaattcctagcgaccattatcgatcgtttcattcaagaacatccacccaatttcgaccaa
cacgcaaaagacgagcttatcttcgccattaatttccgatacaccggttcagaagctgcc
actcctacagaaattctggctgctctatatctgctgaagagcttgggcgatcgaaacaca
ttagttcactatctaaagctagtcggatcgaaaattacacaggaagaagatacttgtata
cattatctgagagcagccaagggtgaaggtgtacagctgaatgaagagcaggtcgcggcg
gctttaatatatgccgccatcagtcaaacacccgtcttatatatgcccaccttggtcaac
agcatccgcaaagtcgtctcatcaattagctggcctgaagtaatccgaaattttgatcag
gaaagcctacgaattacaccaaaacagtttttggccctttacaacggcctccggcctctg
gcgcaagacggcttgttagacatccagcatatgtggggaggaaaatggcgtaatcctgaa
acgcaactttctttcattggtgcttttctctcgttgacatctgaccaacttgatgctaca
actattcctaacctacaagtatccttcacgttagaggagttcacaggaaccgagccggag
acgtatgaacgagcagcgaaagccgtcaagcatcctcttgtttcttcctgggcgttatcg
gctatgttcaatgttgcattggaaggccaagatgcctcagaaaccatagaggcaaaaaga
ctctttcagggcgtggttgttcctaatcttgacatttttctggtctctgctttcggcgtt
cccaaaccttggcctgatattgcggtcgacaccattaataccctatttaatcgcttcctc
tacaaatacgatcccaactacgattttgtctgcgacgggttatggaagaaggacaaatca
tgggttgctgcacggctcgtagatgcccatgcaaaatcaccaatggatttacctcttata
ttggaccatgcgattcgccataactggctggaggacttggtatctatgcttagcggcttt
gggctggatcttactgctcttgctcatgctcgaggccgattggacttaaagaaatggatc
gggctcctggatgctgctcaaaggccaaacctttcttcatcactgatcacatttttgagt
atcaaagcaagacatgagcttgattatcagaaatctgatcgtctcatcagcatgtcatta
cctgtcaagactatttacgcactattgactgtactacgggagatactcgatacggctcct
cctgaacatgagctcataatcgttcagcgccagtgcatcactgcgtatcctcgtcttatc
aattacggagaaggcttcgacgatgtgatcgacaaaaacggggagtctggtaatcttctc
ccgagaatagcaaacgagcggatggaagagcattacaagcggatgtacaatcaagacctg
gaggtcagacaagtcgtggaggctctgcgctcatataaaaggtcgcaaaatccagaggac
caagacatattcgcatgcatgattcatggcctctttgatgagtatgacatatactcaact
tatccactcgacgctcttgccacaacagctgtactgtttggtggtatcattcaacataat
ctgatatcaaacattccattggaggttggtctaggcatgattctcgaagcagtcaaacct
cgaagccctccaagcgagtccatgttcaaatttggcttacaggcccttatacaaatgaaa
gatcgactgagtgattggcccgggttctgcaatcagctacttcagatcccaggacttcag
aataccgaagtgtggaccaaagcggaagaagtgtggcaagccacgcaagaacagggtcaa
aatggacttggaaacgccgccgatcatcagtacccgaatggcggcattaccgacaacaat
attgacgaaatgctcgccccggagcccagctgtgctcccttcaacgccctttgggtggat
gattatggtaccgattacgacgttccgaacagtaaagtccaggaggaaatacagtttttg
atgaacaatgtcactgccgaaaatctagaggacaaatatgttgaacttagagacatggta
gcagagcaaaaccagcaatggttcgcaagccaattggttgaacaacgtgccaagagagaa
ccgaacaaccaccagcaatacctgaatctcatcaagcttatcggaagcaagacattgtgg
tctgacattcttcacgaaacatatgtgagcgctttcaggttattgaattctgaaagtgtg
ctccataaccagaacgatcgcactctcctgatcaaccttgcaatctggcttggttctctt
actctcgcacgggacaagccaatcaaacaccaaaacattgccttcaagcagctccttatg
gaggcgtttgataccaaaagacttatcgcggtcataccgttcgtttgtaaggttatggca
caaggacaacattcaacagtgttcaaaccgcctaatccttgggtcatggacatcatccag
cttctcatggagctctaccaccatgcacctgacgtgaaactgaaccaaaaatttgcgatc
gaggttctctgttcagattttggtgtgaaccacgaggccatcgagacttccggggacatt
ctcaatcgcgcaccgattgaggaggccacagaggtcatgtcccaggaggtcatggatcgc
ttcgaaaatcttgccatcatcgaacgtcttgcaagtgaaagattttctccagaacagatt
gcaagatctcttccggaccttggaccggatcttatcctgcctccaccaaatgacatggtc
aaccaagcacggctgcacgagattctgcgcactgccatcagccgtgctgttgctgagatc
atatcacctgtcgttgaaagatcagtgaccattgctgcgatttcaacggctcagatgatt
cataaggattttgctaccgaacccgacgaagagagggttcgtgcagctgctatcaacatg
gtaaagaagaccgctgggagtcttgccttagtaacgtcgaaggagccactgcgtgctagc
atgaccaactacatcaggtctacctctggtgagctttcgcagggtctggccgagggcacg
atcatcatgtgcgttaaccaaaaccttgaactggcttgcaagcaagttgagaacaaagcc
gaggagcgcgctgtccccgagattgaggaaatgatggagaacgagcttgaaaggcgacga
caacacaggctgatgagacctgaggagccttatattgatccagagctgagccgttggtcc
tggactataccctctccttacaagttgcgaccaaaccgggatggtctaaacgagcatcaa
atggccatctatgatgagtttgctagacagccacgtcctcagtcaatctcaggcactgct
catgtcgccacatcgtccgatgcgactagatcgatggccaacgagatattgcaagaccag
tactcggcagtgcctcatctcacaggccctacagagccacctgcgatggctcatgcgagc
aaccaccagcttccatatgctccaagtgccaccacaaccaatggccgactgccaaacatg
ccgcaatcacagatggaatcaaggcttgtcactgaaaattttgaaaagactctcatggaa
ctgaaacgagtcgcggctgaatcctcagaggaacattacaaagaccttccgcggcctaat
cctgtggtcgatttcatggatgcactattcaacttgatcgtcagatgttcaggaacccca
gctgaattggacatcattctagtggacagtctgtgtgcctttgttttcagcggctcgtcg
caagagtctctgctagtggagtgtctggtcacggtactaacacaaatttaccggattggc
gccaaatatacaaatcggatcgcactccgaattggccaacagcccagcgagtcactgctg
aatttcccactagccgctgctttaattgaagagggactacttgaatggcaacgtgtcgat
tcagcaatctctaaagccatccaacatcgcaaggaggaggcactcgagttcttgttggag
atagttacgaagttcttgtgcaatgacaacccttctgcactttatacggatctcgcaaga
agtttggaagttgcctggaactggattgacgatgcggcccttgcaacccctgaagttgga
caaaagttgaggcaagtcatgaaggcttccgctgtcccacaacacggtatccgcagcgta
gatgaccgattgcacgccaagcaggaacagatggcatatgtgtttgactcatgggttcgt
ctctatgacaacagcatcgcaactgagaaatcttctgccgagtttattgagcagatgttt
caaacgcagctcatcaacgatcgcgacgatctcctcatattcctccgacaagccatcgat
agctctgtggaaaaattcgagcacctcattcagacccacctcattgttgatgcctacgta
cctattgacgctcttgctaagctggtctcgttgcttgtcaaacggccccagcgtgatggt
gaagtgaagaatgaccgggctaagtatctaggaatgatactttcgctggctgtctttgtt
ctcaattaccatcacctcacccgtggggaagcttttaaccagagagtgttcgctcgcttc
ttttcggctttactaattcagatgaagccgctttccaaggacgagctaagtgagcttgaa
tgtcgcgacatcttgttggtcttcgcacgcaacttcctagaattggacccatcatatttc
cctgggttcgtgtttcaatggttcagcttgatctcacaccgagatttcatgcccaatcta
ttgagactccctgaacaagaaggatgggagccgtttgccaaaatcatggaaactttgtta
acttacgtcggcgatttgctgaaacccatccatctcgcagagatgacaaagcgagtctac
ggcggagttctcaaaatacttgtcgtcttgcaacatgatttcccagatttcgtttctgcc
aatcactccagactatgcgctaagatcccaagtcattgcattcagttgcacaatttaata
ctcaatgcgaacccggttcgattccagaagatgcccgatccgctgcaacctggattaaag
gtcgaccgcatcgaagagatgcgaaccagccctcagattgtgaccaatgctgaggagatc
ttggcacaaagtgatctcctggagctgctcaacaaatcaatccagcaaggcccttcagag
gatgtcgtggctcaaatatctcataccattcagcgcaaaagagggcgccaatctagtctt
ggcttcacccctatcaacgttgaccgacgactgatagaagcactgatcattcacgtgggt
atgcaagctattgcaaaagcggaggcgaaggatgcaccgaccttcgcaataaatacttcc
gatacagcactgttcaagatgcttgtgcatgaactacaacctgaagctcgctactacttt
ctcagcagcatggttgatcagctgcgatatccaaactcacatacgcactattttagtcaa
gcgttgttgaacctctttggcagcgatatgaacgaccaagaagagtcggatattcgccag
cagatcactcgggttctgctggaaagattggctggccaatggccacagccatggggactt
attgtcaccatccatgagctcgtcaagaacgatcagtacatgttcttcgaactcccattt
atcaagtctgcaacacccgatgtcgctgagcgcttcgcggctattgcagcacgcccatat
ccttcgatgtaa
DBGET
integrated database retrieval system
