Glarea lozoyensis: GLAREA_01696
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Entry
GLAREA_01696 CDS
T04883
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
glz
Glarea lozoyensis
Pathway
glz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GLAREA_01696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glz03021
]
GLAREA_01696
Enzymes [BR:
glz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GLAREA_01696
Transcription machinery [BR:
glz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
GLAREA_01696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Phage_zn_bind_4
Motif
Other DBs
NCBI-GeneID:
19460754
NCBI-ProteinID:
XP_008087103
UniProt:
S3CKS6
LinkDB
All DBs
Position
Unknown
AA seq
1693 aa
AA seq
DB search
MNISQPVSSAIDSVDFTFLSASEILSLSVARIENPETFDTLLHPVPQGLCSTCKLKDKAC
PGHVGHIELPVPVYHPTFMTQMLRLLRAKCRYCHYLRLSRKEVNRYLCKLRLIQYGLLNA
AEEVDNIEVSNTEDADGSGGEDGQASSVEKLIRLRNAHVKRNIKVAKQNQWDWQREKNEA
VAEARRVTIKEFLKTITTGKTCSNCKGISPTYRKDRFVKIFRKDLSPKEKAKMSLANIQA
KNAVTTLREREKRKADGDFDEGIADIDLSSNESNEDEEGDGEDLDVDGDVVMGDTATKTA
RSSKSKVAATPQIYCNPMEVKAELILLFENEQEILSLVYNSRSTVKKAAVVSPDMFFMQT
LLVPPNKFRPEAKTGAGEITENPQNTLYKSILRGCLLVSQIYDEVNGLTEETPYRIRDFG
DLQESWAGLQDAVNSLIDRDRNPIQGAAGKKNEDGIKQKLEKKEGLFRKNMMGKRVNFAA
RSVISPDPNIETNEIGVPPVFAKKLTYPEPVTSHNFKELQQAVINGPDIWPGAQAIENEH
GQVISLTIKTPDERLALANQLLAPSNNRANGSRNKKVHRHLTNGDVVLMNRQPTLHKPSM
MGHRARVLTGEKTIRMHYANCNTYNADFDGDEMNMHFPQNEVARAEVLQIADTDHQYLAG
TFGKPLRGLIQDHISVSVWMCSRDTFFDRATYQQLIYNSLRPESGHIVGDRIETVTPAII
KPKPLWTGKQVITTILRNIKPVDCAPLGLNSKPSVPGDRWGSDSNEDRVLFKGGEFITGI
LDKAQIGPSGGGFIHAIHEVYGPTAAGKTLSILGRLLTKFLHMRAFTCGMDDLRLTPRGE
QARRDTLKEAHRLGLEVASKYVSLQDQKPTDTDAELMERMEDVLRDDSKQGGLDVMMNAR
SGNLSSQITKACLPDGLVKQFPKNQMQNMTVSGAKGSAVNANLISCNLGQQVLEGRRVPV
MVSGKSLPCFRPYETNIRAGGYIVNRFLSGIRPQEYYFHAMAGREGLIDTAVKTSRSGYL
QRCLIKGMEGLKVEYDTSVRDSDGSMVQFLYGEDGLDVTKQVHLQDFKFLLENITSELSQ
LNYGDPNYEQIFSEKEIILKKMKKALKYSKANDPNGPDPVLSSFNPGKYGYATSEKFYDA
LTNYLKANPDGMVKDKEHPDGVGVRKALEPVLMAKYLKSVVDPGEAVGIVAGQSVGEPST
QMTLNTFHLAGHSTKNVTLGIPRLREIVMTASNHISTPSMTLRVNDELSAEDGEKFAKGI
SVLSLGEVLDEATVKERVGRGVAFSEARIYEVQVKLFPSKEYIDTYAITVADVLHTLEKK
FAPKLQALTRRALGRKKEEKSSKSTKGGVPEIGKSVGAIEDPAAATRRGSEDPQAEDEDD
DIEEDDAKQVNANALVSYAENDEEDDQVQAQMQKDSEQDDADVPDMEDEGIGGSPREPDS
DGEGQQKVDRQEQRATEASAEREARVMKNCSDVVRFRFDEEAGEWCDITLEYAADVPKIL
MMTVVEDALRQCLIQQIPGLGACNYIPNQDSSKYGNKIHLPVVQTVGVNLKAMQTYPHII
NPNTISTNDIAAMLANYGVEACRATIIQELAGVFGGHAISVDNRHLNLIADFMTRGGGFS
PFNRNGLRGSVSPFMKMSFETTVGFLADAVADGDFDDLSNPSSRIVVGRMSKVGTGAFDV
LTKVPTVRSDEES
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctctcagcctgtatcgtccgccatcgatagcgttgattttacctttctctcc
gcttctgaaatcctttcgctctctgtcgcaagaatcgaaaacccggagacttttgatact
ctgttgcatccagtgccgcagggtctctgctcaacatgtaagctcaaagataaagcgtgc
ccggggcatgttggccacattgagttgccagtgcctgtctatcatccgacatttatgaca
caaatgcttcggctgttacgagcgaagtgccggtattgtcattatttgaggctttctcga
aaggaagttaaccgttacttgtgcaaactgcgattgatccagtacggactactgaatgcg
gcagaggaggttgacaacatcgaagtctctaatacggaggatgccgatggaagtgggggt
gaagatgggcaggcctcgtcggttgaaaagctcattcgactaagaaatgctcatgtcaag
aggaatataaaggtggctaagcagaatcagtgggactggcagagggagaagaacgaagct
gttgcagaagcgagacgggtcacaatcaaggagttcttgaaaaccatcacgacaggaaag
acgtgtagcaattgcaagggtatatcgccaacttacagaaaagatcgattcgtaaaaatc
tttcgaaaagatttaagcccgaaagaaaaggcaaagatgtcactggcaaacattcaagca
aaaaacgctgtcaccactctgagggagagagaaaagcgtaaggccgatggagactttgac
gaaggcattgctgatatcgacttgtcatcaaatgagtccaacgaagacgaggaaggcgac
ggggaagaccttgatgttgacggggacgtagtaatgggcgataccgcgacgaagacagca
agaagctcaaaatccaaggtagccgcaaccccgcagatctactgcaaccccatggaggtg
aaggcggagttgattttattattcgagaacgagcaggaaatactttcgcttgtgtacaat
tcaaggtcgactgtgaaaaaggcggcggtggtttcaccagatatgttcttcatgcaaaca
cttttggtgcctccgaacaagtttcgtcccgaggcgaagacaggagctggagaaattaca
gaaaaccctcagaacacgttgtataaatcgatcttgaggggctgtcttctagtgtctcag
atctatgatgaagtcaatgggcttacagaggagacgccctatcggatcagagatttcggt
gatctacaagagtcgtgggctgggctccaggacgctgtcaactctttgatagaccgagat
cgcaatccaatccagggtgcggctggcaaaaagaacgaggacgggataaagcagaagctg
gagaagaaggagggtctcttcagaaagaacatgatgggcaagcgtgtcaactttgctgca
cgcagtgtcatttccccggatccaaatatcgagaccaacgagattggcgtaccgccggtg
tttgcaaagaagttgacctaccccgaacctgtcaccagccataacttcaaagaattgcaa
caagctgtgataaacggaccagatatatggcctggtgctcaggcaatagaaaacgaacac
ggtcaagtcataagcttgacaataaaaacgccagacgagaggttagctcttgctaatcaa
cttctagcgccgtcaaacaacagggccaacgggtctcgaaacaagaaagtgcatcgccat
ctgaccaacggtgatgttgttttgatgaatcgccagcccactttgcacaagccttctatg
atgggtcatcgtgctagagtcctcacaggcgagaagactattcgcatgcactatgccaac
tgcaacacttacaatgcagattttgatggagatgagatgaacatgcactttccacagaat
gaagttgctagggctgaggtattgcagattgcggatactgaccaccaatatcttgcggga
actttcggaaagccgctgcgtggtctcatccaagatcatatctctgtctctgtttggatg
tgtagtagagacacgtttttcgatcgagcgacgtatcaacaattgatatataacagcttg
cggccggagagtggtcacattgttggtgatagaatagagaccgtgactccagccattatt
aaaccgaaaccattatggacgggaaagcaggttattacgactatactcaggaacattaag
cctgttgattgcgcaccactaggcttgaatagcaagccatcagttcccggtgatcgctgg
ggctcggattcgaacgaggatcgagtgctttttaaaggtggcgaatttatcactggcatc
ttggataaagctcaaattggacctagtggtggaggattcatccatgccattcatgaggtc
tatggccctaccgctgccggcaagactctcagtatactcggtcgcttacttactaaattc
ctgcatatgagagcctttacttgcggcatggatgatttacggttgactcctcggggcgaa
caagcccggagagacacgctaaaagaagcacatcgccttggtctcgaggttgcatcaaaa
tatgtcagtttgcaggaccagaaacccaccgataccgacgctgagttgatggagcggatg
gaggacgttctgagggacgacagcaagcaaggcggtctcgatgtgatgatgaatgcaagg
tcgggaaatctgtcttcacagattaccaaagcctgcctgccggatggattggtcaaacag
tttccaaagaaccagatgcagaatatgacagtttccggagcaaaaggaagcgcggtgaac
gcaaacctgatttcttgcaatcttggtcagcaagttttggaaggtcgtcgtgtgcccgtc
atggtcagtgggaagtcgctgccttgcttcaggccttacgaaactaatatccgtgccggt
ggttacatcgtgaatcgtttcttgtccggtatcagaccccaagaatactatttccatgcc
atggctggaagagaggggttgatcgatactgctgtcaagacatccagatctggatatctg
caaagatgtctcataaaaggcatggaaggactcaaagttgagtacgatacctctgttagg
gattctgatggctccatggtgcaatttctctatggagaagacggtctcgacgtgacgaaa
caggtacatcttcaggatttcaagttcttactcgaaaacattacatccgaactttcgcaa
ctaaactatggtgatccgaattacgagcagattttcagtgaaaaggaaatcatactcaaa
aagatgaaaaaggctttgaagtactcgaaggcaaacgatcccaacggaccagatcctgta
ctatcctctttcaatcctggcaagtacggctatgcaacttcggagaaattctacgacgcc
cttacgaattatcttaaagccaacccggatggaatggtgaaagacaaagagcatcccgat
ggtgtaggcgttcgtaaggcgttggaaccggttttaatggctaagtatttgaagtccgtc
gtcgatccaggtgaggccgtgggaattgtcgctgggcagtctgttggtgaaccctcaacg
cagatgacacttaacacattccatttagcaggtcactccaccaaaaatgtcaccttgggt
attccccgcttaagagaaatcgtcatgacagccagtaatcacatctcaactccctcaatg
acccttcgtgtcaatgacgaattgtcagcagaggatggcgagaaattcgcgaagggtata
agtgtcttgtcgcttggtgaagtcttggatgaggccacagttaaggagcgggtggggcga
ggtgttgccttttctgaggccaggatatacgaagttcaggtcaaactcttccctagtaaa
gagtatattgatacgtatgcaattacagttgctgatgtcttacacacactggagaagaag
tttgcgccaaaactacaagccctcactcgtagagctctaggaagaaaaaaggaggaaaag
tcttcgaagtccaccaaaggcggagtgccagagattgggaagtctgttggtgcaatcgag
gaccctgcggcggcaacccgtagagggtccgaggatccacaagcagaagatgaggatgat
gatatcgaggaagacgacgcaaagcaggtcaacgcaaatgcgcttgtgagctatgcagag
aatgatgaggaggacgatcaagtgcaagctcaaatgcaaaaggattcagagcaagatgat
gctgacgtcccagacatggaggacgagggaattggagggagcccccgggaacctgacagc
gatggtgaagggcagcagaaggtcgaccgtcaagaacaacgtgctacagaagcttcggcg
gagcgagaagctcgcgtgatgaaaaactgttcagatgttgtccgtttccgctttgacgag
gaagctggggagtggtgtgatatcactctcgagtatgctgctgatgttcctaagattttg
atgatgacagtcgtcgaagatgctctgcgacaatgcctcattcagcagattccaggactt
ggtgcctgcaactacatccccaaccaagactcctcaaagtatggcaacaaaatccacttg
cctgtcgtccaaacggttggggtcaatcttaaggcaatgcagacttatcctcacatcata
aacccaaataccatttccacgaatgacattgcggcaatgcttgcgaactacggcgtcgag
gcctgccgcgcgaccataattcaggagctcgcgggcgtcttcggcggtcacgccatcagt
gtcgacaacagacatctaaacttaatcgccgatttcatgactaggggaggaggtttcagt
ccgttcaaccgcaacgggcttagagggagtgtcagtccgttcatgaaaatgagtttcgaa
acaacggttggcttccttgcggacgccgtcgcagatggagacttcgatgatttgagcaat
ccaagttcaagaattgtagttgggcgaatgagtaaagttgggactggcgcttttgatgtc
ctgacgaaggtacctaccgtgagaagtgacgaggagagttga
DBGET
integrated database retrieval system
