Glarea lozoyensis: GLAREA_10127 Help Entry GLAREA_10127      CDS       T04883                                  Name (RefSeq) TPR-like protein   KO K12600   superkiller protein 3 Organism glz  Glarea lozoyensis Pathway glz03018   RNA degradation Brite KEGG Orthology (KO) [BR:glz00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     GLAREA_10127  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:glz03019]     GLAREA_10127 Messenger RNA biogenesis [BR:glz03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ski complex      GLAREA_10127 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_19 TPR_16 TPR_22 TPR_14 TPR_2 TPR_1 TPR_17 TPR_CcmH_CycH TPR_8 TPR_11 TPR_12 TPR_9 ARM_TT21_N ARM_TT21_5th ANAPC3 TPR_7 TPR_6 ARM_TT21_C TPR_Slam TPR-S T7SS_EccA1_N SNAP DUF5588 TPPII_C Motif Other DBs NCBI-GeneID:  19469174 NCBI-ProteinID:  XP_008078368 UniProt:  S3E7W7 LinkDB All DBs Position Unknown AA seq 1425 aa AA seqDB search MSAKAALKSIITAIKAEKYDDAIKDAEKLLASDAKNYQANLLLGFALNKQGDYVQAEKAY DAATKLKRDDPNPWQGLIQLYERQGSPAVGKYQIAALQLAELYQKTEEKHKCQDVVDKFL GFAKSQGTRLQHKKAQEIILPGSPIYDFLEGRVPRPGYTYQIMAQITEFDEKERINKEIG ERRTRLGAKIGQVTAEVKREVLKDSDLEDLYEQVIDWVTDDDLRRQYEEKLIERCVEALE VLPPGEEKNSKRSKAQKLARDMVIIKHPFKLAWDIALEWQDTENISDLDPNVLREYYEFF PASGLGQVLRAYMGCEISSFPAPAPRTTPAPQETTASDESEDDDDQGGGVSLDEQMLAED RLILMSEGISEAGKSILAHRLMGEYYQFLEEHESVVELMRNAQHLVKTEGEKTGLSFAHS LRAITTLLATGLVFYQSPKNHPAAKSLFDKLLEQNPTLTPALIGIGLIYEEEEDYAAAVD FLGRALKKDPDNVRIRAEAAWVKALSGDYVAGKSDLERCVPKIDGKDTRSKDLLAQCQYR LGVCIWNIDSSKSARKDRNGAYAYFLAALKSNLNFAPAYTSLGIFYADYTNDKKRSRKCF QKAFELSPSEVEAAERLARIFAEQSDWDLVEVVAQRVVESGKVRPAPGSKKKGISWPFAA LGVAELNKQDYSKSIVSFQSALRISPDDYNSWVGLGESYHNSGRYIAATKAFQHAERFEE EITRQKSGETWFAKHMLANVKRELGEYDEAIEGYQSVLEEHPTEFGVSIALIQALVESAW DGIEKGLFGYAANRASETIDAAINLTNTGAADAFNLWKAVGDACSIFSWVQDRLPEFPSS NVKYLLRLEPEREAYKLFADVDGVDTDVVLADGIFAKGHQKGVNLTRCLHGAILSHKIAV HSSAQDIHAQAVAYYNLGWAEHRAHVCLGESLKKKSSKYLKAAVRCFKRAIELEAGNSEF WNALGVVTSVLNPKVAQHSFVRSLFLNERSPHTWTNLGTLYLLQNDMGLANEAFTRAQSS DPEFAHAWVGQGLLALLMTGDVREANLLFTHAIEISESSSLITKRQYSQSTFDQILATSS IASVTDLVQPLFALNQLQAMMPTDLAHSHLSTLFSERINDVASTVENLSKICSIVEADYE VTESPSSLSRFALAKADLARSQLAAGAYAAAIDSGETSLELSADDAGNELTAEDRKKCRL SAHLTVGLAHYYNKSHAKALELFKPALEESNGNPDAVCLLAQVLWANGDEPSKTQARDLL FDCVESHPNHVQSVILLGVIALLDQDDESLEAVSSTLQELRATHSITDLEISQVSEILRA TAALSSNDDADQAVLAEIQTDILLHPNQPYGWSRLAELAESDNEVAETALVTAVKAVPPR GQLEGADLASVFAGTGKVGDAQKAVMFAPWRRDGWDVLGGVLEGK NT seq 4278 nt NT seq  +upstreamnt  +downstreamnt atgtccgcaaaagctgcgctgaagtcgattattacggccatcaaagcagaaaaatatgat gatgctatcaaagatgccgaaaagttgctggcctcagatgccaagaattatcaagctaac cttcttctcgggtttgcgttgaataaacaaggcgactatgtacaggccgagaaggcatac gatgcggcaaccaagctcaagagggacgaccccaatccgtggcaaggcttaatacaacta tacgagagacaaggcagtccggcggtagggaaatatcagattgcggcattgcagctggca gagttataccagaaaacggaagagaaacataaatgtcaggatgtggtggataaattcctt ggtttcgcaaagagccagggaacgcgacttcagcataagaaagcccaagagataattctg cctggatctccgatatacgactttctcgaaggcagagtgccgcgccctggttatacatat cagatcatggctcagatcaccgagtttgatgagaaagaacgaatcaataaagagattggt gagaggcgaaccagactcggtgccaaaattggccaggtaacagcagaagtcaagagggaa gtgctcaaagatagtgacttggaggatctctatgagcaggtcattgactgggtcactgat gatgatcttcgccgacaatacgaggaaaagctcattgagagatgcgtcgaagctctagaa gttctcccgccgggagaagagaagaattcaaaacgatccaaggcgcagaaactagccaga gacatggtgatcatcaaacatcccttcaaattagcatgggatattgccttagaatggcag gacacagaaaatatctcagatttagacccaaatgtgctccgtgagtactatgaattcttc cctgccagcggtctgggacaagttttgagggcttacatggggtgtgaaatatcatccttt ccagctcccgccccgcggacgacacctgctcctcaagaaaccacagcatctgatgagagt gaggatgacgacgaccaaggaggaggggtatcattagatgagcagatgcttgcggaggat aggctgattctcatgagcgagggtatctcggaggctggaaaatcaatcttggcgcacaga ctaatgggtgaatactatcagttcctcgaagaacatgaaagtgttgttgagctgatgcga aatgctcaacatctcgtgaagactgaaggtgagaaaactggtctatcatttgctcattct ctgcgggccattacaacactccttgctactggccttgtcttctatcaatcgccaaagaac caccctgcagctaaatctttgttcgacaagcttcttgagcagaacccgactttgacaccg gcgttaatcggaattggattgatatatgaagaagaggaggattatgcagcggctgttgac ttcctcggacgtgcacttaagaaagatcctgataacgttcggatcagagccgaggccgcg tgggtgaaggctctcagcggtgactacgttgccggaaaaagtgatctggagagatgtgtt ccgaagatcgatggaaaagatacgcggtcaaaagacctccttgcccaatgccaatatcga ttgggtgtttgcatatggaatattgactcttcaaagtcagcgagaaaagaccgaaatgga gcctacgcttactttttggctgcattaaagagcaatctcaatttcgctccggcttacact agcctcggaatcttttatgcggattatacaaacgataagaagaggtctaggaagtgtttt caaaaggcgtttgaactttcaccatccgaagtcgaggcagctgagcgattagctcgcata ttcgctgagcagagcgactgggacctcgtagaagtggtagctcagagggtggtggaatcc ggaaaagttaggccggcaccaggatcgaagaagaaaggtatcagctggccatttgcagct ttaggtgttgcggaacttaacaaacaagactattcgaagagtatagtgtcattccagtcc gctcttagaatatccccagacgattataactcttgggtcggtttgggagagagttaccac aattccgggcgatacattgcggctaccaaagcatttcaacatgccgaaaggtttgaagaa gaaataacgaggcagaaatcaggagaaacttggttcgcaaagcatatgctcgctaatgtc aagagggaacttggcgaatacgatgaagccatcgagggataccagagtgtactagaagag catcctaccgaatttggggtttccatcgccttaatccaagcccttgtcgaaagcgcatgg gatggtattgaaaaaggtctcttcggttatgctgcaaatcgcgcctcggagactatcgac gcagctatcaaccttacgaatactggcgctgccgacgctttcaatctgtggaaagcagtt ggagatgcctgctcaatattttcttgggtccaggatcgacttcctgaatttccgtcatca aacgttaagtacctcttgagacttgaacccgaacgggaagcctacaagttatttgcagat gttgacggtgtggacaccgatgtagttcttgctgatggtatcttcgccaagggtcaccaa aaaggtgttaatcttactagatgccttcatggagctatattgtcccataaaatagccgtc cattcctcggcacaagatatccatgcccaggctgtcgcctattacaacctgggttgggca gaacatcgagcccacgtttgtctaggcgaaagtctcaagaaaaagtccagcaaatacctc aaagctgcagtccgttgtttcaagcgagccattgagttggaagcaggaaactcagaattc tggaatgcacttggagttgtgaccagcgtattgaaccccaaagtcgctcagcactctttc gtacgaagtttatttttaaacgagcgcagtcctcacacgtggacgaacctgggcacgctg tatcttttgcaaaacgatatgggtcttgcaaatgaagcttttactcgagctcagtcaagt gatcctgaatttgctcacgcctgggttggacaaggtctcttggcacttttgatgactggt gatgtccgagaggcgaatctgctattcacccacgccattgaaatctcggagtcatcttcc ttgatcacaaagcgacagtattcgcagtcaacattcgaccagatacttgctacatcttct attgcaagtgttacagaccttgttcagcctctgttcgccttaaatcagttgcaggcgatg atgcctactgatttggcacattctcatctatctaccctcttttctgagcgaatcaatgac gtcgcatccaccgtcgagaatctatcaaaaatctgctctattgtcgaggcggattatgaa gtcactgaatcaccttcatcactttctagatttgccctagcaaaagcagacctggcgcgt tcacaactcgcagcaggcgcatacgcagccgcgattgatagtggtgaaacctctctcgag ttaagtgccgatgatgcgggtaacgaactcaccgctgaagaccgcaagaagtgcagatta tcagcccacttgactgtcgggttagcacattactacaacaaatctcatgctaaagctctg gaacttttcaaacctgcactggaagaatccaacgggaatccagatgccgtatgccttctt gcacaggtattatgggcaaatggagacgagccttcgaaaacgcaagctcgcgatcttctc ttcgactgcgttgaaagccatccaaatcatgtacaatcagtcatattactaggagtcatc gccctgcttgatcaagacgatgaatctcttgaagcagtctcctcaaccctccaagagcta cgtgcaactcattccatcaccgacttagagatatcacaagtcagcgaaattctacgcgcc actgccgccttgtcatccaatgatgacgccgaccaagctgtcctcgcggaaatccaaaca gatatcctccttcacccaaaccagccctatggctggagtcgtctcgccgaactcgcggag tcggataatgaagttgctgagacggcattggtcacagctgtcaaagcggttcctccccgt ggtcaacttgaaggcgcggatcttgcgagtgtgtttgccgggacggggaaagttggagac gcacagaaggcagttatgtttgcgccgtggaggagagatgggtgggatgttcttggtggg gttttggaggggaaatga

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