Globicephala melas (long-finned pilot whale): 115840622
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Entry
115840622 CDS
T11080
Symbol
STX5
Name
(RefSeq) syntaxin-5 isoform X1
KO
K08490
syntaxin 5
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115840622 (STX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115840622 (STX5)
Membrane trafficking [BR:
gmf04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
115840622 (STX5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
DUF16
Vac_Fusion
MCPsignal
YwqH-like
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
115840622
NCBI-ProteinID:
XP_030689715
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Position
8:8891589..8920074
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AA seq
355 aa
AA seq
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MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGTSSSDIAPLPPPVALVPPLPDTMSCRDR
TQEFLSACKSLQSRQNGIQTNKPTLRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAK
RKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQ
SKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESRAS
GDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEET
IQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcggaaacgctacgggtctaagaacacggatcagggtgtctacctgggtctc
tcaaagacacaggtcctgtcccctgcaactgctggcactagcagcagcgacatcgcccct
ctgccccccccagtggccctggtccctccccttcccgacaccatgtcctgccgggatcgg
acccaggagttcctgtctgcctgcaagtccctgcagagccgtcagaatggaatccagaca
aacaagccaactctgcgtgctgtccggcagcgcagtgaattcaccctcatggccaagcgc
attgggaaagacctcagcaacacatttgccaagctggagaagctgacaatcttggcaaag
cgcaagtccctctttgatgataaagcagtggaaattgaggagctaacttatattatcaaa
caggacatcaacagccttaacaaacaaatcgcccagcttcaagatttcgtgagagccaag
ggcagccagagcggccggcacctgcaaacccattccaacaccatcgtggtctccctgcag
tcaaaactggcctccatgtccaatgacttcaaatcagttttagaagtgaggacagagaac
ctgaagcagcagaggagccggcgggagcagttctcccgggcacccgtgtcagccctgccc
cttgcccccaaccacctagggggcggtgctgtggttttgggggcggagtctcgagcctct
ggggacgtggccattgacatgatggactctaggaccagccagcagctgcagctcattgat
gagcaggattcctacatccagagccgggcagacaccatgcagaatattgagtccacaatt
gttgagctgggctccatcttccagcagttggcacacatggttaaggaacaggaagaaacc
attcagaggatcgacgagaacgtgctgggagcccagctggatgttgaggccgcccactca
gagatcctcaagtacttccagtcggtcacctccaaccggtggcttatggtcaaaatcttc
ctcatcctcattgtgttcttcatcatctttgtggtcttccttgcctga
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