Globicephala melas (long-finned pilot whale): 115849550
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Entry
115849550 CDS
T11080
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X2
KO
K09447
interferon regulatory factor 7
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04620
Toll-like receptor signaling pathway
gmf04621
NOD-like receptor signaling pathway
gmf04622
RIG-I-like receptor signaling pathway
gmf04623
Cytosolic DNA-sensing pathway
gmf05160
Hepatitis C
gmf05161
Hepatitis B
gmf05162
Measles
gmf05164
Influenza A
gmf05167
Kaposi sarcoma-associated herpesvirus infection
gmf05168
Herpes simplex virus 1 infection
gmf05169
Epstein-Barr virus infection
gmf05203
Viral carcinogenesis
gmf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115849550 (IRF7)
04621 NOD-like receptor signaling pathway
115849550 (IRF7)
04622 RIG-I-like receptor signaling pathway
115849550 (IRF7)
04623 Cytosolic DNA-sensing pathway
115849550 (IRF7)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
115849550 (IRF7)
09172 Infectious disease: viral
05161 Hepatitis B
115849550 (IRF7)
05160 Hepatitis C
115849550 (IRF7)
05164 Influenza A
115849550 (IRF7)
05162 Measles
115849550 (IRF7)
05168 Herpes simplex virus 1 infection
115849550 (IRF7)
05167 Kaposi sarcoma-associated herpesvirus infection
115849550 (IRF7)
05169 Epstein-Barr virus infection
115849550 (IRF7)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
115849550 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115849550 (IRF7)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115849550 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
115849550
NCBI-ProteinID:
XP_030706816
LinkDB
All DBs
Position
8:complement(357745..362991)
Genome browser
AA seq
490 aa
AA seq
DB search
MAVAPDGGTPRVLFGDWLLGEVSSGRYEGLRWLDAARTCFRVPWKHFSRKDLGEADSRIF
KAWAVARGRWPLRSSAGARPTAESALRASWKTNFRCALHCTRRFVMLQDNSGDPTDPHKV
YMVTPGPACGESPSIISQGEDKALEDAPPTRDGLLGPYLAADAGERLGHGLAGLSPEPCA
PSPAGDAGDLLIQALQQSCLEDHVLKAACGVEPIAPGAPDTGPPPAPWQPREAEPRTTAS
PSACTLMAGHLHVAGPTCSQLGLHTLPSLGALDLTITYKGRTVLREVVGRPSCVLLYGPP
DVGGGASEHQRVAFPSPAELPDQKQLHYTEKLLQHVAPGLQLELRGLRLWARRLGKCKVY
WEVGGPLGSASSSTPARLLPRNCDTPIFDFSTFFQELGEFEACRRRGSPHYTIYLGFGQD
LSVGRPKEKSLVLVKLEPWLCRAYLEGVQREGASSLDSGSLSLCLSSSNSLYDDLEHFLE
HFLMEAEQPG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggctcccgacggggggaccccgcgcgtgctcttcggagactggcttctgggc
gaggtcagcagcggccgctacgagggactacggtggctggacgcggcccgaacgtgcttc
cgcgtgccctggaagcacttttcgcggaaggacctgggagaggccgactcgcgcatcttc
aaggcctgggctgtggcccgcggcaggtggcctctccgcagcagcgcaggtgcccggcct
accgctgagagtgcgctccgagcttcctggaaaaccaacttccgctgcgcgctgcactgt
acgcggcgcttcgtgatgttgcaagacaactcgggggaccctaccgaccctcataaggtg
tacatggtcacccccgggccggcgtgcggagaaagcccaagcattattagccagggggag
gacaaggcccttgaagatgccccacctacaagggatgggcttctggggccatacctggca
gcagatgctggcgagaggctggggcatgggctggccgggctgagccctgagccctgtgcc
ccaagcccagctggagatgctggggacctattgatccaggctctgcagcagagctgcctg
gaggaccatgtgctgaaagctgcgtgtggggtggagccgatagcccctggggctcctgac
acaggcccacccccagccccctggcagccgcgagaggcggagccccgcaccacagcctcc
cccagtgcctgcaccctgatggcagggcatctacacgtggctggtcccacctgctcacag
ctcggtctgcacacactgcccagcttgggggccctggacttgaccatcacgtacaagggc
cgaacagtgctgcgggaggtggtggggcgcccgagctgtgtgctcctgtacggccccccc
gatgtaggtggtggggcttcagagcaccagcgagtagcctttcctagccccgccgagctg
cccgaccagaagcagctccactacacagagaagctgctgcagcacgtagcccccggccta
cagctggaactccggggtctcaggctgtgggcccggcgcctgggcaagtgtaaggtctat
tgggaggtgggagggcccctgggctcggccagctcctccacccccgcccgcctgctgccc
cggaactgcgacacccccatctttgacttcagcaccttcttccaagaactgggggagttt
gaggcctgccggcgccggggctcccctcactacaccatctatctgggctttgggcaggac
ctgtcagtgggaaggcccaaggagaagagcctggtcctggtgaagttggagccatggctg
tgccgggcatacctggagggcgtgcagcgcgaaggcgcgtcctctctggacagcggcagc
ctcagcctctgcctgtccagctccaacagcctctatgatgacctggagcacttcctggag
cacttcctgatggaggcggagcagcccggctag
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