Globicephala melas (long-finned pilot whale): 115850999
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Entry
115850999 CDS
T11080
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
115850999 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmf04040
]
115850999 (SCN2A)
Ion channels [BR:
gmf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115850999 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
FraC
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
115850999
NCBI-ProteinID:
XP_030708416
LinkDB
All DBs
Position
7:complement(66127716..66276753)
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AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSL
DGNGTTFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVHKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRPSNVSQASRASRVLPVLPVNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTAKQRATSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGDGTPIKEDILTDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgagcaacgcattgcagaagagaaagctaagagacccaaacaagaa
cgcaaggatgaagatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggacccctactatatcaataagaaaacgtttatagtattgaataaagggaaagcaatc
tctcggttcagtgccacccctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctt
accaactgtgtatttatgaccatgagtaatcctccagactggacaaagaatgtggagtac
acctttacaggaatttacacttttgaatcacttataaaaatacttgcaaggggcttttgt
ttagaagatttcacatttctacgggatccgtggaattggttggatttcacagtcattact
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtcttgagagctttgaaaactatttctgtaattccaggcctgaagaccatcgtgggcgcc
ctaatccagtcagtgaagaagctctcagatgtaatgatcctgactgtgttctgtctgagc
gtgtttgcactaataggattacagctgtttatgggcaacctgcgaaacaaatgtttgcaa
tggcccccagataattcttcctttgaaataaacatcacttccttctttaataactcattg
gatgggaatggtaccactttcaataggacagtgagcatgtttaactgggatgaatatatt
gaagataaaagtcacttctattttttggaagggcaaaatgatgctctgctttgtggcaac
agctcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtagaaacccc
aactatggctacacaagcttcgacacctttagctgggctttcttgtccttatttcgtctt
atgactcaagacttctgggaaaacctttatcaactgacattacgtgctgctgggaaaaca
tacatgatattttttgtgctagtcattttcttgggctcattctaccttataaatttaatc
ctggctgtggtggccatggcctatgaggaacagaatcaggcaacgctggaagaggctgaa
cagaaggaagctgaatttcagcagatgcttgaacaattaaaaaagcaacaagaagaagct
caggcagcagctgcagcagcatctgctgaatcaagagacttcagtggtgctggtgggata
ggggttttctcagaaagttcttcagtagcatcaaagttgagctccaagagtgaaaaagag
ctgaaaaacagacggaagaaaaagaaacagaaagaacagtctggagaagaagagaaggaa
gatggggtccacaaatctgaatctgaagacagcataagaagaaaaggtttccgtttttcc
ttagaaggaagcaggctgacatatgaaaagaggttttcctctccacaccagtctttattg
agcatccgtggctcccttttctctccaagacgcaacagtagggcgagccttttcagcttc
agaggtcgagccaaggatattggctctgagaatgactttgccgatgatgagcacagcacc
ttcgaagacaatgacagcagaagagactctctgtttgtgccgcacagacacggggagcgg
cgccccagcaacgtcagccaggccagccgcgcctccagggtgctccccgttctgcccgtg
aacgggaagatgcacagtgctgtggattgcaacggcgtggtctccctcgtcgggggccct
tctgctctcacatctcccgctggacagctcctgccagagggcacgactactgaaacggaa
ataagaaagagacggtccagttcttatcatgtttccatggatctgttggaagatcctaca
gcaaagcaaagagcaacgagtatggctagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccctgctggtataaatttgctaacatgtgcttgatttgg
gactgctgtaagccatggttaaaggtgaaacatctcgtcaacttggttgtgatggaccct
tttgttgacctggccatcaccatctgcattgtcttaaataccctcttcatggccatggag
cactatcccatgacggagcagtttagcagtgtgctgtcagtcgggaacctggtcttcact
gggatcttcacagcagaaatgtttctaaagataattgccatggatccatattattacttt
caagaaggctggaatatttttgatggtttaattgtgagccttagtttaatggaacttggt
ttggcaaacgtggaaggattgtcagttctccgatcatttcgactgctcagagttttcaaa
ttggcaaaatcttggccgactctgaacatgctgataaagatcattggcaattcagtgggg
gctctgggtaacctcaccttggtgttggccatcatcgtcttcatttttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatttccaatgattgtgaa
ctcccgcgctggcacatgcatgacttcttccactccttcctgattgtgttccgagtgctg
tgtggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaaaccatgtgc
cttactgtcttcatgatggtcatggtcattggaaacctggtggttctgaacctcttcctg
gccttactcttgagttcgttcagttctgacaatcttgccgccactgatgatgataatgaa
atgaataatctccagattgctgtgggaaggatgcagaaaggaattgattatgttaaaaga
aaaatacgtgaatttattcagaaagcctttgttcgaaagcagaaagctttagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccataccaccata
gaaataggcaaagacctcaattatctcaaagatggaaatggaacgaccagtggcataggc
agcagtgtagaaaaatatgttgtggatgaaagtgattacatgtcctttataaacaacccc
agcctcactgtgactgtaccaattgctgtcggagaatctgactttgaaaatttaaatact
gaagaattcagcagcgagtcagatatggaggaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcactgttgacataggagctcccgctgagggagaacaacctgaggtt
gaacctgaagaatctctggaacctgaagcctgttttacggaagactgtgtgcggaagttt
aagtgttgtcagataagcatagaagaaggcaaagggaaactctggtggaacttgagaaaa
acttgctataagatagtggagcataactggtttgaaaccttcattgtcttcatgattcta
ctcagcagtggggcactggcctttgaagatatatatattgaacagcgaaaaaccattaag
accatgttagaatatgctgacaaagttttcacttatatattcatcctggaaatgcttctc
aagtgggttgcatacggctttcaagtgtattttaccaatgcctggtgctggctagatttc
ctgattgtcgatgtctcattggttagcttaactgcaaatgctttgggttactcagaactt
ggtgccatcaaatccctcagaacactaagagctctgaggccattgagagccttatcccgg
tttgaaggaatgagggttgttgtcaatgctcttttaggagccattccatccataatgaat
gtacttctggtttgtctgatcttttggttaatattcagtatcatgggagtgaatcttttt
gctggcaagttttatcactgtattaactacaccactggagaaatgtttgatgtcagcgtg
gtcaacaactacagtgagtgtaaggccctcatagagagcaaccaaactgcccggtggaag
aacgtgaaagtcaattttgataatgtgggactcgggtatctttctctacttcaagtagcc
acatttaagggatggatggatatcatgtatgcagctgttgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtatctttattttgtcatctttattattttt
ggttcattctttactctgaatcttttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaactgggttcaaagaaaccacaaaagcccatacctcgacctgctaacaaa
tttcaagggatggtctttgattttgtaaccaaacaagtctttgatatcagcatcatgatc
ctcatctgcctcaacatggtcaccatgatggtagaaactgatgaccagagtcaagaaatg
acaaacattctgtactggattaatctggtgtttattgttctgttcactggagaatgtgtg
ctgaaactaatctctcttcgttattactatttcaccattggatggaatatttttgatttt
gtggtggtcattctctccattgtaggtatgtttctggctgagctgatagagaaatatttt
gtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgaatcctgcgtctg
atcaaaggggccaaggggatccgcacactgctctttgctttgatgatgtcccttcctgcg
ttgtttaacatcggcctcctgctctttctggtcatgttcatctacgccatctttgggatg
tccaacttcgcctatgttaagagggaggttggaattgatgacatgttcaacttcgagacc
tttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggatggattg
ctagcacctattcttaatagtggacctccagactgtgaccctgaaaaagatcaccctggc
agctcagttaagggagattgtgggaacccatctgtggggatcttcttttttgtcagttac
atcatcatatcatttctggtcgtggtgaacatgtacatcgctgtcatcctggagaacttc
agtgttgctactgaagaaagtgcagagcccctgagtgaggatgactttgagatgttctat
gaggtttgggagaagtttgatcctgatgccacccagttcatagagttctccaagctctct
gattttgcggctgccctggatcctcctcttctcatagcaaaaccaaacaaagtccagctc
attgccatggatctgcccatggtcagtggggacaggatccactgcctcgacattttattt
gcctttacaaagcgtgttttgggtgagagtggagagatggatgcccttcgaatacagatg
gaagagagattcatggcatcgaacccctccaaagtctcctatgagcccattacaaccact
ttgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcttatagacgctac
ctcttgaagcaaaaagttaaaaaagtttcatgtatatataagaaggacaaaggtaaagaa
ggtgatgggacacccatcaaagaagatatcctcactgataaactaaatgagaattcaact
ccagagaaaaccgatgtgacaccttctaccacgtctccaccttcctatgacagtgtgaca
aaaccagaaaaagaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa
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integrated database retrieval system
