Globicephala melas (long-finned pilot whale): 115853397
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Entry
115853397 CDS
T11080
Symbol
TMTC4
Name
(RefSeq) protein O-mannosyl-transferase TMTC4 isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gmf01003
]
115853397 (TMTC4)
Glycosyltransferases [BR:
gmf01003
]
O-Glycan biosynthesis
O-linked Man type
115853397 (TMTC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TMTC_DUF1736
TPR_2
TPR_8
TPR_16
TPR_17
TPR_11
TPR_12
TPR_14
TPR_19
TPR_10
TPR_CcmH_CycH
TPR_9
TPR_15
TPR_Slam
ARM_TT21_C
TPR_MalT
ARM_TT21_5th
NatA_aux_su
FAT
ARM_ECM29_C
Motif
Other DBs
NCBI-GeneID:
115853397
NCBI-ProteinID:
XP_030712666
LinkDB
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Position
18:complement(68816228..68878137)
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AA seq
780 aa
AA seq
DB search
MIVSRALGAPRKEQSTQVSTFWVSSQHNAGARGRRPAVFRMAEWDADLDHIIPSSILPPL
WAKLLVGFVSLVCFARSYDGDFVFDDSEAIVNNKDLRAETPLGDLWHHDFWGNQLSSNTS
HKSYRPLTVLVFRMNCYFSGGFHPLSFHVVNILLHSGISILLVDVFSVLFGGLQYTSRGR
RLNLAPRSSLLAALLFAVHPVHTECVAAVVGCADLLAALFFLLSFLGYCKALRETNKEGT
QSTFWVLLSILLGAVAMLCKEQGITVLGLNAVFDILAIGKLNVLELVRKVLHKDRSLENT
GVLRTEGLLFRMSLLALGGTGVLYVRWKIMGTGPPTFTEVDNPASFASSMLVRAINYNYY
YSLNAWLLLCPWWLCFDWSMGCIPLIKSVGDWRVIALAALWFCLIGLICQALCSEDSHKR
RILTLGLGLLIIPFLPASNLFFRVGFVVAERVLYLPSAGYCMLLTFGFGVLSKHTKKKKL
IAAFVLGILFINTLRCVIRSGEWRNEEQLFRSALSVCPLNAKVHYNVGKNLADKGNQTAA
IRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQN
SLKRFQAAEQSYRTAIKHRRKYPDCYYNLGRLYADLNRHVDALNAWRNATVLKPEHSLAW
NNMIILLDNTGNLAQAEAVGREALELIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKA
HPNTASYHGNLAVLYHRWGHLDLAKKHYEISLRLDPMASGTKENYGLLRRKLEQMQKKNV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgattgtctcccgtgccttgggggccccaagaaaggagcagtcaactcaggtctccaca
ttctgggtttctagccagcataatgctggagcaagaggccggcggcccgcagttttcagg
atggccgagtgggatgccgatttggatcacatcattccgtcttccattcttcctcctctc
tgggctaagttacttgtgggatttgtttccctcgtgtgtttcgcacgtagctacgatgga
gactttgtctttgacgactctgaagcaattgttaacaataaggacctccgagcagaaacg
cccctcggggacctgtggcatcatgacttctggggcaatcagctgagcagcaacacaagt
cacaagtcctaccgacccctcacggtgctggttttcaggatgaactgctatttttcggga
ggtttccaccccttgagtttccacgtggtcaacatcctcctgcacagtggcatctccatc
ctcttggtggacgtcttctcggtgctgtttgggggcctgcagtacacgagtaggggccgg
aggctaaacctggcccccaggtcgtccctgctggctgccctgctgtttgctgtgcacccg
gtgcacaccgagtgtgttgctgctgttgtcggctgtgcagacctcctggctgccctgttt
tttctgttatctttccttggctactgtaaagcacttagagaaactaacaaggaggggacg
cagtccacgttctgggtgttgctaagtatccttctgggagcagtggccatgctgtgcaaa
gagcaagggatcactgtgctgggtctgaatgccgtctttgacatcttggcgataggcaaa
ttaaatgttctggaactggtccggaaggtactacataaggaccgatcattagagaacact
ggcgtgctcaggactgagggcctcctcttcagaatgagtctcctggccttggggggaaca
ggggtgctctacgtgcgctggaagatcatgggcaccggccctccgaccttcaccgaagtc
gacaaccctgcctccttcgccagtagcatgctggtcagggccataaactataattactac
tattccttgaatgcctggttgctgctgtgcccctggtggctgtgttttgattggtcaatg
ggctgcatccccctcattaagtcagtcggggactggagggtaattgctctagcagcactc
tggttctgcctaattggcctgatatgccaagccctgtgctctgaagacagccacaagaga
cggatcctcacgctgggcctgggacttctcatcattccatttcttcctgcgagtaacctg
ttcttccgggtgggcttcgtggtggcagagagggtcctgtacctccccagcgctgggtac
tgcatgctgctgactttcggatttggagttctcagtaaacatactaagaaaaagaaactg
attgctgctttcgtcctgggaattttattcataaacacgctgagatgcgtgattcgcagc
ggcgagtggcggaacgaggaacagcttttcagaagcgccctgtctgtgtgtcctctcaac
gccaaggttcactacaatgtgggcaaaaacctggctgataaaggcaatcagacagctgcc
attagatattaccgggaagctgtgagattaaatccgaagtatgttcatgccatgaataat
ctgggaaatatcttaaaagaaaggaatgagctccaggaagcagaggagctgctgtctttg
gctgtacagatacagccagacttcgctgccgcgtggatgaatttaggcatcgtgcaaaac
agcctgaaacggttccaggcggccgagcaaagttaccgaacggcgatcaagcacaggagg
aagtacccagattgttactacaacctcgggcgtttgtacgcagatctaaatcgtcacgtt
gatgcgctgaacgcgtggaggaatgctactgtgctgaagccagagcacagcctggcctgg
aacaacatgatcatcctccttgataacacaggtaatttagcccaagccgaagctgtggga
agagaggcactggaattaatacctaatgaccactctctgatgttctccttggcaaacgtg
ctgggaaagtcccagaaatacaaggaatctgaagctttattcctcaaagcaattaaagct
catccaaatactgcaagttaccatggcaatttggctgtgctttatcatcgttggggacat
ctagacttggccaaaaaacactatgagatctctctgcggcttgacccaatggcatcagga
actaaggagaattatggtcttctaagaagaaagctggaacaaatgcaaaagaaaaacgtc
tga
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