Globicephala melas (long-finned pilot whale): 115859357
Help
Entry
115859357 CDS
T11080
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X2
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmf01009
]
115859357 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmf03021
]
115859357 (CTDP1)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
115859357 (CTDP1)
Protein phosphatases and associated proteins [BR:
gmf01009
]
HAD phosphatases
Fcp/Scp phosphatases
115859357 (CTDP1)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115859357 (CTDP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
Biotin_lipoyl
LIG3_BRCT
RTT107_BRCT_5
BSH_CusB
Motif
Other DBs
NCBI-GeneID:
115859357
NCBI-ProteinID:
XP_060166135
LinkDB
All DBs
Position
13:29421418..29462959
Genome browser
AA seq
940 aa
AA seq
DB search
MEAPPSGRVPAEGAQPPAVAEVRCPGPGPLRLLEWRVAAGAAVRIGSVLAVCEAAASAQP
TGPAPTRAGSGGCVRTERRLRSERAGVVRELCAQPGQVVAPGAVLVQLEGCSHPVVMKGL
CAECGQDLTQLQSKNGRPQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKL
VLMVDLDQTLIHTTEQHCPQMSNKGIFHFQLGRGEPMLHTRLRPHCKGFLEKIAKLYELH
VFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDD
REDVWKFAPNLITVRKYVYFQGTGDVNAPCGPREPQARRRGADATEQPPSVKDPEEGRQV
SGVEQSNGLGKPTRELNGGAGPRGGWPCPGQEEERGARPAACAPSADGRGPLAGTQQHGR
TPPEKRPVLGPVGPDPDPDVPSDSGSNSESEGRPSPIPSDGESGEKRTRRKPAATRHAGD
IVAQGSASGASPCMEPGPGVQAAVQGEGERDGLCGLGGGCADRREAETESQNSEQSGITV
GESLDQSAEEEEEEEDADADDHLVHLEEILARVHATYYARYDCFLRGETQDAPDIRKIVP
ELRSRVLADVAIIFSGLHPTNFPIEKTREHYHATALGARIVTQLVLEPGNPDRATHLIAA
RAGTEKVRQAQDSGQLHVVNPDWLWSCLERWDKVEERLFPLRGDPAKSQREDGPAAFPER
QGLLPATLFHPTPVHPKAPPGPEVRIYDASTGKLIRQGAAGPGPPGSLPVHAELSSFRAV
QPHHQQMFGEDLPANQDGEQPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEG
SDDSDSEKKKPGDREDRQRGPRPGQPEALGAPRGPTLRSAPPTERNAADGRGPRGHKRKL
NEEDAASESSGASSCEDEEGGSSEADEMAAALEAELGDLM
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaccgcccagcggccgcgttcccgccgagggcgcccagccgccggctgtggcc
gaggtgcgctgccccggccccggaccgctgcgcctgctcgagtggagggtggcggctggc
gcggccgtacgcatcggctctgtgctggccgtgtgcgaggccgccgcctccgcgcagccc
accgggcccgcccctactcgcgccggctccgggggctgcgtgcgcacggagcgcaggctg
aggtcggagcgcgcgggcgtggtgcgggagctgtgcgcgcagcctggccaggtggtggca
cccggggcggttctggtgcaattagaaggatgcagccaccccgtcgtcatgaagggcctg
tgcgccgagtgtggccaagacctgacccagctgcagagtaagaatgggaggccgcaggtg
ccgctgtccacggccaccgtgtcgatggtgcacagcgtccccgagctaatggtgagctcc
gagcaagctgaaaagctaggaagggaggaccagcagcgactgcatcgcaacagaaaacta
gtgctcatggtggacttggaccagaccttgatccacacgacggagcagcattgcccgcag
atgtccaacaagggcatattccacttccagctgggccggggcgaaccgatgctgcacacc
cgtctgcgtccgcactgcaaggggttcctggagaagatcgccaagctgtacgagctccac
gtcttcacgttcggcagccggctgtacgcacacacgatcgcaggcttcttagatcctgag
aagaagcttttttcacatcgaatattatcgagggacgaatgtattgacccgttttccaaa
acggggaaccttagaaatctgtttccttgtggagactccatggtttgcatcatcgatgac
cgagaagacgtgtggaagttcgcccccaacctgataactgtgaggaaatacgtgtacttc
cagggcacaggcgacgtcaatgccccgtgcgggccccgggagccccaggcgcggaggaga
ggtgccgacgccacggagcagcctccatccgtcaaggatcccgaggaaggaaggcaggtg
tctggggtcgagcagagcaacggcctcgggaagcccacgcgggagctcaacgggggcgca
ggccctcgggggggctggccctgtcccgggcaggaggaggagaggggcgctcggcccgcc
gcctgcgccccctctgctgacggccgggggcccctggcgggcacccagcagcacgggcgg
acgccgccagagaagaggcccgtgctgggtccggtgggccctgacccggacccagatgtc
cccagtgacagcgggagcaacagcgagtccgagggccggccgtcccccatcccctctgat
ggggagagtggggagaagaggacccggagaaagcctgcggccacccgccatgctggggac
atcgtggcccagggcagcgcctcgggcgccagtccgtgcatggagcccgggcccggcgtc
caggcggccgtgcagggggagggcgagcgggacggcctctgcgggctgggcggcggctgt
gccgacaggagggaggccgagacagagtcccagaacagcgagcagtcaggcatcacggtg
ggcgagtccctggaccagagcgcggaggaggaggaggaggaggaggacgccgacgccgac
gaccacctggtccacctggaggagatcctcgcccgcgtgcatgccacctactatgccagg
tatgactgctttctccgcggggagacccaggacgcccccgacatccggaagattgtcccc
gagctgcgcagcagggtgctggccgacgtcgcaatcatcttcagcgggctgcaccccacg
aacttccccatcgagaagacgcgggagcactaccacgccacggccctgggcgccaggatc
gtcacccagctggtgctggagcccggcaaccccgaccgggccacccacctgatcgccgcg
cgggccggcacggagaaggtgcgccaggcccaggattccgggcagctgcacgtggtcaac
cccgactggctgtggagctgcctggagcgctgggacaaggtggaggagcggctgttcccg
ctacgtggtgacccggccaaatcccagagggaggacggcccggccgcctttcccgagagg
cagggcctgcttccagccaccctgtttcatccaacacccgtgcatcccaaggccccgcct
ggccctgaagttcggatctacgacgccagcacgggcaagctcatccgccagggtgctgcg
ggccccgggccccccggctccctgccggtgcacgcggagctctcctccttcagagcggtc
cagccacatcaccagcagatgtttggtgaagacttgccagccaatcaagatggagagcag
cctggtccttctagaaggaagcggcagcccagcatgtcggagaccatgccactgtacacg
ctgtgtaaggaggacttagagagtatggataaagaggtggatgacatcctaggagagggc
agcgatgacagtgacagcgagaagaagaagccgggagaccgggaggaccggcagcgcgga
ccgaggcccgggcagcccgaggccctgggggccccgagggggcccacgctcaggtcagcg
ccacccaccgagaggaatgcagcagacggccgggggcccaggggccacaagaggaagctg
aacgaagaggacgcagccagcgagtccagcggagcgtccagctgcgaggacgaggagggg
ggcagctcggaggcggacgagatggcggccgcgctggaggccgagcttggcgacctcatg
tga
DBGET
integrated database retrieval system
