Globicephala melas (long-finned pilot whale): 115860827
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Entry
115860827 CDS
T11080
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115860827 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115860827 (PHF1)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115860827 (PHF1)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115860827 (PHF1)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115860827 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_2
Prok-RING_1
PHD_ash2p_like
Chromo
DUF4537
ASH2L-like_WH
Zn_ribbon_CLPX_N
Motif
Other DBs
NCBI-GeneID:
115860827
NCBI-ProteinID:
XP_030726927
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All DBs
Position
11:63028515..63033786
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AA seq
567 aa
AA seq
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MAQPPRLSRSGAPPLWDPASPAPTSGSRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
RSSRLLSALNSHKDRFISGREIKKRKCLFGLHARIPPPVEAPTGDGAPTSFPSGQGPGGG
VSRPLGKRRRPEPEPLRRRQKGKMEELGPPSAVRNQPEPQEQRERARLQRALQASVSPPP
SSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDGEPPDRSPLELHIG
FPTDLPKSAPHSMTASSSSVPAPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
PVRVLARRVRPDGSVQYLVEWGGGGIF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcccccccggctgagccgctctggtgcccccccactttgggacccagcttcc
cctgctcccacctcaggctccaggcctcgactttgggagggtcaagatgtgctggccaga
tggacagatgggctgctatacttggggaccatcaaaaaggtggacagtgctcgggaggtg
tgtctggtccagtttgaggatgattcccagtttctggttctatggaaagacatcagccct
gctgccctccctggggaggaactcctctgctgtgtatgtcgctctgagactgtggtccct
gggaaccggctggtcagctgtgagaagtgtcgccacgcttatcatcaggactgccacgtt
ccaagggccccagcccccggagagggagagggcacatcctgggtctgccgccagtgtgtc
tttgccatcgctaccaagaggggaggtgcgctgaagaagggcccctatgcccgggccatg
ctgggcatgaagctgtccctgccgtacggactaaaggggttggactgggacgccgggcat
ctgagcaaccggcagcagagctactgttactgtggtggccctggggagtggaacctgaag
atgctgcagtgcaggagctgcctacagtggttccatgaggcctgcacccagtgtctgagc
aagcccctcctctacggggacaggttctatgagtttgaatgctgtgtgtgtcgggggggc
cctgagaaggtccggaggctacagcttcgctgggtggacgtggctcatcttgtcctctac
cacctcagcgtttgctgtaagaaaaaatactttgattttgaccgtgagatcctccccttc
acctctgagaattgggacagtttgctccttggggagctctcagacacccccaagggagaa
cgttcttccaggctcctctctgctcttaatagccacaaggatcgtttcatttcagggagg
gagattaagaagagaaaatgcttgtttggtctccatgctcggatccctccccctgtggag
gcccctactggagatggagcccccaccagcttcccttcagggcagggccctgggggaggg
gtctcacgtcccctggggaagcgccggaggccggagccagagcccctgaggaggaggcag
aaggggaaaatggaggagctggggccaccctcagcagtgcgcaaccagcccgagccccag
gagcagagggagcgggctcgtctgcagagggcactgcaggcctcagtgtctccaccaccc
tccagccctaaccagagttaccagggcagcagcggctacaacttccggcccacagatgcc
cgctgcctgcccagcagtcccatccggatgttcgcttccttccacccctctgccagcacc
gcagggacctctggggatggtgaacccccagacaggtcacccctggaacttcacattggt
ttccccacagacctccctaaaagtgccccccactcgatgactgcctcatcttcctcagtc
ccagccccctccccaggtcttcctagacgctcagcacccccttctcccctgtgccgtagt
ttgtctcctggaactgggggaggagtccgaggtggggtcggctacctgtcccgaggggac
cccgtccgggtccttgctcggagagtacggcctgatggctctgtgcagtacctggttgag
tggggaggagggggcatcttctga
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