Globicephala melas (long-finned pilot whale): 115864150
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Entry
115864150 CDS
T11080
Symbol
SEMA4F
Name
(RefSeq) semaphorin-4F isoform X1
KO
K06521
semaphorin 4
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
115864150 (SEMA4F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gmf04090
]
115864150 (SEMA4F)
CD molecules [BR:
gmf04090
]
Proteins
115864150 (SEMA4F)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema4F_C
Sema
PSI
CbiM
CcmD
Motif
Other DBs
NCBI-GeneID:
115864150
NCBI-ProteinID:
XP_030733538
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Position
12:complement(25925009..25949471)
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AA seq
772 aa
AA seq
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MPASVARPRPRPGPSPASPLPLLLLLLEVLSGPVCGRVPPSVPRISLPISEADSYLTRFT
IPQTYNYSVLLVDPASHMLYVGARDTIFALSLPFSGERPRRIDWMVPEAHRQNCRKKGKK
EEECHNFVQILAIANASHLLICGTFAFDPKCGVIDVSSFQQVERPESGRGKCPFEPAQRS
AAVMAGGILYAATVKNYLGTEPIISRAVGRAEDWIRTEILPSWLNAPAFVAAVALSPAEW
GDEAGDDEIYFFFTEISRAFDSYEHVKVPRVARVCAGDLGGRKTLQQRWTTFLKADLLCP
GPEHGRASSVLQDMVILRPEHGAGTPIFYGIFSSQWEGAAISAVCSFRPQDIRTVLNGPF
RELKHDCNRGLPVMDNDVPQPRPGECITNNMKLQQFGSSLFLPDRVLTFIRDHPLMDKPV
FPADGHPLLVTTDTTYLRVVAHRVPSLSGKEYDVLYLGTEDGHLHRAVQIGAQLSVLEDL
ALFPEPQPVENMKLYQSWLLVGSRTEVTQVNTTNCGRLQSCSECILARDPVCAWSVRLAA
CVAHTGEHEGLVQDIESADVSSLCPQEPGEHPVVFEVPVATAAHVVLPCSPSSAWASCVW
HQPSGVTALTPRRDGLEVVISPGAMGAYACECQEGGAARVVAAYSLVWGSQRGAPSRAHL
VGAGLAGFFLGVFAASLTLLLIGRRQQRQRQRELLARDKVGLDLGVLPSGTTSYSQDPPS
PSPEDERLPLALAKRGSGFGGFPPPFLLDPCPSPPHIRLTGAPLATCDETSI
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgccggcctctgttgcgcggccccgcccgcgcccggggccgtccccggcctcgccctta
cccctgctgctgctgctgctggaggtgctaagcggcccggtgtgtggccgcgtcccccct
tcggtgcccaggatctcgcttcctatctccgaggctgactcctatctcacccggttcacc
atccctcagacatacaattactccgttctccttgtggatcctgcttcccatatgctttat
gtcggcgcccgggacaccatcttcgctttatccctgcccttttcaggggagagacctcgc
aggattgactggatggtgcctgaggcccacagacagaactgtaggaagaaaggcaagaag
gaggaagaatgtcacaattttgtccagattctcgccattgccaatgcctctcaccttctc
atttgtggcaccttcgcttttgatccgaagtgcggggttattgatgtgtccagtttccag
caggttgaaagacctgagagtggccgggggaaatgtccttttgagccagctcagcggtca
gcagctgtaatggctgggggcatcctctacgctgccactgtgaaaaactacctggggacg
gagccgattatctcccgggctgtgggtcgtgctgaggactggattcggacagagatcttg
ccatcctggcttaacgccccagcctttgttgcagcagtggccttgagcccagccgagtgg
ggggatgaagccggagacgatgaaatctacttcttctttacggagatttcccgagctttt
gattcatacgaacacgttaaggtccccagggtggcccgtgtgtgtgcgggggaccttggg
ggccggaagaccctccagcagaggtggacgacctttctgaaggctgaccttctgtgtcca
gggcctgagcatggccgggcctccagtgtcctgcaggacatggtcattcttcgacctgag
catggagcggggacgcccatcttttatggcatcttttcctcccagtgggaaggggctgcc
atctctgctgtctgttccttccgaccacaagacattcggacagtgctgaatggtcccttc
agagagcttaaacatgactgcaacaggggactgcctgtcatggacaatgatgtaccccag
cccagacctggagagtgcatcaccaacaacatgaagctccaacagtttggctcgtcactc
ttccttcctgaccgtgtgctcaccttcatccgggaccacccactcatggacaagccagtg
tttccagctgatggccatcccctgctggtcactacagatacaacctacctcagagtcgtg
gcccacagggtgcccagcctctcagggaaagagtatgatgtgctctatctggggacagag
gatggacacctccaccgagcagtgcaaattggagcccagctcagtgttcttgaggatctg
gccttattcccagagccacagccagttgagaatatgaaattgtatcaaagctggctcctg
gttggctcccgtactgaggtgacacaagtgaacacaaccaactgtggccgtctacagagc
tgctcagagtgcattctggcccgagaccctgtctgtgcctggagcgttcggctagctgcg
tgtgtggcccacactggagagcatgaagggctggttcaagacatagagtcagcggatgtc
tcttctttgtgtcctcaggagcctggagaacacccagtggtgtttgaagttcctgtggct
acagctgcacatgtggtcttaccatgttccccgagctcagcctgggcatcctgtgtgtgg
caccagcccagcggagtgactgcactcaccccccggcgggatgggctagaagtggtgata
tccccaggggccatgggtgcttatgcctgtgaatgtcaggaaggcggggcagctcgtgtg
gtagctgcttacagcttggtctggggcagccagcggggtgctccaagccgggctcaccta
gtgggggctggactggcaggcttcttcctgggagtttttgcagcatccctgactctcctt
ctgattggtcggcgtcagcagcgacaacgacagagggaacttctggctagagacaaggtg
ggcttggacctgggagtcctaccatctgggaccacaagctacagccaggaccctccctct
ccctctcctgaagatgagcggctgcccctggccctggccaagaggggcagtggctttggt
ggcttccctccaccctttctgcttgatccttgcccgagcccaccccacattcggttaact
ggggctcctctagccacgtgtgatgaaacatccatctag
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