Gadus morhua (Atlantic cod): 115533223
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Entry
115533223 CDS
T10832
Name
(RefSeq) signal transducer and activator of transcription 1-alpha/beta-like isoform X1
KO
K11220
signal transducer and activator of transcription 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04217
Necroptosis
gmh04620
Toll-like receptor signaling pathway
gmh04621
NOD-like receptor signaling pathway
gmh04625
C-type lectin receptor signaling pathway
gmh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115533223
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115533223
04621 NOD-like receptor signaling pathway
115533223
04625 C-type lectin receptor signaling pathway
115533223
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115533223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115533223
Transcription factors [BR:
gmh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
115533223
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STAT_int
STAT_bind
STAT_alpha
STAT_linker
SH2
SMC_Nse1
Motif
Other DBs
NCBI-GeneID:
115533223
NCBI-ProteinID:
XP_030199453
Ensembl:
ENSGMOG00000028277
LinkDB
All DBs
Position
20:8014163..8028211
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AA seq
760 aa
AA seq
DB search
MAQWQELKNIDSEHQNQVIQVYVHQQFPLEFRSIASAWIEAQDWKSVAEDEGRSRARYDE
LLDMVEEHYSRLVQQNNILGGPNYLQLVNDARARFQENPVHMARILSRCLSEERKIITST
RANLQECQIELDDSIIELQKKIQMADLKIKSIDEQFGKHDSFLKEWQDEVEQLNGSPVSL
QLHMRKIDIDRMLEALNQARLHVCNLIGNTLKLAEQVVSRVVDEELRSWKLRQQQACIGA
PIDTSLHKLQNWFMAAALALDKQLQQLRKLPELDLQFPPSDLLSLRTQCEKTAHCLFIKL
LKNALVVEKQPNSAQRPLILKTNVRFSVKTRFLVNHSSFNWMPKVTLIFDKDFDEIGAVN
GFRKFNFNPKGVSKMMDANEKTGLVAQFERLVLVEEKYKSKRQTESLLAVTEELHSITCV
MELKLPGLRMEVETSTLPLVVISSTAQGHGAWASILWSAMAADLQPKNLLFLTPPTVTWP
QLSEVLSWQFQAMSERGLDEQQLAMLKDKFVDETDGLVSWNKFYKCDATWVWIEGILSLI
KNHLLSIWRDGHIMGFISRDSAIVLLKDKPHGTFLLRFSETKEGAITFSWVDHSTGTARV
HAVEPYKKELSISNLADILRHYRLTDPSSRSVNPLLYLYPDTPRDEAFGTYYTKPAENTD
GYVLRNSGHWSVHPTPPPSPEENRSMESSLNNMESSLNNMDSGMNNMDTSLSNMDPSINT
MDPNININSIIRNKDFDTTMELFPELSDMGGPLHGFQLNY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtggcaggagctgaagaacattgactcggagcatcagaaccaggtcatccag
gtgtatgtccaccaacaattccccttggaattccgaagcattgcgagcgcctggatcgag
gcccaagattggaaatcggtggcagaggatgagggacgttccagggctcgttatgatgag
ttgctggacatggttgaggaacactacagccgtcttgtgcaacagaacaacattttaggc
ggacccaactatttacaactagtaaacgatgcgagggcccgcttccaggagaacccagtg
cacatggcaaggatcctctctcgatgtctgtcagaggagcggaagatcattacatcaact
agggcgaatctccaggaatgccagatagagctggacgactccatcattgaactgcagaag
aaaattcagatggctgatttgaaaatcaagtcaatcgacgagcagttcggaaagcatgac
tccttcttgaaagagtggcaagacgaagtggagcagctgaacggatcaccagtctccctg
caactacacatgaggaagattgacatagaccgaatgctcgaagctctgaatcaagccaga
ctgcacgtgtgtaacctgatcgggaacacgctgaagctggcagagcaggtggtgtccagg
gtggtggatgaggagctgaggagctggaagctcagacagcagcaggcctgcatcggagct
ccaatcgacaccagtctgcacaagctgcagaactggttcatggcggccgcattagctctg
gacaagcagctccaacagctgaggaagctgccggaactggacctacagtttccacccagt
gacctcctgtctctgaggacccagtgtgagaagaccgcacattgcctgttcataaagctc
ctgaaaaatgctctggtggtggagaaacagcccaactctgctcagagacctctgatcctc
aagactaacgtgcgcttctcagtcaaaacaaggttcctggtgaatcactcctcatttaat
tggatgcctaaagttactctgattttcgacaaggattttgatgaaattggagcggtcaac
ggtttccggaagttcaacttcaacccgaagggagtgagtaagatgatggatgctaatgag
aagacgggcttggtggcacagtttgagcgcctggtacttgtggaagaaaaatataaaagc
aagcgacaaactgaaagtctcctggccgtgaccgaggagctgcactctatcacgtgtgtg
atggaactcaagctgccaggcctgaggatggaggtagagaccagcacgctgcccctggtg
gtcatctccagtaccgcccagggccacggggcctgggcgtccatcctgtggagcgctatg
gcggcggacctccagccaaagaatctgttgttcctgaccccgcccactgtaacctggcca
caactttcagaggtgctaagctggcagttccaggctatgagtgaacggggccttgatgag
cagcagctagccatgctgaaggacaagtttgtggatgagaccgatggccttgtcagctgg
aacaagttctacaagtgtgacgccacctgggtttggatcgagggcattctgagcctgatt
aaaaatcacttgttgtcgatttggcgtgacgggcacatcatgggcttcatcagtagggac
tcagccatcgtgctgctgaaggacaagccccatggaaccttcctgctgcgcttcagtgag
accaaggagggagccatcaccttcagctgggtggaccactccacgggcacggcccgcgtt
cacgccgtggagccctacaaaaaggagctttcgatcagcaacctggccgacatcctccga
cactaccgtctcacagaccccagcagcaggagtgtgaaccctctgctctacctgtaccca
gacaccccaagggacgaggccttcgggacgtactacaccaaaccagcagaaaacactgac
ggctatgtgctgaggaattccggacattggtcagtgcaccctactccccctccttcacct
gaggagaaccgcagcatggagtccagcctgaacaacatggagtccagcctgaacaacatg
gactccggcatgaacaacatggacacaagcctcagcaacatggaccccagcatcaacacg
atggaccccaacatcaacatcaacagcatcatcagaaacaaggacttcgacactacgatg
gagctgttccctgagttgtctgacatgggtggaccactgcatggattccagcttaactat
tga
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