KEGG   Gadus morhua (Atlantic cod): 115535357
Entry
115535357         CDS       T10832                                 
Symbol
sf3a3
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115535357 (sf3a3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmh03041]
    115535357 (sf3a3)
Spliceosome [BR:gmh03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115535357 (sf3a3)
 Complex B
    115535357 (sf3a3)
 Complex C
   U2 SnRNP specific factors
    115535357 (sf3a3)
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 115535357
NCBI-ProteinID: XP_030202283
Ensembl: ENSGMOG00000015540
LinkDB
Position
22:complement(10552054..10557013)
AA seq 501 aa
METILEQQRRYHEEKERLMDAKTKEMMHKKTTLREQINSDHRTRAMLDRFMEVSGNLRDS
YEDKDGMRKDELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSMEFDELVKARDNP
TEESQNMVEFTDEEGYGRYLDLHDCFLKFTNLKGADRIEYITYLSSFDQLFDISKDRKNA
EYKKYLEMLLEYLQDYTERVKPLLDQNELYGKVLGEFDKKWENGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSL
FAKNPKAKGPKKDTERNKEIGFLEAQIYDYVEILGEQRHLTHENVQRKQARTGEEREEED
DEQLSESESEDEDNEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPK
AFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWSKLKSQKASERWQPDTEEEYE
DSSGNVVNKKTYEDLKRQGLL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggagaccattttagagcaacaacgtcgctaccatgaggaaaaggaaagacttatggat
gctaaaacaaaagagatgatgcataaaaaaactacgctacgcgaacagatcaactctgac
cacagaacaagggcgatgttggatagatttatggaagtaagtggaaatctgcgagactcc
tatgaagacaaagatggaatgaggaaagatgaactcaatgcaatctcgggaccaaatgag
tttgcggaattctacaatcggctgaaacagataaaggagtttcataggaagcacccaaat
gagatttgtgtgccaatgtctatggagtttgatgagctggtaaaggctagagacaacccc
accgaggagtctcaaaacatggtggagttcaccgatgaggaaggctacggacgctacctg
gatctccacgactgcttcctgaagttcaccaacctgaagggagccgacagaattgagtac
atcacttacctttcttccttcgaccagctgtttgacatctctaaagacagaaagaatgcc
gagtacaaaaaatacctggagatgctcttggagtacctgcaggactacacggagcgggtg
aagcccctactggaccaaaacgagctgtacggcaaagtgctgggggagtttgacaaaaag
tgggagaacggcacctttccaggctggcctaaagagacgagcagtgctttgacccacgct
ggagctcacttggacctctctgctttctcttcttgggaggagttggcctccttgggtctg
gacagattgaagtctgccctgatggctttggggctcaagtgtggagggactttagaggag
agggctcagaggcttttcagcaccaagggcaagtcactggaatcactggatccatccctc
tttgccaagaatcccaaagccaagggaccaaagaaggacacagagcgcaacaaggagatt
ggtttcctggaagcccagatatacgattatgtggagattcttggggagcagaggcacctg
acccacgagaacgtgcagcggaagcaggcccgcacgggtgaggagcgggaggaggaggac
gacgagcagctgagcgagagcgaaagcgaggacgaggacaacgagatcatctacaacccc
aagaacctgcccctcggctgggacggaaagcccattccgtattggctctataaactccac
ggtctgaacatcaactacaactgtgagatctgcggaaactacacctatagggggcccaag
gcctttcagaggcactttgcggagtggcgccacgcccacggcatgcgctgcctggggatt
cccaacaccgcccacttcgccaacgtcacccagatcgaggacgccgtttctctgtggtcg
aagctgaagtctcagaaggcctccgagagatggcagcccgatacagaggaggaatatgaa
gactcaagtggaaacgtggtcaacaagaagacctacgaggatctgaagagacaaggcttg
ctgtaa

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