Gadus morhua (Atlantic cod): 115536035 Help Entry 115536035         CDS       T10832                                  Name (RefSeq) collagen alpha-1(IX) chain-like   KO K08131   collagen type IX alpha Organism gmh  Gadus morhua (Atlantic cod) Pathway gmh04510   Focal adhesion gmh04512   ECM-receptor interaction gmh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gmh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115536035  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115536035   09142 Cell motility    04820 Cytoskeleton in muscle cells     115536035  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:gmh00535]     115536035 Proteoglycans [BR:gmh00535]  Extracellular matrix (ECM) proteoglycans   Others    115536035 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  115536035 NCBI-ProteinID:  XP_030203550 Ensembl:  ENSGMOG00000012698 LinkDB All DBs Position 22:complement(20074193..20096056) Genome browser AA seq 828 aa AA seqDB search MVTFRMIKSSVNKVWNVWQIVDEDGHKQAGLRLNGEQQALEYFLMGADGNLQTVTFPGLS VLFNTKWHKVMIGVEREQVTLYVDCMPVDRRPIKGKGPINTEGDTLIGRLETDAEASVVF ELQWMLIHCDPKRAQRESCSELPATEMFANAEPDKGFQGPPGAPGPEGPRGPQGENGRDG RDGLPGTTGNPGATGPKGEQGEIGLPGQRGLGGLPGPAASPGPMGPRGPVGERGLPGFPG IAGPPGPATEGPAGTPGKPGIPGDEGNIGPEGTPGTRGSNGNPGVPGLPGPPGPMGPPGV GSPEGSGEPCPAACPAGPQGLAGLPGMKGHKGSDGNPGTPGTDGAQGADGLPGAAGPQGH MGDDGQRGPIGLSGTAGEKGDRGPPGFNGNVGPTGPPGNPGVEGVRGRQGLEGPKGDEGA VGSPGEQGIQGDKGGTGEAGKDGMDGIPGVDGSKGEAGVAGIVGVRGIVGIPGLPGKQGG VGPTGEKGDLGAEGAVGPVGLSGKAGEQGEPGEDGEPGAKGATGESGKQGPLGAEGPQGV QGDKGDKGDTGAMGIKGHTGLKGDQGPMGPSGQKGSEGDNGASGDPGIKGDQGPPGISGV RGELGAKGNRGATGADGRPGQPGHEGQHGPIGPRGLEGESGIPGAPGPRGLPGPKVNDDK LRDLCSVIVEEQLLEFRKEMMKRPAALGSPGTPGLVGPPGPSGPPGANGEQGLMGLKGPP GYFGLPGIPGKKGEAGTQGGKGDAGENGVGVKGSSGEPGTQGPAGTPGVGLDGKNGARGE TGASGTPGSPGPRGATGPTGLCDPSTCIGRSPPLYMLAGRKSSSYKNQ NT seq 2487 nt NT seq  +upstreamnt  +downstreamnt atggtgaccttccgcatgatcaagagcagtgtcaacaaggtgtggaacgtgtggcagatc gtggacgaggacggccacaagcaggcgggcctcaggctgaacggcgagcagcaggccctg gagtacttcctgatgggcgccgacgggaacctgcagacggtcaccttcccgggcctatcg gtgctcttcaacaccaagtggcacaaggtgatgatcggcgtggagcgggagcaggtcacg ctgtacgtggactgcatgcccgtggaccgcaggcccatcaaggggaagggccccatcaac accgagggggacaccctgatcggccgcctggagacggacgccgaggcctctgtggtgttt gagctccagtggatgttgattcactgtgacccaaagagggctcagagggagagctgcagc gagctgcccgccactgagatgtttgccaatgctgagccggacaagggattccaaggaccc ccgggcgcgccgggccccgagggcccgcgggggccccaaggggagaacggcagagacggg agggatggtctccccgggacaactggcaatcccggagcaactggccccaagggggagcag ggggagatcggcctgccgggacagaggggcctgggcggcctcccgggacctgctgcgtcc cctggcccaatgggtccaagagggcctgtcggagaaagaggacttcctggttttcctggc atagcaggaccccctgggccggccacagaaggaccagctggaacccccgggaaacctgga attccgggagacgaggggaacatcggaccggagggcaccccaggtaccagggggagtaat ggcaacccgggggttcccggccttccaggaccaccggggcctatggggcctcctggtgtc ggcagccccgaggggagtggggaaccttgtccagctgcttgccccgcaggaccacaagga ctggcaggtcttccaggcatgaagggacacaaaggtagcgatgggaaccctgggacaccc ggcacagacggagcacaaggagcagacggacttcccggggctgcaggtcctcaaggacac atgggcgacgacggacaaagagggcctattggattgtcgggaacagcgggcgaaaaagga gatagaggtcctcctggttttaatggcaacgtgggtccgaccgggccacccggaaatccc ggtgtggaaggtgtacgaggacgtcagggtttggagggtcctaagggggatgagggagcg gtcgggtcaccaggcgagcagggtatccaaggagacaaaggaggaaccggggaagccggc aaagatggcatggatggtatccccggtgtggacgggagcaagggagaggctggcgttgca ggaatcgttggtgtcaggggcattgtgggaatcccgggccttccagggaaacagggaggg gttggacccaccggtgagaagggagatctgggtgctgagggagctgtggggccagtcgga ctatctggaaaggcgggcgagcaaggagagccaggagaggatggagaaccaggagccaag ggggccacaggggaatccgggaagcagggaccgctgggggcagaaggcccacagggcgtc cagggggacaaaggggacaagggggacactggtgcaatggggataaagggccacactgga ctcaaaggagatcaggggccaatgggtccatccggccagaaaggaagtgagggagataat ggtgcttctggagatcccggaattaagggcgaccaggggcctcctggtatttctggcgtc agaggagagctcggggcaaagggcaaccgaggagcgacaggggccgacggcaggccgggt cagccaggacacgagggccagcacgggcccatcgggccccgaggcttggagggagagagc ggcatccccggggccccaggacccaggggcctacctggtcctaaagtgaacgacgacaag ctaagagacctttgctcagtcattgttgaagaacaactactagaattcaggaaagagatg atgaagagaccagcagcactgggctcacctggtacccctggactggttggcccccctggc cccagcgggcccccaggagcaaatggagagcaaggtctcatgggcctcaaagggcctccg ggctactttggacttcctggtattcctggaaagaaaggtgaagccgggacccagggtggg aagggagacgcgggagagaacggcgttggagtcaagggaagctctggagagccgggcaca caaggtccagcagggactcccggtgtcgggctggatggcaagaacggcgcccgcggggag acaggggcctccggcaccccaggctcaccggggccccggggggccacgggccccacagga ctttgcgacccctccacctgcataggcagatcgcccccactctacatgctcgctggaagg aagtcatccagctacaaaaaccaatga

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