KEGG   Gadus morhua (Atlantic cod): 115536171
Entry
115536171         CDS       T10832                                 
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04510  Focal adhesion
gmh04512  ECM-receptor interaction
gmh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115536171 (col9a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115536171 (col9a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115536171 (col9a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:gmh00535]
    115536171 (col9a2)
Proteoglycans [BR:gmh00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   115536171 (col9a2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 115536171
NCBI-ProteinID: XP_030203746
Ensembl: ENSGMOG00000013372
LinkDB
Position
22:14380478..14402133
AA seq 691 aa
MATLSALLTGWVILQTLCLALAQVRGPPGPQGQPGSPGPSGTPGSDGMDGETGAPGLPGA
IGQKGEPGEPGPDGLSGENGIDGLIGAKGDRGPIGSPGPKGQPGPSGEPGPPGPGLPGLA
GAAGSIGLPGEMGLSGSKGILGSPGAPGLPGPPGKPGPPGKFLGAEEGSAGFQCPTNCPA
GPKGPQGLMGVKGHKGRSGILGDSGSIGKLGTKGETGISGEQGIPGPAGPMGLRGYPGMM
GPKGEAGPRGYKGITGPVGIPGPPGEEGPQGPPGESGDKGVVGGRGIQGPHGAVGKKGEN
GLPGIDGKDGTPGIPGIKGGPGQAGRPGPSGNQGTAGLPGSPGTKGGPGDTGEAGPRGHV
GMAGAPGPLGEPGLPGVIGMEGVPGPKGDRGERGPVGAQGIVGKAGNKGERGPIGVPGAQ
GLSGTKGDKGFQGKVGAKGDFGDPGVEGLAGEKGEKGLSGEPGPKGQQGVRGEMGFNGPT
GDSGKPGDQGPLGLPGPRGLGGERGVPGMPGIVGASGRDASDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGPTGSQGPHGHTGARGIPGIIGGPGQIGNTGLKGKR
GAKGERGDPGRPHPGAPGPPGIPGAAGIDGVARDGRPGERGPQGAAGVAGLPGRAGPTGL
LGYCEAAMCLAASAYTSPRLQDASRIKGPGN
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggccacgctctctgccttgttgacgggctgggtaatcctgcagaccctgtgcctggct
ctggcccaagtgagaggtccacctggacctcagggccaacccggctccccaggcccctct
ggcacccctggatctgacggcatggatggggagacaggagctcccgggctccctggtgca
attggacagaagggagagcctggtgagcccggccctgatggactatcaggagagaatggc
attgatggtttgattggtgctaagggcgaccgtggcccaatcggaagccccggacccaag
ggtcaacccggacctagcggcgagcccggtcctcctggccccgggctgcccggactggct
ggtgctgccgggtccataggccttcctggtgagatgggccttagtggatccaagggaatc
ctgggctcccctggagcccccggtctccccggaccccctgggaagccaggccccccaggg
aagttccttggtgcagaggagggcagtgcaggcttccagtgtccaactaattgtccagcc
ggccctaagggcccacagggcctcatgggagtcaagggacacaaagggcgctcagggatc
ctgggagactccggcagcatcgggaaactgggcaccaaaggagagacgggcatctctgga
gagcagggcattccaggaccagcgggtccaatgggcctgagaggctacccaggaatgatg
ggccccaaaggggaagcgggccctcgtggctacaagggcatcacagggcccgtaggcatc
ccaggacccccgggcgaggagggacctcagggaccgcctggagagtccggagataaggga
gtcgtgggcggtcgaggaattcaaggcccacatggagcagtcgggaaaaagggagaaaat
ggcctgcccgggatcgatgggaaggacggaacaccaggaattcctggcattaagggaggt
ccgggccaggctggcaggccaggcccgtccggaaaccagggaacagcgggattgcccgga
agcccaggcacaaaggggggacctggagacacgggggaggcaggacccaggggacatgtc
ggcatggcaggcgcccccggacctctgggcgagcccggtctcccgggcgtcattggcatg
gagggagtcccgggacccaagggagacagaggagagcggggaccggtaggcgcgcaggga
atcgtcggcaaggcaggaaacaagggagagagggggcccatcggagtccccggggcccaa
ggcctctccgggaccaaaggagacaagggtttccaagggaaagttggagcaaagggggac
tttggtgaccccggtgtggagggcctcgccggggagaaaggagaaaagggtttgtctggg
gaacccggacctaaaggccagcaaggagtgaggggtgagatgggtttcaacggacccaca
ggggactccggtaagccaggggaccaggggccactcggcctccccggccccaggggactg
ggtggcgagagaggagtgccaggcatgcccggcattgtgggagccagcggacgggatgcg
tctgaccagcacatcatcgaagtggtgctgaagatgttgcaggagaggctggctgccgtg
gcggtgagcgccaagagggccgtgctcggtggagcgggtgtgatgggaccccccggcccg
cccggacccccggggccgaccggctctcaggggccccacggccacacaggggcccgaggc
atccccggcatcatcggcggcccgggacagatcggcaacacaggactcaaaggaaagaga
ggagcgaagggagagagaggagacccaggcagacctcaccctggtgcgccaggacctcca
ggaatacccggagcggccggcatcgacggcgtggcccgggatggcaggccgggcgagagg
ggcccccagggcgcggcgggcgtagcagggctccccggcagggcgggccccacaggtctg
ctcgggtactgcgaggccgccatgtgcctggctgcctcggcctacacctcccccagacta
caggacgccagcaggatcaagggccccggtaactaa

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