Gadus morhua (Atlantic cod): 115539935
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Entry
115539935 CDS
T10832
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04141
Protein processing in endoplasmic reticulum
gmh04210
Apoptosis
gmh04217
Necroptosis
gmh04218
Cellular senescence
gmh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115539935
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115539935
04217 Necroptosis
115539935
04218 Cellular senescence
115539935
09144 Cellular community - eukaryotes
04510 Focal adhesion
115539935
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115539935
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
115539935
Peptidases and inhibitors [BR:
gmh01002
]
Cysteine peptidases
Family C2: calpain family
115539935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
115539935
NCBI-ProteinID:
XP_030206694
Ensembl:
ENSGMOG00000000251
LinkDB
All DBs
Position
3:22017818..22034242
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AA seq
697 aa
AA seq
DB search
MAGVASTLAKKRALAAGFGTNANAVKYLNQDFHSLRAQSQSQGALFCDHTFAAAPESLGF
KDLGRNSPKTRGVTWKRPTELVSSPEFIIGGATRTDICQGGLGDCWLLAAIASLTLNEDV
MARVVPSDQDFGDQYAGIFHFQFWQYGEWVDVVIDDRLPVKDGELLFVHSAEGREFWSAL
LEKAYAKVCGCYEALSGGSTTEGFEDFTGGIAENFDLKNAPPNMFQIVKKALEAGSLLGC
SIDITSASDSEAVTRQKLVKGHAYSLTGAVEVGYRGRQEKLIRVRNPWGQVEWTGAWSDG
SSEWNSVEGECPNANAEDGEFWMSFTEFMRHYSRIEICTLTPDTILDDSIKHWSVGKFDG
TWRKGSTAGGCRNNPYTFWTNPQFVIKLNEEDDDPEDGEEGCSVVLGLIQKNRRKMRKSG
EDMHTIGFAIYELPEQFHGQTQVHLDKNFFLSHAQKARSETFINLREVSTRFKLPPGEYL
VVPSTYEAHLNGDFCIRVFSEKQSQTIPCDDPVEAELEDEEVADEDVDAGFRGLFTKLAG
DDMEISYVELRTILNKIVSKRTDIKTDGFCCETCRVMVNLLDESGNGKLGLGEFATLWKK
VQKYLTIYKQNDGDNSGTMSTPEMRVALKSAGFTLNNAIYQMLVCRYAEPDMTMDFDNFV
ACLMRLEMMFRIFKKLDTEDSGTVQVTLDQWLNIAMV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgtggcttctactctggccaagaaaagggccctggctgcgggcttcggcacc
aacgccaacgcggtgaagtacctgaaccaggacttccattcgctacgggcgcagagtcag
agccaaggggcgctgttctgcgaccacaccttcgctgccgctcccgagtctcttggcttc
aaagacctcggtcggaactcccctaagacccgcggtgtgacctggaagagacccacggag
ctggtgtccagcccagagtttatcatcggaggagcaaccaggacggacatctgccaggga
gggctaggtgactgctggctgctggctgccatcgcctccctgacgctcaatgaggatgtg
atggcccgcgtggtgccgtccgaccaggactttggagaccagtacgctggaatattccac
ttccagttctggcagtacggcgagtgggtggacgttgtcattgatgaccgcctgccagtc
aaagatggagagttgctattcgtccattctgctgaggggcgggagttctggagcgctctg
ttggagaaggcctacgccaaggtttgtggctgctacgaggccctctctggtggttccacc
acggaaggctttgaggacttcaccggaggcatcgccgagaactttgatctcaagaatgcc
ccccccaacatgttccagatcgtcaagaaggccctggaggcaggatcactgcttggctgc
tccatcgacatcaccagtgcttctgactctgaggctgtgacgcgccagaagctggtcaaa
ggtcacgcctactccctgaccggcgctgtagaggtgggctaccgcggtcggcaggagaag
ctgatccgggtgaggaacccctggggtcaggtggagtggaccggggcctggagcgacggg
tcatcagagtggaactctgtcgagggagaatgtcccaacgccaatgcagaggacggagaa
ttctggatgtccttcactgagttcatgagacactactctcgtatcgagatctgcaccctg
accccagacaccatcctggacgactctatcaaacactggagtgtcgggaagttcgacgga
acctggaggaaagggtccacagcaggcggctgccgcaacaacccctacaccttctggaca
aacccccagtttgtgatcaagctgaatgaggaggatgacgaccctgaggacggagaggag
ggctgcagtgtggtgctggggctgatccagaagaaccgtaggaagatgaggaagtctgga
gaagacatgcacaccataggcttcgccatatacgagctccccgaacagttccacgggcag
acgcaggtgcaccttgataagaacttcttcctgagccacgcccagaaggcccgctccgag
accttcattaacctgcgtgaggtcagcacgcgcttcaagctgccccctggggagtacctg
gtggtgccttccacctacgaagcccacctcaacggagacttctgcatccgcgtcttctct
gagaaacagtcccagacaataccgtgtgatgatcctgtcgaagctgagcttgaagatgag
gaggttgctgacgaggatgtggatgctggtttcagaggtctgttcaccaagctcgctgga
gatgatatggaaatctcttatgtggagttgagaaccattttgaataagatcgtttccaaa
cgaaccgacataaaaactgatggcttctgctgcgaaacctgcagggtcatggtcaaccta
ttggacgagagtggaaacggaaagctgggtcttggagagtttgcaactctgtggaaaaaa
gttcagaaatatctgacgatctacaagcagaatgacggtgataactcagggacgatgagc
acaccagagatgcgtgtcgctctaaaatctgcaggtttcaccctgaacaacgccatctac
cagatgctggtgtgccgctacgctgagccggacatgacgatggactttgataactttgtg
gcctgtttgatgcgcctggagatgatgtttaggatcttcaagaagctggatacagaagac
agcggtactgtgcaggtcacccttgaccagtggttgaacattgccatggtctaa
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