Gadus morhua (Atlantic cod): 115542578
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Entry
115542578 CDS
T10832
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115542578
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115542578
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
SieB
YxzE
ATP-synt_B
GRP
Motif
Other DBs
NCBI-GeneID:
115542578
NCBI-ProteinID:
XP_030210732
Ensembl:
ENSGMOG00000001923
LinkDB
All DBs
Position
4:complement(31954674..32003619)
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AA seq
2075 aa
AA seq
DB search
MAQLLVPTGPDSFRPFVPESLAAIERHIAEELARRPRAERRGADGAGGDEDDEPRPNGDL
EAGKSLPFIYGDVPPRLVSTPLEDLDSFYCNQKTFIVLNRGKALFRFNATPALYILSPFN
PLRRISIRVLVHSMFSVLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILA
RGFCVGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRFPLWYNSSVNDTLDSL
SDSLLLNHSLALSDSLALNGTFNWTEYMNNDSNYYSLPNRRDPLLCGNGTGAGLCPEGYI
CLKVGRNPDYGYTSFDSFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLG
SFYLVNLILAVVAMAYDEQNQATIEENQQKEEEFQAMLEQLKRQQEEAQVAAAAAAAGPE
EESGEYSERGEGGGGGGGGGGGRGGAAVTSESSSLASKLSSKSAKERRNRRKKRRQREEE
EERGRRGTVRKSESEDSIKRSSFRFSIDANRLTYEKRCSSPNQSLLSIRGSLFSPRRNSR
ASLFSFRGRARDAGSENDFADDEHSTLEEGPCGDDSRRGSLFVPRRAERRYSTASQGSVC
SGTVPRDRRLPANGKMHCAVDCNGVVSLVAGAAGGLPLPPPTPPTGRLLLPHEGTMTMDT
ELKKRCSSFRKASMDFLEEPGARQRALSIASILTNTMEELEESRQKCPPCWYKFANSYLI
WDCHPTWLRFKEVMNMVVMDPFVDLAITICIVLNTLFMAMEHYPMTIEFNNVLSVGNLVF
TVIFTAEMCFKIIALDPYYYFQQGWNIFDSIIVSLSLMELGLANVEGLSVLRSFRLLRVF
KLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIHADC
KLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVDGQSVCLIVFMMVMVIGNLVVLNLF
LALLLSSFSADNLAATDEDSEMNNLQIAVGRIQRGIAFFKAAMRKFLRRICFDGVAGRGK
DQAMPLESKTVEELQSNGKGNCISSNHTAVEVITKEPSPAGEYLKEGNGRPGWGGVLGVR
VSDGGDNSPMEKYPVEDCDYMSFIHNPVLTVTVPIAVVESDFENPNTEEFSSDSSDVEGS
TEKIDIEPRPPSSSEGSTVDIRPPGEGCESEEMEPEESMDPAACFTDGCVRRFQCCQVSV
EEGWWKSWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTVKTMLEYAD
KVFTYVFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSIVSLVANALGYSELSAIKSLR
TLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYC
VNTTNDEVFPIDVVNNRSECLALVNDSARWKNVKINFDNVGAGYLALLQVATFKGWMDIM
YAAVDSRNLEDQPEYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGFVFDCITKQAFDIVIMILICLNMVTM
MVETDDQGVDMDWVLYWINLVFIVLFTGECVLKMVSLRHYYFTIGWNVFDFVVVILSIVG
MFLSKVFEKYLVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLF
LVMFIYAIFGMSNFAYVKHESGIDDMFNFETFGNSMICLFQITTSGGWDTLLAPILNKRE
PDCDSQLEHPGNPNKGNCGNPSVGILFFVSYVIICFLIVVNMYIAVILENFSVATEESAE
PLSEDDFEMFYEVWERFDPDATQFIEYARLSEFADALDPPLRMPKPNKIQLIGMDLPMVS
GERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASNPSKVSYEPITSTLRRKQEDTS
ARMIQRAFRCHRVRLAMKRASKLYKEQLAVGVRDPDKDVVVFGLPEESSERSNKTDLTLS
TASPPSYNSVTKSAKYEQGDSEKENMGMDSRGRRQ
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgcttgtaccgacgggacccgacagcttccgccccttcgtacccgagtcg
ctggccgccatcgagaggcacatcgccgaggagctggcccgccggccgcgggcggagcgc
cgcggggccgacggcgccggaggagacgaggacgacgagccgcggcccaacggcgacctg
gaggcggggaagtccctgcccttcatctacggggacgtgcccccgcgcctggtgtccacg
ccgctggaggacctggactccttctactgcaaccagaagacctttatagtattgaaccgt
gggaaggccctcttccgcttcaacgccacgcctgcattgtacatcctcagccccttcaac
cctctgcggcggatctccatcagagtcctggtccactcgatgttcagcgtgttgatcatg
ttcaccatcctgaccaactgtgcgtttatgaccctcagcaacccccccgactgggccaag
aatgtggaatacactttcacagggatctacacctttgagtcactcatcaagatcctggcc
aggggcttctgtgtgggcaagttcacgttcttgcgcgacccctggaactggctggacttc
agtgttatcctcatggcatatgtcacagagtttgtggacctgggcaatgtctcagcactg
cgaaccttcagggttctgagggccctgaaaactatttctgtcatcccaggcctgaagacc
atcgtgggggctctgatccagtcggtcaagaagctgtcggacgtcatgatcctgactgtc
ttctgcctcagtgtgttcgccctcatcggcctgcagctcttcatgggcaacctgcgccag
aagtgcgtgcgtttcccgctctggtacaactcctctgtcaacgacaccctcgacagcctg
agcgatagcctgctgctgaaccacagcctagcgctcagcgatagcctagcattgaacggg
accttcaactggaccgagtacatgaacaacgacagtaattactacagcctccccaaccgt
cgggacccgctgctctgcggaaacggcactggcgccgggttgtgtcccgagggctacatc
tgcctgaaggtgggccgtaacccagactacggctacaccagcttcgactccttcagctgg
gccttcctctcattgttccgcctgatgacccaggactactgggagaacctgtaccaacag
acgctgcgggcggccggtaagccctacatgatcttcttcgtcctggtcatcttcctgggc
tccttctacctggtcaacctgatcctggccgtggtggccatggcctacgacgagcagaac
caggccaccatcgaggagaaccagcagaaggaggaggagttccaggccatgctggagcag
ctgaagagacagcaggaggaggcgcaggttgccgcggcagcagcagcggcagggcctgag
gaggagagcggggagtacagcgagcgaggtgaagggggaggaggaggaggaggaggagga
ggagggagaggaggagccgccgtcacctcagagtcctcgtccctggcgtccaagctcagc
tccaagagcgccaaggagcggcggaaccggcgcaagaagcgccggcagcgggaggaggag
gaggagcggggccggcggggcacggtccgcaagtccgagtccgaggacagcatcaagagg
tcaagcttccgcttctccatcgacgccaaccgcctcacgtacgagaagaggtgctcctcg
cccaatcagtccctgctcagcatccggggctcgctcttctcgccgcgccgcaacagccgc
gccagcctcttcagcttccgggggcgggcccgcgacgccggctcggagaacgacttcgcc
gacgacgagcacagcacgctggaggaggggccgtgcggggacgacagccggcgcggatcg
ctcttcgtgccgcggcgggccgagcgccgctacagcacggccagccagggcagcgtgtgc
agcggcaccgtgccgcgcgacaggcgtctgcccgccaacgggaagatgcactgcgccgtc
gactgcaacggcgtggtgtcgctggtggccggcgccgcgggggggctgcctctgccaccg
cccactcccccgaccggccgtctcctgctcccccatgaggggaccatgacgatggacacg
gagctcaagaagaggtgctccagcttccgcaaggcgtccatggacttcctggaggagccc
ggcgcccggcagagagccctgagcatcgccagcatcctcaccaacaccatggaagaactg
gaagagtccagacagaagtgccccccctgctggtacaagttcgccaactcctacctgatc
tgggactgccaccccacctggctgcggttcaaggaggtgatgaacatggtggtgatggac
cccttcgtggacctggccatcacaatctgcatcgtcctcaacacgctcttcatggccatg
gagcactacccaatgaccatcgagttcaacaacgtgttgtctgtggggaacctggtgttc
acggtcatcttcacggccgagatgtgcttcaagatcattgctctggacccctactactac
ttccagcaaggctggaacatcttcgacagcatcatcgtcagcctcagtctgatggagctc
ggcctggccaacgtagaggggttgtctgtgctgaggtccttccgattgctgagggtgttc
aagctggccaagtcgtggccaaccctcaacatgctgatcaagatcatcggcaactcggtg
ggtgccttgggcaacctcaccctggtcctcgccatcatcgtcttcatcttcgcggtggtg
ggcatgcagctcttcggcaagagctacaaggagtgcgtgtgcaagatccacgccgactgc
aagctgccgcgctggcacatgcacgacttcttccactcgttcctcatcgtgttccgtgtg
ctgtgcggcgagtggatcgagaccatgtgggactgcatggaggtggacggccagagcgtg
tgcctaatcgtcttcatgatggtcatggtcatcggcaacctggtggttctgaacctcttc
ctggccctgctgctgagctccttcagcgccgataacctggccgccacggacgaggacagc
gagatgaacaacctgcagattgctgtgggccgcatccagcgcggcatcgccttcttcaag
gccgccatgcgcaagttcctgcggaggatctgcttcgacggggtcgccggcagaggcaag
gaccaggccatgcccctggagagcaagaccgtggaggagttgcagagcaacggcaagggc
aactgcatctcctccaaccacacagcggtggaagtcatcaccaaggagcccagcccggcg
ggggagtacctgaaggagggcaatgggcgcccggggtgggggggggtcctgggggtgagg
gtgagtgacggcggggacaacagcccgatggagaaataccctgtggaggactgcgactac
atgtccttcatccacaaccccgtcctgacggtcacggtgccgatcgccgtggtggagtcg
gactttgagaaccccaacacggaggagttcagcagcgactcgtcggatgtggaaggcagc
actgagaaaatagacatcgagcccagacccccgagctcctctgaggggagcacagtggac
atccgaccccccggggaggggtgcgagtcagaggagatggagcctgaggagtccatggac
ccggcggcctgcttcaccgatggctgcgtgcgcaggttccagtgttgccaggtgagtgtg
gaggaaggctggtggaagagctggtggacgctgaggaagacctgcttcatcatagtggag
cacaactggtttgagtcattcatcatcttcatgatcctgctcagcagtggagccctggcc
tttgaggacatttacattgagcagcggcggacagtgaagaccatgctggagtacgcagac
aaggtgttcacgtacgtcttcatcctggagatgctgttgaagtgggtggcgtatggtttc
gtcaagtacttcaccaacgcctggtgctggctggactttcttattgttgatgtctctatt
gttagcttggtggctaatgcactgggctattctgagctgagcgccattaaatctctgcga
acactgcgggcccttcgacccctgagggccctttcccggttcgagggcatgagggtggtg
gtgaacgctctgctgggtgccatcccgtccatcatgaacgtgctactggtgtgcctcatc
ttctggctcatcttcagcatcatgggcgtaaacctgttcgccggcaagtactactactgc
gtcaacaccaccaacgacgaggtgttccccattgacgtggtcaacaaccgcagcgagtgc
ctggcgctggtcaacgacagcgcgcgctggaagaacgtcaagatcaacttcgacaacgtg
ggcgcaggctatctggcgctgctgcaggtggcaacgtttaagggttggatggacatcatg
tatgctgccgtggactctcgcaacttggaggatcaaccggagtatgaggtgaacctctac
atgtacctctatttcgtcatcttcatcatcttcggctccttcttcaccctcaacctcttc
atcggtgtcatcatcgacaacttcaaccagcagaagaaaaagtttggaggtcaggatatc
ttcatgacggaggagcagaagaaatactacaatgccatgaagaagctgggatccaagaag
ccccagaagcccatacccagacctacgaacgcgttccaaggctttgtgttcgactgcatc
accaagcaggcctttgacatcgtcatcatgatcctcatctgcctcaacatggtcaccatg
atggtggagacggacgaccagggtgtggacatggactgggtgctctactggatcaacctg
gtgttcatcgtgctgttcacgggcgagtgcgtgctcaagatggtctccctgcgccactac
tacttcaccatcggctggaacgtcttcgactttgtggtggtcatcctgtccattgttggt
atgtttctgtcaaaagtcttcgagaagtacttggtctctccgacgctattccgcgtcatc
cgcctggcgcgaatcggccgcatcctgcgcctgatcaagggcgccaagggcatccgcaca
ctcctcttcgccctgatgatgtccctgccggctctcttcaacatcgggctcctcctcttc
ctcgtcatgttcatctacgccatctttggcatgtccaacttcgcctacgtcaagcacgag
tcgggcatcgacgacatgttcaacttcgagaccttcggcaacagcatgatctgcctgttc
cagatcaccacctcgggcgggtgggacaccctgctggcgcccatcctgaacaagcgcgag
cccgactgcgacagccaactggagcacccgggcaaccccaacaagggcaactgcggcaac
ccttcggtgggcatcctgttcttcgtcagctacgtcatcatctgcttcctgatcgtggtc
aacatgtacatcgccgtcatcctggagaactttagcgtggccacagaggagagcgccgag
ccgctgagcgaggacgactttgagatgttctacgaggtgtgggagcgcttcgaccccgac
gccacccagttcatcgagtacgcccggctgtcggagtttgccgacgccctggacccgccg
ctgcggatgcccaagcccaacaagatccagctgattggcatggacctgcccatggtgagc
ggcgaacgcatccactgcctggacatcctcttcgcgttcacaaagcgcgtgcttggcgag
ggcggcgagatggacgtgctgcgcgggcagatggaggagcgcttcatggcatccaacccg
tccaaagtgtcctatgagcccatcacctccacgctgcggcgcaagcaggaggacacgtcg
gcgcggatgatccagcgggcgttccggtgccaccgtgtccgcctggccatgaagcgggcg
tccaagctgtacaaggagcagttggcggtgggcgtgcgggacccggacaaggacgtggtg
gtctttggcttgcccgaggagagctcggagaggtcgaacaaaacggatctcacgctgtcg
acggcgtcgcctccctcctacaacagcgtgaccaagtcggcgaaatacgagcagggggac
tcggagaaggagaacatgggaatggactcacgaggcaggaggcaatag
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integrated database retrieval system
