Gadus morhua (Atlantic cod): 115554056
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Entry
115554056 CDS
T10832
Name
(RefSeq) PHD finger protein 1-like
KO
K11467
PHD finger protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115554056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115554056
03036 Chromosome and associated proteins [BR:
gmh03036
]
115554056
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115554056
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115554056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
Mtf2_C
PHD
PHD_ash2p_like
PHD_2
Chromo
ASH2L-like_WH
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
115554056
NCBI-ProteinID:
XP_030226529
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All DBs
Position
11:11118602..11138456
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AA seq
572 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAVGGEE
VCCICDAPPLKDPLLNCFKCRHSYHPECHTPAIEPEADCDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGGCGQWFH
EACTQCLSKPLLYGDRFYEFQCSVCANGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFTNENWESLLLGALSDTARQDRCHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLVSDSSPLITDPPVNITHRRSPLSLSCQRRAGVLESRKSKRRIVETQPCPDPTP
ANQLELLPRCHDYGGGACLCKEELDLSSPPKRMFALYHPTYNGNTPLSRTVHHYNSTEDT
CRVTPPCLPCALQSNNNNHQHHHHNHNMNGSYQHHNSHHANPHPNPNPHPHPHPHPHPHQ
HPHPHPPTHKLLEPCPSLLLRGLASHQVGIGGGGVGAGGGGGGGGGGGGGGGSGGGGGGG
GGGGEAVRILARRVTPDGKVQYLVEWGNVSVY
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggggggggtgagtgaaggagatgatgttttggctcgatggagtgatggactactgtac
ctcggcaacgtgaagagagtggatggtgtgaagcagtgctgtctggtgagatttgaggac
aactcagaattctgggttctgaggaaggacatccactcctttgctgttggaggggaagaa
gtctgctgtatatgtgacgccccacctctcaaagatccactcttgaactgtttcaaatgt
cgccatagctaccaccccgagtgtcacacccctgccatcgagcccgaggcggactgtgac
tcctggatctgtcggcagtgcgtcttcgcagtggcaacaaagagaggtggggcccttaag
agaggccgcttcgcccgcctcatgcagttcatgaagctgcggcttccctatcagctgtca
tctttagactgggacccgcagcatctgaccaatcagcagcagtgttactgctactgcgct
ggacctggagagtggaacctcaagatgctccagtgtggaggctgtggccagtggttccat
gaggcctgcactcagtgtctgagcaagcctcttctgtacggagacaggttctatgagttc
cagtgttctgtgtgtgcaaacggaccagaaaccatccagagacttccaatgacctgggtt
gacttggcccatcttgtgctctatcatctctccctgtgctgcaagaggaagtactttgat
ttcgaccatgaaatcatgtccttcaccaacgagaactgggagtctctgcttctcggcgcg
ctgtcagacacagccagacaggaccgctgtcacaacctgctcaacgcactcaactcccac
aaggacaggttcgtgtctgggaaggagatcaagaagaagaagtgtctctttgggctccag
gtgcgagccccgccccctctcgtatccgattcgtcaccgctcatcaccgacccgcccgtc
aacatcacacacaggagaagcccgctatcactttcctgtcagaggagagcgggggtgttg
gagtctcgtaaatccaagcgtcgcatcgtagagacacagccgtgtccagaccccacacct
gcaaaccaactggaactgttgccacgttgccatgattacgggggcggggcctgcctctgc
aaagaggagctggacctgagctcccctcctaagaggatgtttgccctctaccaccccacc
tacaacggaaacactcctctctccaggacggtgcatcactacaacagcactgaggataca
tgcagggtgacccccccctgccttccgtgcgccctccagtccaacaacaacaatcaccaa
caccatcaccacaaccacaacatgaacggcagctaccagcaccacaacagccaccatgcc
aacccccaccccaaccccaacccccacccccacccccacccccacccccaccctcaccag
cacccccacccccacccaccgacccacaagctgctggagccctgcccgtccctgctgctg
agggggctggcgtctcaccaggtgggcatcggtggtgggggggtgggggcgggtggtgga
ggaggaggcggagggggaggagggggagggggaggcagcgggggaggtgggggaggggga
ggcggcgggggggaggcggtccggatcctggcgaggcgtgtcacgccggacggaaaggtg
cagtacctggtggagtgggggaacgtcagtgtttactga
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