Gadus morhua (Atlantic cod): 115554446
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Entry
115554446 CDS
T10832
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115554446 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115554446 (trip13)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
115554446 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_24
Viral_helicase1
AAA_14
AAA_25
NPHP3_N
Cytidylate_kin
TIP49
AAA_5
ATPase_2
KAP_NTPase
NACHT
AAA_28
TsaE
RNA_helicase
AAA_7
RuvB_N
AAA_30
AAA_17
AAA_33
ATPase
ABC_tran
bpMoxR
AAA_11
IstB_IS21
SLFN-g3_helicase
DUF815
Rad17
AAA_19
NB-ARC
Mg_chelatase
PduV-EutP
nSTAND1
Sigma54_activat
PhoH
NTPase_1
nSTAND6
AAA_3
DUF6393
Motif
Other DBs
NCBI-GeneID:
115554446
NCBI-ProteinID:
XP_030227065
Ensembl:
ENSGMOG00000016804
LinkDB
All DBs
Position
11:1403384..1407913
Genome browser
AA seq
420 aa
AA seq
DB search
MEGDNMDVSHRSQSVHVEVHVKSHSTAKRSDVRTHVLALLGRHCTVFGNQKWRDFDEEFL
KKNVESVAVVDEEDMPVDLKSSDVSLHIFTLNDDGPSTLNLEENEELSAANHWLLPAAEF
NGIWESLVYEDGVKTQLLDYVSTTIFFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKAL
AQKLSIRLSNRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKDALVFVLID
EVESLTASRNASQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSNVTDKIDLAFVDR
ADIKQYIGPPSEKGIYNIYLSCLEELMKCQIIYPRRQLFTMSELQTMGFVESEVSDHSLI
LRNIALKSKGLSGRTLRKLPFLAHALFVKTPTVTLERFLEALDQAVTKQKVEKAHLANSV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgacaatatggatgtcagtcatcggagccagagtgttcatgtggaggttcat
gttaaatctcacagcacagccaagcggtcagatgtgcggacacatgtcctggctttactg
ggtcgtcattgcactgtttttggaaatcagaagtggagagattttgacgaagagttccta
aagaagaatgtggaatctgttgctgttgtagatgaggaggacatgcctgtggatctgaag
agctctgatgtttccctgcacatcttcactcttaatgatgatggccctagcacgctcaac
ctggaggagaacgaggagctctcggcagccaatcactggctactgccggcagctgaattt
aatggaatttgggagagcctggtatatgaagatggagttaaaacacagcttttggattat
gtctcgacgacaattttcttctcagacaaaaatgttgacagcaaccttatatcgtggaac
cgtgttgtgctgcttcatggtcccccaggcacagggaagacatccttatgcaaagcactt
gcacagaagttgtccattagactttcaaaccggtattcctacgggcagtttgttgagata
aacagccacagcctcttctcaaagtggttctcagagagtggtaaactggtgactaagatg
ttccagaagatccagcagcttatcgatgacaaagacgctcttgtgtttgttctgattgat
gaggtggagagcctcactgcatcgaggaacgcaagccaagcgggaacggagccttccgac
gccatccgagtggtcaactctgttcttacgcaactagaccaaataaagcgacaccccaac
gtggtgatcctgacgacctccaacgtgacggacaagatcgacctggcgtttgtggaccgg
gcagacatcaagcagtacatcggccccccgtcggagaagggcatctacaacatctacctg
tcctgccttgaagagctcatgaagtgccagataatctaccctcgacgtcagctgtttacc
atgtctgagcttcagaccatgggctttgtggagagtgaggtgtcggatcacagtctgatc
ctgagaaacattgctctaaagagcaaaggtctgagtggaagaacactcagaaagttgcct
ttcttggcccatgccctctttgtaaagacgccgacggtaactttggagcgcttcctggag
gctttggaccaggccgtcaccaaacaaaaggtggagaaagcacacttagccaacagtgtc
tga
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