Gadus morhua (Atlantic cod): 115556872
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Entry
115556872 CDS
T10832
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115556872 (ap5b1)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
115556872 (ap5b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_N
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
115556872
NCBI-ProteinID:
XP_030230130
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All DBs
Position
13:3395848..3400590
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AA seq
978 aa
AA seq
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MAVSWVERVASFLRSPSRFLASTTAEVFLVELLREQRDERVTYDVKLTMLSPLCEHPTLL
CPSACTGEETCLELMSVFSHCPPKYTEFRCQLLLTLTTVLVSTGCVSAHSHASRDFLELL
LKLAQDTYYDPADVPSALRSTRAAACECLRELEACCPSLLSQHLELLNGLRQQENPRHHQ
ALSGLYAVVLRNGVHLLARQAGAGPEGLKALLGGNAAVAWEAEPDSPALTDRAAPLPSVL
GPSGLGPTLQTGPDCKELRSVLSSLLEESYLLTPLSQAALLHALTEVVAMVSGVSPAIFK
AQLLRLLGTSKVCLFHCTLLMKAAFTDSLFSAEDEAFLLKRLVALCQHPQMSTAAQLFYT
DCLVHFPENRPIGAADGGEALPVLLTPRLAASLVPTVFDEPATMLARLNVSALVHLEEHG
AREGGAAGGGLAYLWEHLLLRLHVVEHGGDRAAVVTFFRASFLFLCHFGHVERHAADLRR
RLCALYLRHCRLAPHVLNLADRAQDGPVRPGWAVALLRSLQGVAVSAGGDLAAVSQKDLH
WHLRVLARVAEEGQIGQGSTVDFLFAVATAASPPSRNEDWRLGSDLLAVCRHLLAHPGLD
ALLCPLADVLQHVARHHGDTDVRDHARLYYSLLTALSREKLAGVLANGGGGANGGRQDNK
RVLSAMVVESQDLTSALTIHKARTPVFHLVAKDRAGGWAEPTPAPEDDEAAAAGTEPGAP
DADVLSSYRSQLLSSGAAAEIALSYELRHLDVGPAGFDRLFSLRLHFEPSAGRFAALADV
CVPRLFREGASAAPPAVTLTLRPRAPYPGTLRCSAVFTAQDELTWHAALPDVHVAFRQLF
KPLPVPASWGPALRLRAFERLWDEFCSDGDGGSVGEGGGGDASPDRACSLFCGRLGEAEL
EALLEEHFAPFRVADPGDATGHRVLLFIPPGSHVLLRIRPQEDAVQFHMATDNWRLLPHV
NDFLLSVTDWEARNGVDS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagctgggtcgagagggtcgcctcgttcctccggagtccctcccggttcctc
gcctccaccacggcggaggtgttcctggtggagctgcttcgggagcagcgagatgaaagg
gtgacctacgacgtgaagctcactatgctgtccccgctttgtgagcatccaacgctgcta
tgcccgtctgcctgcacgggggaagagacctgcctggagctcatgtctgtgttctcccac
tgccctcccaagtacacagagttccgctgtcagctgctcctcacactcaccacagtgctg
gtcagcaccggctgcgtcagcgcacactcgcacgcctcccgcgacttcctggagcttctc
ctcaagctggcccaggacacgtactacgaccccgcggacgtgccctcagcgctgcggtcc
acgcgggccgcggcctgcgagtgcctccgcgagctggaggcctgctgccccagcctcctc
tcccagcacctggagctcttgaacggactgaggcagcaggaaaaccccaggcaccaccag
gccctgagtggcctgtacgcggtggtgctgaggaacggcgtgcatctgctcgcccggcag
gcgggggcggggccagagggcctgaaggcgctgctgggagggaacgcggcggtggcgtgg
gaggcggagcccgactcgcccgcgctgacggacagggcggccccgctgccctcggtgctg
gggccctcgggtctggggccaacgctgcagaccgggcccgactgcaaggagctgcgctcg
gtgctctcctcgctcctggaggagtcctacctgctcacgccgctgtcccaggccgccctg
ctccacgcgctgacggaggtcgtcgccatggtttccggcgtctccccggcgatattcaag
gcacagctcctgagactcctgggcaccagcaaggtctgcctgttccactgcaccctgctg
atgaaggcggccttcaccgacagcctgttcagcgccgaggacgaggccttcctcctgaag
cggctggtggccctctgccagcacccccagatgagcacagccgcccagctcttctacacc
gactgcctcgtccacttccccgagaaccggcccatcggggcggccgacggcggggaggcc
ctgccggtgctgctcactccccggctggccgcctccctggtgcccaccgtgttcgacgag
cccgccaccatgctggcccgcctcaacgtgtcggcgctcgtgcacctggaggagcacggc
gcgcgggagggcggggccgctggcggggggctggcgtacctctgggaacacctcctgctg
cggctgcacgtggtggagcacggcggcgaccgggccgccgtggtcaccttcttccgggcg
tccttcctcttcctgtgccacttcggccacgtggagcgccacgccgccgacctgcggcgc
cggctctgcgcgctctacctccgccactgccggctggccccgcacgtcctcaacctggcc
gaccgcgcccaggacgggcccgtgcggccgggctgggccgtggccctgctccggtccctg
cagggcgtggccgtctccgcggggggcgacctggcggcggtctcccagaaggacctccac
tggcacctgcgggtgctggcgcgcgtggcggaggaggggcagatcggccagggtagcacc
gtcgacttcctgttcgccgtcgccaccgcggcgtcccccccgtcccggaacgaggactgg
cgcctgggcagcgacctgctggccgtgtgtcgccacctgctggcgcacccggggctggac
gccctcctctgcccgctggccgacgtcctgcagcacgtggcccgtcaccacggcgacacg
gacgtccgggaccacgcgcgcctctactactcgctgctcaccgcgctgtcccgggagaag
ctggccggcgtgctggccaacggcggcggcggcgccaatggcggccggcaggacaataag
cgcgtgctgtccgccatggtggtcgagagccaggacctgaccagcgcgctgaccatccac
aaggcccgcacgcccgtcttccacctggtcgcaaaggaccgcgcgggcggctgggcggag
ccgaccccagcacccgaggacgacgaggcggcggcggcgggcacggaaccgggagcgccc
gacgcggacgtcctgtcgtcctacaggtcgcagctcctcagctccggcgcggccgccgag
atcgccctctcctacgagctgcgccacctggacgtcggcccggccggcttcgaccggctc
ttcagcctccgcctgcacttcgagccgagcgccgggcgcttcgccgcgctggcggacgtc
tgcgtgccccgtctgttccgggagggggcctcggcggcgccgcccgcggtgacgctgacc
ctgcgtccgcgggcgccgtacccggggacgctccgctgcagcgccgtcttcaccgcgcag
gacgagctcacctggcacgccgccctgcccgacgtccacgtggcgttccgccagctgttc
aagcccctccccgtccccgcctcctggggccctgccctccggctgcgggcgttcgagcgg
ctctgggacgagttctgctccgacggcgacggggggagcgttggcgagggaggggggggg
gacgcatcaccggaccgcgcctgcagcctgttctgcggccggctgggggaggcggagctt
gaggccctgctcgaggagcacttcgccccgttccgcgtggcggaccccggggacgcgacg
ggacacagggtgctgctcttcatcccgccaggctcccacgtgctgctgaggatccgcccc
caggaggacgcggtgcagttccacatggccaccgacaactggaggctcctcccccacgtc
aacgacttcctgctgagcgtcaccgactgggaggcgcgcaacggcgtcgacagttga
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