Gadus morhua (Atlantic cod): 115556947
Help
Entry
115556947 CDS
T10832
Name
(RefSeq) extended synaptotagmin-1-like isoform X1
KO
K28063
extended synaptotagmin
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115556947
Membrane trafficking [BR:
gmh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
115556947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
DUF3885
Motif
Other DBs
NCBI-GeneID:
115556947
NCBI-ProteinID:
XP_030230254
Ensembl:
ENSGMOG00000004194
LinkDB
All DBs
Position
13:complement(5516602..5542838)
Genome browser
AA seq
1884 aa
AA seq
DB search
MQKEESGPPSGSQETKVPKDVQSKAGGGAEIMQAAAAPPGIQAVDVLWTFGKCLGALLPV
YLAGYYRFSTSFLVFGMMIYTGWKHAREAKEARHRSAVELFDNEQEHTSKRVAKSKRDLP
AWVNFPDVEKVEWLNKVLQQVWPFVGQYLEKLLQETIAPSIRGSSSHLQTLSFTKVDFGD
KPMKVVGIKAHTENDRGQVLLDLYISYVGDVEIDVEVKRYFCKAGVKGIQLHGMMRVILE
PLIGDVPIVGAVTMFFIRRPKLVINWTGLTNLLDIPGLNVMSDSMIMDAIAAFLVLPNRL
TVPLVPDLHVAELRSPLPRGVVRIHLVEADDLPAKDNFMKGVMSGMSDPYALLRVGPQTF
TSKHVDNTVCPKWGEIYEVLVHEVPGQELELEVYDKDTDQDDFLGRAKLDLGIVKKSIVV
DDWFSLKDTPSGRVHLRLEWLTLLPSTDRLEQVLKRNETVISKTADPPSAAILVVYLDKA
ESLPMKKGNKEPNPMVQLSVRDLTRESKICYTTENPQWEEAFTFFIQDPQKQDIDIQVKD
GDRVQTLGRLNLPLSRLLSSPSLTLDQWFQLDGSGPASRIYIKTVLRVLWLDEEHVSADV
SSTVAGSQAETLPQQSTPHPSFATEGVLRIGLLAGQNLVPKDNMMGGMVKGKSDPYVKVN
VGGETFTSQVVKANLNPTWNEMYQVVLTQLAGQDLHVEIFDKDMDMKDDFMGRLKISMKD
IVAAQYTDQWYTLNDVKSGRVHLTLEWVPTATEPDRLDQVLQFNSKQAFQNKAVPSSALL
FVYVEQAHGLPLKKSGKEPKVGAEIVLGKSSHKTTVCERTTAPKWNEAFHFLVRDPREDI
LVVKLSHSWALAMGSLVVPVRELLSEPQLVLDQWFHLDGASPESQVLLRAELKVLIPSKC
PGGGVQTKPASGSDPSRTKESMVEDHLLRSSSVDTPPLESAAVPASEVPGGRGSEVAAEV
AAAVSHQEEEEEEEEEEEEDAPPPGPPHTSPDHVFGSEGVLRLHLLEAQSLVAKDNLMGG
LRKGKSDPYAKVTVGEHAFKSHVVKENLNPTWNEMYEVVMRPQAGLEVKVELYDKDMDKD
DFLGRLNVSLADIIQSQCTDQWHPLEDVKSGRVRLVMEWVPMVSQNTSLDQVLQQRSLQS
YQNQTVPTAALLFLYLERGHSLPLKKSGKEPKAAAELVLGQTTHKTKVCARSKSPEWREA
FFFPVQEPREEMLIVKLSSAWDQPMGSLVLPVRDLLSEPELVLDQWFPLDGASPESQVLL
RAELKILQSQMTSVPQATGTVPEVEEVPATAGHHGDRSMEEERGWEVPAQERVPVTSQEA
EEREPVTVDTREEETTVGEDYSIAPELEEPLEEERQVEEERQVEEERPVEEERPVEEERP
VEEERQVEEERQAEEERPVEEERPTSESFSPVRKELQPERSGLDNLAQATVTGLPPDLVP
TLVPEESSPAVVLQPHSNPPQDFATNQGVLRLHLLEAASLVAKDNLMGGMRKGKSDPYVK
VTVGEHAFKSHVVKENLNPTWNEMYEVVLSSQAGQEIHFESYDKDLDADDFLGRFSVMLD
DVIRQQYIDKWYTLKDVKSGRVHLVLEWVPTASTAARLHQVVQLQSGQTFRNQAVPSAAL
LFVHVERAHALPHKKSGKEPKAGAELILGQTTHRTQVCERSSAPQWEESFFFLVRDPERE
MLILKLSSAWDQPMGSLVLPVRDLLSEPQLVLDQWFPLDGALPESQVLLRAELKVLDSKM
VDMLSGGALPCSAAEAARSGQVKLSLSAHEGRLVVTVHACRGLSSTGKDSVDSYVSLMLL
PDKNKATKRKTAVKKRDLNPEFNDSFEYGLSLDEAQRRLLSVSVKDNSASFRGRDVIGQA
QIELAQVNLLKGVTEWFDLTEEAE
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagaagagtcgggaccgccgagtggctcccaggagaccaaggtacccaaggac
gtccagagtaaagcgggcggcggtgcagagatcatgcaggctgcggccgccccgccgggc
atccaggccgtcgacgtgctgtggaccttcgggaagtgcctgggcgccctgctgcccgtg
tacctggccgggtactaccgcttcagcaccagcttcctggtgttcggcatgatgatctac
acgggctggaagcacgcccgggaggccaaggaggctcggcaccgctcggccgtggagctg
ttcgacaacgagcaggagcacacctccaagagagtcgccaagagcaagagagacctgccc
gcctgggtcaactttccagatgtggaaaaggtggaatggcttaataaggtgctgcagcag
gtgtggccgttcgtgggccagtacctggagaagctgctgcaggagaccatcgccccgtcc
atcaggggctccagctcccacctgcagacgctcagcttcaccaaggtggacttcggggac
aagcccatgaaggtggtgggcatcaaggctcacacggagaacgaccgcggacaggtcctg
ctggacctctacatcagctatgtgggcgacgtggagatcgacgtggaagtgaagcggtac
ttctgcaaagcgggcgtgaagggcatccagctgcacggcatgatgagggtgatcctggag
cctctgattggagacgtgccaatagtgggtgcggtcaccatgttcttcatccgcaggccg
aaactggtcatcaactggaccggtctgaccaacctattggatattcctggactcaacgtc
atgtctgacagcatgatcatggacgccatcgccgccttcctggtcctgcccaacaggctc
acggtgccgctggtcccggacctccacgtggccgagctgcggtctcccctgcccaggggc
gtggtccgcatccacctggtggaggccgacgacctgcccgccaaggacaacttcatgaag
ggggtgatgtcgggcatgtcggacccctacgccctgctcagggtgggcccccagaccttc
acctccaagcacgtggacaacaccgtctgtcccaagtggggcgagatatacgaggtctta
gtccatgaggttcctggccaggagttggagttggaggtttatgacaaagacaccgaccag
gatgacttcctgggcagggcgaagctggacctgggcatcgtgaagaaatccatagtggtg
gacgactggttctccctgaaagacacgccgtctggacgcgtccatctgaggttggagtgg
ctgaccctgctgccctccacggaccgtctggagcaggtcctaaagaggaacgagaccgtg
atcagcaagaccgccgaccccccctcagccgccatcttggttgtgtatctggacaaggcg
gagtcacttcccatgaagaaaggcaacaaggagccgaaccccatggtgcagctgtctgta
cgagacctcaccagggagagcaagatctgttacaccaccgagaacccccagtgggaagag
gccttcaccttcttcatccaggacccccagaaacaggacatcgacatccaggtgaaggac
ggggaccgcgtgcagaccctgggccgcctgaacctacccctgtcccgccttctgtccagc
cccagcctgaccctggaccagtggttccagctggacggctccggccccgccagccgcatc
tacatcaagaccgtcctcagggtgctgtggctggatgaggagcacgtctccgctgacgtg
tcctccaccgtggcggggagccaggccgagaccctgccccagcagagcacaccccatccc
agcttcgccaccgagggcgtgctccggatcggcctgctggcggggcagaacctggtcccc
aaggacaacatgatgggaggcatggtgaagggcaagagcgacccctacgtcaaggtcaac
gtagggggggagaccttcaccagccaggtggtcaaggccaacctcaaccccacctggaac
gagatgtaccaggtggttctgacccagctggccggccaggatctccatgtggagatattt
gataaagacatggacatgaaggacgacttcatgggcaggctgaagatcagcatgaaggac
atcgttgctgcgcagtacaccgaccagtggtacacgctgaacgacgtcaagtccggccgg
gtccacctcacgctggagtgggttcccacggcaacggaaccggaccgcctggaccaggtt
ctgcagttcaactccaagcaggcgttccagaacaaggcggtgccctcctcagccctgctg
ttcgtctacgtggaacaggcgcacggcctgcctctcaagaagagcgggaaggagcccaag
gtgggggcggagatcgtcttggggaagtcctcccacaaaaccaccgtgtgcgagcgaacc
acggctcctaaatggaacgaggcgtttcacttcctggttcgtgaccccagagaagatatt
ctcgtggttaagctgtcccacagctgggctctggccatgggctccctggtggtgccagtg
agggagctgctgtctgaaccacagctggtcctggaccagtggttccacctggacggagcc
tcacctgagagccaggtgctgctgagggcggagcttaaggtgttgataccctctaagtgc
ccgggtgggggtgtccagaccaagccagcgtccgggtcagacccctccaggactaaggag
agcatggtggaggaccacctgctcaggtcgagttctgtggacacgccccctctggagagc
gctgcggtgccggcctctgaggtcccggggggccgtggctccgaggtagcagctgaggta
gccgccgctgtgtcccatcaggaggaggaagaggaggaggaggaggaggaggaggaggac
gctcctccccccggccctccccacacctccccagaccacgtcttcggcagcgagggggtg
ctgaggctgcacctgctggaggcgcagagcctggttgccaaagacaacctgatggggggc
ttgaggaagggcaagagtgacccctacgccaaggtcacggtcggagagcacgccttcaag
agtcacgtggtcaaggagaacctgaaccccacttggaacgagatgtacgaggttgtgatg
aggcctcaggctgggctggaggtgaaggtggagctgtacgataaggacatggacaaagat
gacttcctgggcagattgaatgtcagcctggcagacatcatccaatcacagtgcaccgac
cagtggcacccactggaggacgtgaagtccggccgggtccggttggtcatggagtgggtc
cccatggtgtcccagaacaccagcctggaccaggtgctgcagcagaggtcgctccagtcc
taccagaaccagaccgtcccgacggcagcgctgctcttcctgtatctggagagaggccac
tcgctgcccttgaagaagagcgggaaggagcccaaggccgcagcagaactggtcctgggt
cagaccacccacaaaaccaaggtgtgcgctcgctccaagtcccccgagtggagagaggcc
ttcttcttccccgtccaggagcccagagaggagatgctcatcgtgaagctgtccagtgcc
tgggaccagcccatggggtccctggtgctcccagtcagagacctgctgtctgaaccagag
ctggtcctggaccagtggttccccctggacggagcctcacctgagagccaggtgctgctg
agggcggagcttaagatcctccagtcccagatgaccagcgttccccaggcaacagggacg
gtccctgaagtcgaggaggtcccggccaccgctggtcaccatggtgaccggtcgatggag
gaggagagaggctgggaggtgccagctcaggagagggttccagtgaccagccaggaagcg
gaggagagagaacctgtgaccgtggataccagagaagaagagacaactgtcggtgaagat
tattccattgctcccgagttggaggagccactagaggaagagaggcaagtagaggaagag
aggcaagtagaggaagagaggccagtagaggaagagaggccagtagaggaagagaggcca
gtagaggaagagaggcaagtagaggaagagaggcaagccgaggaagagaggccagtagag
gaagagaggccgacctctgagtccttctccccagtgaggaaagagcttcaaccagagaga
tctggcctagataatctggcccaagccacagtgaccggccttcccccagacctggtccca
accctggtccccgaggagtccagcccggctgtggtcctccagcctcactccaacccccct
caggactttgccaccaaccagggggtgctgaggctgcacctgctggaggccgcgagcttg
gttgccaaggacaacctgatggggggcatgaggaagggcaagagtgacccctacgtgaag
gtcaccgtcggagagcacgccttcaagagtcacgtggtcaaggagaacctgaaccccacc
tggaacgagatgtacgaggtggtgctgagttcccaggccggccaggagatccactttgag
tcctacgataaggacctagacgccgatgacttcctgggcaggttcagcgtaatgcttgat
gatgtcatcagacagcagtacatcgacaagtggtacaccctgaaggacgtgaagtcaggc
cgggtccatctggtgctggaatgggttcctactgcctccaccgccgccagactccaccag
gtggtgcagctccagtccggacagaccttcaggaaccaggcggttccctccgccgctctg
ctgttcgtccacgtggagcgagctcacgccctgccccataagaagagcgggaaggagccc
aaagccggagcagagctgatcctgggtcagaccacccacagaacacaggtgtgtgagcgc
agctccgcccctcagtgggaggagtcattcttcttcctggtccgggacccggagcgcgag
atgctgatcctgaagctgtccagtgcctgggaccagcccatgggttccctggtgctccca
gtcagagacctgctgtctgaaccacagctggtcctggaccagtggttccccctggacgga
gccttacctgagagccaggtgctgctgagagcggagcttaaggttctggattccaagatg
gtggacatgttgagcggtggcgcgctgccttgctcggcagcggaggcggcgaggagcggc
caggtgaagctgtccctctccgcccacgagggacggctggtcgtcaccgtccacgcctgc
aggggtctgtcgtctacggggaaggactccgtcgacagctacgtctccctcatgctgctg
ccggacaagaacaaggccaccaagaggaagacagcggtgaagaagagggacctgaatcca
gagttcaacgacagtttcgagtacgggctgtctctggacgaggcccagcgccggcttctc
agcgtcagcgttaaggacaactccgcctccttcaggggccgcgacgtgattggacaggca
cagatcgagctggctcaagtcaacctgctgaagggggtcactgagtggtttgatctgacg
gaggaagctgagtag
DBGET
integrated database retrieval system
