Gadus morhua (Atlantic cod): 115557473
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Entry
115557473 CDS
T10832
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115557473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115557473
Transporters [BR:
gmh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115557473
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
115557473
NCBI-ProteinID:
XP_030231194
Ensembl:
ENSGMOG00000003748
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Position
13:20132706..20155779
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AA seq
609 aa
AA seq
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MTAEKSGPVVNGKQGEDPEGSAASVDKQEYHERGHWNNKIEFFLSVAGEIIGLGNVWRFP
YLCYKNGGGAFFVPYVIFFVCCGIPVFFLETAMGQFTSEGGITCWRKVCPLFEGIGYATQ
VIQAHLNVYYVVILAWAIFYLFNCFTTELPWANCGHYWNTENCVDMYGANATNFTNPNAT
SPVIEFWERRVLKISDGIEHMGSIRWELAFCLALAWFICYFCIWKGPKSTGKVVYVTATF
PYAMLLVLLIRGVTLPGAWEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTAL
GSYNAYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMALEQGVPIEAVAESGPGLAFI
AYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDLYPETFRRGYRRELLI
LGMSVVSFCVGLIMCTEGGMYVFQLFDSYAASGMCLLFVAIFESIAIGWVYGSDRFYSNI
EDMIGYKPVFFIKWCWMILTPGICAAIFLFFLIKYKPLKYNNVYTYPDWGYGIGWFMAMS
SMVCIPFGMIWMIWKTPGTFSERMKKLTTPSPDLKMRGKLGTTSPYAVNDAKPKADGKVS
AHTEKETHF
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaaaagagcgggcccgttgtaaacggtaaacaaggcgaggaccctgaaggc
tcagccgccagtgtggacaagcaggagtaccatgagaggggccactggaacaacaagatc
gagttcttcctgtccgtcgccggggagatcatcggcctcggcaacgtctggaggttccct
tacctctgctacaagaatggaggaggggccttcttcgtaccgtacgtcatcttctttgtg
tgctgtggcatccccgtgttcttcctggagaccgccatgggccagttcaccagcgaggga
ggcatcacgtgctggaggaaggtctgcccgctctttgaggggattggctacgcaacccag
gtgattcaggctcatctaaacgtctactacgtggtcatcctagcctgggctatcttctac
ctcttcaactgctttaccaccgagctgccctgggctaactgcggccactactggaacaca
gagaactgtgttgacatgtatggagcgaacgccaccaacttcacaaacccaaacgccact
tctccggtcattgagttctgggaacgcagagtgctgaagatatcagatggcatcgagcac
atgggcagtattcgctgggagctggccttctgtctggccctggcctggttcatctgctac
ttctgcatctggaagggacccaaatctaccggcaaggtggtgtacgtgacggccacattc
ccctacgctatgctgttggtcctgctgatccgaggggtgacactgccaggagcctgggag
ggcatcaagttctacctctacccggacatctcccgcctctcagaccctcaggtatgggtg
gatgcagggactcaaatcttcttctcatacgccatctgcttgggctgtctcactgctttg
ggcagctacaacgcctacaacaacaactgctacagggactgcctcatgctgtgctgtctg
aacagcggcaccagcttcgtggcgggcttcgccatcttctccgtgctgggcttcatggcc
ttggagcagggcgtccccatcgaggcggtggccgagtcgggtcccggcctggccttcatc
gcctaccccaaggcggtcaccatgatgcccctgtccccactctgggcctgcctcttcttc
atgatgctcatcttcctcggactggacagtcagtttgtgtgtgtggagagtctggtgacg
gccgtggtggacctgtaccccgagacgttcaggaggggctaccgcagagagctgctcatc
ctgggcatgtcggtcgtctccttctgcgtaggactcatcatgtgcacagagggcggaatg
tacgtgttccagttgtttgattcttacgcggcaagtgggatgtgtttgctgtttgtggcc
atatttgagtctatagccatcggctgggtctacggaagtgacaggttctactccaacatt
gaggacatgattggctacaagccagtcttcttcatcaaatggtgctggatgatccttacc
ccgggcatctgcgctgccatcttcctcttcttcctcatcaagtacaagcccctgaagtac
aacaacgtgtacacttacccggactggggctacggcatcggctggttcatggccatgtcc
tccatggtctgcatcccgttcgggatgatctggatgatctggaagacccccggcaccttc
agcgagaggatgaagaagttgaccacaccgagtccagacctgaaaatgagagggaaactc
ggaaccacgagtccttacgccgtcaacgatgcaaaaccaaaggctgacgggaaagtatcc
gcccacacagagaaggagacgcatttttaa
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