Gadus morhua (Atlantic cod): 115559269
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Entry
115559269 CDS
T10832
Symbol
cngb1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
115559269 (cngb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115559269 (cngb1)
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115559269 (cngb1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
115559269
NCBI-ProteinID:
XP_030233923
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Position
14:complement(2842462..2879336)
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AA seq
1153 aa
AA seq
DB search
MLSWVGKVVPQPPEACEEKPEARPSAAEKKVTFKEESKKAVTLKEEEASEDSSAQPRVLT
WISHSLAHALPQPAGLAKPDNKEENEKISNPEPNQGVMGWIVQGIEKVVPQPDEKYKKQP
EQEDDVTEVHYVADVPDAEPLAHIPVVEVESEPEEEEEKPLQLQPRMMEWLKQGIEKVVP
RPEIYIHVPHEGAAQSQKKAEEAPAPAGDTENVVGWIVGGIGRMLPQPVLKKDNNDGVEN
IIIVQDPSDMVLEEVDPDWDKKERVQQPPQENQELPAEDAGTQTGTIEGQAEQSMLAQME
ERLQRERLEAARIAEDMAWRAAEAAVRQLEEEQRTAIIVEDPPPEASEQLPNILEEENED
EPECSPPTEAPCVAPPAPTPSVKKETVSEKSDSMSQVAPAVTTQPDTTQPDTTQPDTGPV
DQLSEVVAEIERLQKTSGGCAPPTLRVEDVVEDEETILARLSGAYQDGAVDKKTHLTAED
EGRPASAASLGSVMVTERLSELVQLFKGRTEFRRERLVDPDESDDEDMPVAAPPPPPPPP
PPEDVKKDASAEGAGDGEEEKEELEIYYDFFGYPIKLPALPKLPPMPDWLRVVFEYRFPS
SIDPYTDFLYVMWLLCVVMAWNWNLWLIPVRWAFPYQTPENVHLWLLMDYTCDLIYITDM
VVFQTRLEFVRGGDIVCDKKDMRDHYMTTERFKMDMICLFPMEVFYYFTGVNSLLRFPRL
LKYMVFNEFNDRVEAVMKKAYIWRVMRTTAYLLYSLHINACLFYWGSDYEGLGSTKWVYN
GKGNAYIRCYYFAVKTLITIGGLPDPTTVFEIVFQLLNYFTGVFAFSIMIGQMRDVVGAA
TAGENYYRACMDSTVKYMTSYHIPRDVQNRIKTWYDYTWKIQGMLDEQELLIQLPDKMRL
DMAVDVNYSIVSKVALFQGCDRQMVFDMLTRLKSVVYLPGDFVCKKGEIGREMYIIKQGE
VQVVGGPDLQIVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGFVNVFILDKKDLAEIL
VHYPESQKLLRKKAKTMLTKDKKTDAKVDKGTVEVITMRPPTPELFKAALQVTEEAGLEG
TFAKLKKSYMATEGDVPPPSPMRRRSPIPRAPPPGDEDAVSETTDGSLVIRMTPRVGGEE
LLSVERGCKAKEE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgttaagctgggtgggtaaagtggttccccagcccccagaggcctgcgaggagaaacca
gaagcacggccttctgcagctgagaagaaggtgacattcaaggaagaaagcaaaaaagcg
gtgacactaaaagaagaggaggcgtctgaggacagcagtgcccagcccagggttctgaca
tggatttcccacagcctggcccacgctctcccccagccggcaggactcgccaagcctgat
aacaaggaagaaaatgagaaaatcagcaatccggagccaaatcaaggtgtgatgggctgg
attgtccaagggattgaaaaagtggtgccgcagccagatgagaagtacaagaagcagcca
gagcaagaggacgacgtgacggaggtgcattacgtcgcagatgtaccagatgctgagcct
ctcgcccacatccccgtggtggaggtggaatctgagccagaggaggaggaggaaaagcct
ctccaactgcagcccaggatgatggagtggctgaagcaaggcatcgagaaggtggttccc
cgtcccgagatctacatccacgtcccccacgaaggcgcggcccagagtcaaaagaaagct
gaggaggctccagctccggcgggcgacacggagaatgtggtaggctggatcgttggaggc
attggtcgcatgctgccccaacctgtgctgaagaaggacaacaacgatggagtggagaac
atcatcatagtccaggacccatcagacatggtcctggaggaggtggacccagactgggac
aagaaggagcgggtccagcagcccccccaggagaaccaggagttgccggcggaagatgcg
gggacacagactggcaccatcgagggccaggcggagcagtccatgttggcccagatggag
gagcggctgcagcgggagcgcctggaggcggcccgcattgcggaggacatggcctggagg
gcggccgaggcggcggtgaggcagctggaggaggagcagcgcaccgccatcatcgtggag
gacccgcctccggaggccagcgaacaactgcccaacatcctggaagaggagaacgaagac
gaaccagagtgctcgccccccaccgaagccccatgcgtggcccccccggcgcccaccccc
tctgtgaagaaggaaacggtgtcagagaagagcgacagcatgagtcaggtcgcccccgcc
gtcaccacccagcccgacaccacccagcccgacaccacccaaccagacacaggaccggtc
gatcagctgtccgaggtcgtggctgaaatagagcgtctccagaagacctccgggggctgt
gctcctcctacgctcagagtggaggatgtagtcgaggatgaagagaccatcctggcaagg
ctcagtggcgcttatcaagacggagcggtcgacaagaagacccacctgacggctgaggac
gagggccgacctgcgtccgccgccagcctgggcagtgtgatggtcaccgagcggctgtct
gagctggtgcagctcttcaaaggcaggacggagttccgcagggagcggctggtggatccg
gacgagtcggatgatgaggatatgcccgtcgccgctccacctcctcctcctcctcctcca
cccccagaggacgtgaagaaggacgcctccgccgagggagccggggacggggaggaggag
aaggaggagctggagatatactatgacttcttcgggtaccccatcaagcttcctgcgctg
cccaagctgccccccatgcctgactggctccgcgtcgtctttgagtaccgcttcccctcc
agcatcgacccgtacaccgactttctgtatgtgatgtggctgctatgcgtggtcatggcg
tggaactggaacctgtggctgatccctgtacgctgggccttcccataccagacgcctgag
aacgtgcacctctggctcctcatggattacacctgcgacctcatctacatcaccgacatg
gtcgtcttccaaaccaggctggagttcgtccgtggtggagacattgtgtgtgataaaaag
gacatgagagaccactacatgaccacagagagattcaagatggacatgatctgcctgttt
cccatggaggtgttttactacttcactggagtcaactcccttctgcggttcccccgactg
ctcaagtacatggtcttcaatgagttcaacgaccgcgtggaggccgtgatgaagaaggcc
tacatctggagggtcatgcgcaccacggcttacctactgtactccctgcacatcaacgca
tgtctcttctactggggctccgactatgagggactagggtcgaccaaatgggtctacaac
ggcaaaggcaacgcgtatatccggtgctactacttcgccgtgaagaccttgatcaccatc
ggagggctgcctgaccccaccactgtcttcgaaatcgtcttccagctcctgaactatttc
acgggcgtctttgccttctccatcatgattggtcagatgagagacgtggtgggggcggcc
acggcgggcgagaactactaccgagcgtgcatggacagcaccgtcaagtacatgacctcc
taccacatcccccgggacgtccagaaccggatcaagacctggtacgactacacctggaag
atccagggcatgctggacgaacaagagttgctgatccagctccctgataagatgaggctg
gacatggccgtggacgtcaactactccatcgtcagtaaagtagctttgttccagggatgc
gacagacagatggtctttgacatgctgacaagactcaagtctgttgtctacctccccgga
gactttgtctgcaaaaagggcgagatcggcagggagatgtacatcatcaagcagggcgag
gtccaggtggtgggggggccggacctgcagatcgtcttcgtcaccatccgagccggctcc
gttttcggggagatcagcttgctggccggaggcggaggcaacaggcgcacggccaacgtt
aaagcccacggattcgtcaacgtctttatcctggataagaaggacctggccgagatcctc
gtgcactaccctgagtcccagaaactgctgaggaagaaggccaagacgatgctgaccaag
gacaagaagacggacgctaaggtggacaaggggacggtggaggtgatcacgatgcgaccg
ccgacccccgagctgttcaaggcggcgctgcaggtcaccgaggaggcggggcttgaggga
accttcgccaagctgaagaagagctacatggctaccgagggagacgtcccgcctccctct
ccgatgcgccgacgctcccccatcccgagggccccgccccccggggacgaggacgcggtc
tccgagaccaccgacggctcgctggtgatccgcatgaccccccgggtcgggggggaggag
ctactcagcgtggagcggggctgcaaggccaaggaggagtag
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integrated database retrieval system
