Gadus morhua (Atlantic cod): 115561281
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Entry
115561281 CDS
T10832
Name
(RefSeq) septin-5 isoform X1
KO
K16943
septin 4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115561281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115561281
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115561281
04812 Cytoskeleton proteins [BR:
gmh04812
]
115561281
Membrane trafficking [BR:
gmh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
115561281
Cilium and associated proteins [BR:
gmh03037
]
Motile cilia and associated proteins
Sperm associated proteins
115561281
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
115561281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AIG1
VapE-like_dom
Ras
ABC_tran
AAA_16
Roc
AAA_29
nSTAND1
AAA_22
Motif
Other DBs
NCBI-GeneID:
115561281
NCBI-ProteinID:
XP_030237076
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All DBs
Position
16:complement(17062430..17098416)
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AA seq
589 aa
AA seq
DB search
MGPGAVIELNGLKDTVTCWDGWGGIKGLWTLFFFWFGLLQCEYRPGSTELSRQVVLNRES
RVGKVCPAECTEAPVAMEESDHEALSSSDEQDSGPDFPPPPLHHHHHQQHTGNHDFEQPL
SPSEDYELESIMGGHHLPHPPQEGHHDLAGPHHAIDLCDADRECEGLDRPHTPSYLRPPV
AGSSDSGSSPVLSYDGGAEDYDLPSPNCPCRPKSPWNRFDPYESTEDQDKEYVGFATLPN
QVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYKDRRLLNAEERITQTVEITKHT
VDIEEKGVKLKLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNR
VHCCLYFISPFGHGLRPLDVEFMKALHEKVNIVPVLAKADTLTPMEVRRKKIKIREEIEQ
YGIKIYQFPDCDSDEDEDFKQQDQELKDSIPFAVIGSNTVVEAKGKRVRGRLYPWGIVEV
ENQSHCDFIKLRNMLVRTHMQDLKDVTRETHYENYRAHCIQSMTRMVVKERNRNKLTRES
GTDFPIPPAGGGVDGETEKLIREKDEELRRMQEMLTKIQEQMHTQRDAY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgggccctggggcagtgattgagctcaatgggctgaaggacactgtgacctgctgggat
ggatgggggggtataaaaggtttatggactctgttcttcttctggtttgggctcctgcag
tgtgaatacagaccaggttccacagagctgagcagacaagttgttctaaacagagagagc
cgtgtaggtaaggtgtgcccggcagagtgcaccgaggccccggttgcaatggaggagagc
gatcatgaagccctctcctcttctgatgagcaggactctggccctgactttcctcctcca
cccctgcaccaccaccaccaccaacagcacactgggaaccatgactttgaacagccgttg
agtccttcggaggactatgagctggagagcatcatggggggccaccacctaccccacccc
ccccaggaggggcaccatgacctcgcgggcccccaccacgccatcgacctctgtgacgca
gacagggaatgcgagggcctggatcgtccgcacaccccgtcttacctgcggccccccgtg
gcgggcagctcagactcgggctccagccccgtgttgtcgtacgacgggggggcggaggac
tatgacttgccttcccctaactgcccctgcaggccaaagagcccctggaaccgatttgac
ccctatgagtctactgaggatcaagacaaagaatatgtgggtttcgccactctgccaaac
caggtgcaccgcaaatccgtcaagaagggctttgacttcacactcatggttgcaggagag
tcaggcctgggtaagtctaccctggtcaacagcctcttcctcacagacctctataaggac
aggaggctgctgaacgccgaagagcgaatcacgcagacggtagagataaccaagcacacg
gtggacatagaggagaaaggagtcaagctgaagctcactatagtggacactccaggcttt
ggggacgcggtgaacaacacagaatgctggaagccagtggctgactacattgaccagcag
tttgagcagtacttcagggacgagagcggcctgaaccgcaagaacatccaggacaaccgg
gtgcactgctgcctgtattttatctcaccatttggacacggtttgcggcctctggatgtg
gagttcatgaaagctctgcatgaaaaggtcaacatcgtccccgtcttggccaaagccgac
acgctcacccccatggaggtccggaggaagaaaatcaagatccgagaggagattgagcag
tacggcatcaagatctaccagttccccgactgtgactctgatgaggacgaggacttcaag
cagcaggaccaggagctgaaagacagcatcccgtttgctgtgatcggcagcaacacggtg
gtggaggccaagggcaagagggtgcgtgggcgtctgtacccgtggggtatcgttgaagtg
gagaaccagtcccactgtgacttcatcaagctgcgcaacatgctggtgcgcacacacatg
caggacctgaaggacgtgacgcgggagacccactacgaaaactaccgggcccactgcatc
cagagcatgacccgcatggtggtgaaggagcgcaaccgcaacaagctgaccagggagagc
ggcacggacttccccatcccaccggcgggcgggggggttgacggcgagacggagaagctc
atccgagagaaggacgaggagctgcggcggatgcaggagatgctgaccaagatacaggag
cagatgcacacgcagagagacgcctactaa
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