KEGG   Gadus morhua (Atlantic cod): 115561353
Entry
115561353         CDS       T10832                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmh04121]
    115561353
Ubiquitin system [BR:gmh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     115561353
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SPT8 Auxin_resp
Other DBs
NCBI-GeneID: 115561353
NCBI-ProteinID: XP_030237201
Ensembl: ENSGMOG00000033322
LinkDB
Position
16:19878472..19904980
AA seq 2263 aa
MAKNRNISLLESELYFLISRFLTTGPCRRTAEILASEIQEYQLLPRRLDWQGNEHPRTYE
DLVAAHRHIAPDHLLQICKQLGPLLDKDVPSCVPGVHSLLGSGKQSMLRKAKDCDSVWLK
ASSYAALHRGRPPERPLNSKKPPHLVEVCRGRELTGCQRFSSINPVSNYQHMRLHRRILG
HLSAVYCIAFDRAGLRIFTGSDDCLVKIWSSFDGSLHSTLRGHSAEITDLAVSYENTLIA
AGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPYAKGSKRYMLSTGTDATVCFWQWD
VNNINFSDRPHKFIERPRPGVQTVCSSFSPGGMFLATGSTDDVIRIYFLGCGNPEKVSEL
HEHTDKVDSIQFCHSSERFVSGSRDGTARVWRLHHRQQWRCILLNMSDTLPGADATTGED
MYFKPKVTMVAWDRHDNTVITAVNNHILKVWNSYTGQLLHILKGHEAEVFVLEPHPFDPR
IILSAGHDGSVFIWDLQRGVKTQHYFNMIEGQGHGAVFDCKFTPDGQRFACTDSHGHLLI
FGFGSSKPYEKLPEQVFFHTDYRPLIRDANGFVLDEQTQQAPHLMPPPFLVDVDGNPHPP
RFQRLVPGRENISAEHLVPQLGYVATSDGEVVEQVISQQTSDHEETAARRSALDEAIRQL
QQQQDQAGGTGGTGGAGGGAQVVGPAAAVRQAAVSDDQALMPAPAAPNTPRRAASVNDRA
DVQSPPNVGLRRSGQVEGVRQMHQNAPRSQMATERDLQAWRHRVVVPELQPSGYREQDDF
RTAKGEEEIGLYIARKRRVAYGSFRDDSEEELPSVKRAQARKKQRHQAIFGSDSPDRVEA
FLDLSCEEGEETASSEENEFDGSALDTSNDEEEWHSESPSHTSSDYSDWTADAGINLQPS
TPLSSRKRARRPLSSSEEEEDAAAEDEEEKRQSDEESSGVKKSKQKARKPKSKAPRRPKP
RPSINREVSNEFRPSLWITDVIPRKSPFVPQMGDEVIYFRQGHEAYVEAVSRNALYPINL
EKQPWKKMVLRDQEFVKITGIKYEVCPPTLCCLKLTLIDHGTGKITDKSFSVKYHDMPDV
IDFLVLRQNYDEARRTNWKPGDRFRSVIDDAWWFGSIVCQEPYQAPYPDSHFQCFKVKWD
NGETEKLSPWDIERISDIDQRPETDGGGIPVTAEEMSELMYKPLDGEWGDRCRDEECERI
IAAIDQLITVEIAAPFSGPVDIVQYPTYCTVIAYPTDLGTIRLRLINRFYRRLSALIWDA
RYIAHNARTFNEPRSKIAHSAKLITNVLQKFVNDPSCTDIMEIYNAVEEMDDDDEDDEAE
APGTSTGHRLRQRSEEVLPDRDAWKGQCKSLINYIFDCEDSEPFRQPVNPNNYPDYLDII
HAPMDFGTVKRVLEDDRYDNPIELCKDTRLIFANARAYTPNKRSKIYSMTLRLSAFFEER
IRRILSEYKTAVKSSERLRRSQRFRKKMQQGEPSGVGASSSQKRAAVKTQEKVESMSVTK
PTSTKVSAPERARRRSRNSSSDSKAASSSPASESESEEEKRPGSARRQRETRGKARDRRI
PTRKRVADSESEEEEEEEEAAFSSEPEESEDGDRVASSNSSRRRYPSRSKTSKSTRLTRT
STAPDRRRPAARTPMNGQAARSSRREKSRRHDDDSQASSQDEDEEEKEELGDHAGHRFLK
RKTARAAINKMKLLDASDEDYEEEEKEAKKLKKSSGSRLRQTPRISKRTAVIQSDSDSED
VSSAQASQTKEESTADSKDEESDASASPKPQQNGDDSPSKHKAKKEASRTEGREDSSQVN
GHSAKPQKADSDSDQHDEGSSEEEESKAVAALSRTHSKVNAAASARRSKVTPVASEEDEV
ADTKSRPVRRRPAVDSDSEDEDYVPEKNPFQQNGRRAAREDQGDKSGGKVKAPLKRDDAE
SEDLSDAPKGRREHRREPESEEEEEEDAGSNYSDEGRKKTQRHKSKSKRSRGTSHSESSE
QEYKPRKRQRRNRSAGSSDKTSDEELEKRPRTRALPKKKNISEESAEDSAEDFASKDRVK
QRNGRISATSAEDTPVRKSSRISPDEITRKARSKRRRTSDTSDSEDGDKDQSAKTNRNSK
EISAKSGSSKSSKPPQRESRGKPKPEPISSQEEASSQSASDDEKDAAASRSRRGKKDVLR
PKCKREDGYRSNSSALESEEQSSSSEHSVSSGSHGSSSPKRKGHIRPAGGSKRMPRRPLR
EPSRRAAARREAESDESSSNQLRRTNVTTRNRGRQMVTYNDSE
NT seq 6792 nt   +upstreamnt  +downstreamnt
atggccaaaaatcggaatatttcgctccttgagtcggagctgtattttctgatttctcgt
tttctaacaacgggtccttgtcgaagaacggccgagattctagccagcgaaattcaagaa
taccagcttttacccaggagattagactggcaaggaaatgagcaccccagaacatacgaa
gatttggttgcagcccacagacatattgcaccagatcatttgcttcagatatgcaagcag
ctaggacccctccttgacaaagacgtaccgtcatgtgtccctggtgtgcattctcttctg
gggtccggaaagcagtcaatgcttcgaaaagcaaaagactgcgacagtgtctggctgaaa
gcctcgtcatatgcagcccttcacaggggcagaccaccggagaggcctttgaactccaag
aagcccccacacctagtggaggtgtgcaggggaagagaactaacaggatgtcagagattc
agctccatcaaccctgtcagcaactatcagcacatgaggctgcacaggcgcattctggga
catctatctgcagtgtactgtattgcattcgaccgtgccggcctcaggatcttcactggc
tcagacgactgcctggtcaaaatctggtcgtccttcgacgggagtctccactccacgctg
cgcggacactctgcagagatcacagacctggcggtcagctacgagaacacgctgatcgca
gcgggcagctgtgacaagaccatccgcgtatggtgccttcgtacctgtgcccctgtggcc
gtgctccaggggcacagtggatcaattacctccctacagttctcaccatatgccaagggc
tcaaaacgttacatgctttctactggaactgatgctactgtctgtttctggcagtgggat
gtcaataatatcaactttagtgatcggccgcacaagtttatagagagaccaaggccggga
gtacagaccgtgtgctcctcattcagtccaggcggtatgttcttggcaacgggcagcaca
gacgatgtcatcagaatatactttttgggatgtgggaatcccgagaaagtgtcggagctc
cacgagcacacagacaaagtggacagcatccagttctgccactcgtcagaaaggttcgtg
agcgggagtcgggatggaacggcgcgggtctggaggctccaccaccggcagcagtggaga
tgcattctgctgaacatgtcggacactcttccaggtgctgatgcgaccaccggagaggac
atgtacttcaagcccaaggtcaccatggtggcttgggatcgccatgacaacacggtcatc
acggccgtcaacaaccacatcctcaaagtgtggaactcctacacggggcagctgctacac
atcttaaagggccacgaggcggaggtgtttgtcctggagccccatccctttgacccccgg
atcatcctctccgccggccacgacggcagtgtcttcatctgggacctgcaacgaggagtc
aagacgcagcattacttcaacatgattgagggccagggtcatggagccgtgttcgactgt
aagttcacccccgacggccagcgcttcgcctgcacagactcccacggccacctgctcatc
ttcggctttgggagttccaagccctacgagaagcttccagagcaggtgttcttccacacg
gactaccggccgctgatcagagacgccaacggctttgtgctggacgagcagacccagcag
gcgccccacctgatgcccccgcccttcttggtggacgtcgatgggaatccgcacccgccc
aggttccagcgacttgtcccagggagagagaacatctcggccgagcatctggtgccccag
ttgggctacgtcgccaccagtgacggcgaggtggtggagcaggtcatcagccagcagacc
tcggatcacgaggagacggcggcgcgacgcagcgctctcgatgaggccatccgccagctg
cagcagcagcaggaccaggccgggggtacggggggtacgggtggcgctggtggtggagcc
caggtggtgggaccggcggcggcggtgaggcaggccgcagtatctgatgaccaggctctg
atgcctgccccggcagccccgaacacgccacgcagagcagcgtcggtgaacgaccgtgcc
gatgtgcagtcgccgcccaacgtgggcctgcgtcgcagcgggcaggtggagggcgtccgc
cagatgcaccagaacgccccgcgcagccagatggccacggagagggacctgcaggcctgg
aggcaccgcgtggtggtgcctgagctccagcccagtggctacagggaacaggacgacttc
aggacagccaaaggagaagaagagattggcttgtacatcgccaggaagagaagggtggcc
tacggcagctttcgggacgactctgaggaagagctgccctctgtgaagcgagcgcaggcc
cgcaagaagcagaggcaccaggcaatcttcggctctgacagtcccgaccgagtggaggcc
ttcctggacctgtcctgcgaggaaggagaggagaccgccagctcagaggaaaatgaattc
gatggcagtgcactggatacatcaaatgacgaggaggaatggcacagcgagagcccaagc
cacacatccagcgactactctgactggacggcagacgccgggatcaacctgcagccctcg
actcccttgtcgtcacggaaacgggcacgccggccgctgagcagctcggaggaggaggag
gacgcggcggcggaggacgaggaggagaaacggcagagcgatgaggagtcatctggagtg
aagaagagcaaacagaaggccaggaagcccaaaagcaaggcgccaaggcgccctaaaccc
aggccatcgattaaccgagaggtgtccaacgagttcagaccctccctgtggatcactgac
gtcattccccggaagtctccctttgtcccccaaatgggagacgaggtgatctacttccga
cagggccacgaggcttatgtggaagcggtgagccgcaacgcattgtaccctattaacctg
gagaagcagccctggaagaagatggtgctccgggaccaagagtttgtgaagatcacaggg
atcaaatatgaagtgtgtcctccgacgctctgctgtttaaagctcactctgattgaccac
ggcacaggaaagatcacagacaagtccttctctgtcaagtatcatgacatgccggatgtg
atcgatttccttgtgctgaggcagaactatgacgaagcccggagaaccaactggaaacca
ggtgaccgcttccgctctgtgattgacgacgcctggtggttcgggtccatcgtgtgtcag
gagccttatcaggccccctacccagacagccacttccagtgctttaaagtcaaatgggac
aatggagagacggagaagctgagcccttgggatatcgagcggatctctgacattgaccag
cggccagagacggacggcgggggcatccccgtgacggcagaggagatgagcgagctcatg
tacaagcccctcgatggggagtggggcgaccgctgcagggatgaagagtgcgagcgcatc
atcgccgccattgaccagctcatcactgtcgagatcgccgctcccttctcgggcccggtg
gacatcgttcagtaccccacctactgcactgtgatcgcctaccccaccgacctgggcacc
atccggctgcggctcatcaacaggttctacagacggctctcggcgttgatttgggatgca
cggtacatcgcacacaacgcccgcaccttcaacgagccgcgaagcaagatcgcccattcc
gctaaactcatcaccaatgtcctccaaaagtttgtcaatgacccaagttgcacagatatc
atggagatttacaatgcagtggaggaaatggatgatgacgatgaggatgatgaagcagag
gcaccaggcacttcgaccggtcataggttgcgtcagcgctcggaggaggtgctgccggac
cgagatgcctggaagggacagtgcaagagtctgatcaactacatcttcgactgtgaggac
tctgagcccttcagacagcccgtcaaccccaacaactatccagactacctggatatcatc
catgcccccatggacttcggcacagtaaagagggtccttgaggacgaccgctacgacaac
cccatcgagctctgcaaggacacgcggctcatctttgccaacgccagagcctacacgccg
aacaagcgatccaagatctacagcatgaccctgcgtctgtcggccttcttcgaggagcgc
atcaggaggatcctttcggagtacaagactgcggtgaagagcagcgagaggctgcgccgc
agccagcgcttcaggaagaagatgcagcagggagagccatcgggcgtcggcgcctcaagc
agtcagaagagggctgccgtgaaaactcaggaaaaagtggagtcgatgtctgtgaccaaa
cctacctcaaccaaagtgtcggctccggagagggcaaggaggcggagccgcaactcgtcc
tcggactccaaagcagcgtcttcgtcaccagcctctgaaagtgagtcagaggaggagaag
cgacctgggtcggccagacgccagagagagaccagggggaaggcgcgcgacagaaggatc
cccaccaggaaaagagttgcagatagcgagagtgaggaagaggaggaggaggaggaagcc
gccttctccagtgaacccgaggagagtgaagatggtgacagggtggcttcgtccaactcc
tcccgtcgccgctatcccagcaggtcgaagaccagcaagagtacacgtttgaccaggacc
agcactgcccccgaccgaagaagaccagcagccaggactcctatgaacggccaggccgcc
aggtcatctcgccgggaaaagtcccgtcggcatgacgacgacagccaagcgtcgtcccag
gatgaggatgaagaggagaaggaggagctgggggatcatgcaggccaccgttttctgaag
agaaagacggcccgtgctgccatcaacaagatgaagctcctggacgcctcagacgaggac
tacgaagaggaggagaaggaggcgaagaaactgaagaagagcagtggtagccgcctgcga
cagaccccccggatcagcaagcgcaccgccgtcatccagagcgactcggactctgaggac
gtatcctctgcacaggcttctcaaaccaaagaggagtcgacggccgactccaaggacgag
gagagcgacgccagcgcgtccccaaaaccccagcagaacggggacgacagtcccagtaaa
cacaaggcaaagaaggaagcatccaggacagaaggaagagaagactcatcccaagtaaac
ggtcacagtgcaaaacctcagaaggccgacagtgattctgaccagcatgatgagggttcc
agtgaggaggaggagtccaaagcagtggcggccttgtctcggacgcattccaaggtcaat
gcagcagcatcagccaggagaagtaaggtcactccggttgcaagcgaggaggacgaggta
gcggatactaagagcaggccggtgcgacgcaggcccgctgtggactctgactctgaagac
gaggactacgttcccgagaagaacccgtttcagcaaaacgggagacgagcggcaagggag
gaccaaggggacaaatccggcgggaaggtcaaagcgcccctaaaacgggacgacgccgag
tccgaggatctcagcgacgctcccaaaggacggagggagcaccggagggaaccggaatca
gaggaggaggaggaggaggacgccgggagcaattactcggatgaaggccgtaaaaagacg
cagaggcacaaaagtaaatccaaacgatcgcgtggcacctcccattcagagagctccgag
caggaatacaaacccaggaaaaggcagaggaggaatcgctctgctggttcctcggacaaa
acttctgacgaagagctggaaaagcggccacgcacccgagccctgcccaaaaagaaaaac
atcagtgaggagtctgcagaagactctgcagaagactttgcctccaaggatcgtgtgaaa
caaagaaacggtaggatcagcgccacctccgctgaagacacacccgtgcgcaagtcctca
aggatctcccccgatgaaattacacggaaggcacgttctaagaggaggcgcacctcggac
acctcggactcggaagacggagacaaagatcagtcggccaagacgaataggaactccaag
gagatcagtgcaaagtcaggctcctcaaagtcctcaaagccacctcaaagggagtctcgt
gggaaacccaaaccggaacccattagcagtcaggaagaggcctcctctcaatcggcttcg
gacgacgagaaggacgcagccgccagccgctcgcggcgagggaagaaggatgtgctgcgg
ccgaaatgcaagcgggaggacggctacagaagcaacagctccgccttggagagcgaggag
cagtcctcctcctcagaacactcggtgagttcagggtcccacggcagcagcagccccaag
aggaagggccacatacgaccggccggaggcagcaagaggatgccgcgccggccgttgagg
gagccaagccgaagggccgccgccaggagggaggcggagagcgatgagtcgtccagcaat
caactgcgacggactaacgtcaccacgcggaaccgcggcaggcagatggtcacctacaac
gacagcgagtga

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