KEGG   Gemmata massiliana: SOIL9_34260
Entry
SOIL9_34260       CDS       T06634                                 
Name
(GenBank) dead deah box helicase : DEAD/DEAH box helicase domain protein OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_1620 PE=3 SV=1: DEAD: Helicase_C
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
gms  Gemmata massiliana
Pathway
gms03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gms00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SOIL9_34260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gms03019]
    SOIL9_34260
   03009 Ribosome biogenesis [BR:gms03009]
    SOIL9_34260
Enzymes [BR:gms01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     SOIL9_34260
Messenger RNA biogenesis [BR:gms03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SOIL9_34260
Ribosome biogenesis [BR:gms03009]
 Prokaryotic type
  rRNA helicases
   SOIL9_34260
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-ProteinID: VTR94288
UniProt: A0A6P2CYS6
LinkDB
Position
1:4185997..4187553
AA seq 518 aa
MIPPTDGDDWTVPESEQTHVPDEEPTSDESVDAPLLDETATADDDFDDETDDSETDPASD
PDHESAPPPETDPAMIFADLQLMRPLMDAINAAGYKHPTPIQEAVIPPALRGKDVIGQAQ
TGTGKTAAFLIPFLNRWRPHKLKGPIGVVMTPTRELALQIANEAEKLAPSSQFRCVPVYG
GTGMQRQLTGLTRGCDLVVGTPGRMLDHLQRGSMSLAQVRYAVLDEADRMLDIGFRDDIE
RILKRCPTERQTLLMSATVPDSIKRLVNRYMKDPVHLHMTPNTPTVDKIRQSYFTVDADR
KFELLKRVIEREKPRQCLIFVERKRWADNLYRDLKRAVPKAAVIHGDLPQSQREKIMAAF
RTGEIKYLIATDVMSRGIDVSNLSHVINYDLPMDIENYVHRIGRTGRIGKDGIAISFALP
EQGEQLTNIEMMINRLIESDQIEGFESAAPRAKGPARDVKVIFTGLDSVKPVKPEGEDDG
WGDDAPPPRAPEEGAGASDEAAKKTVFGRRGKRYSQRL
NT seq 1557 nt   +upstreamnt  +downstreamnt
ttgattcccccaactgacggggacgattggaccgttcccgaatccgaacaaactcacgtc
cccgacgaagagccgacttccgacgagtcggttgacgcccctctactcgatgaaaccgcg
actgcggacgatgatttcgacgacgagacggacgattccgaaaccgatcccgcaagcgac
cccgatcacgaatccgccccgccgccggaaaccgatcccgcgatgatcttcgcggatttg
caactgatgcgcccactcatggacgccatcaacgcggccgggtacaagcacccgacgccg
attcaggaggcggtgattccacccgccctgcgcggcaaagacgttatcgggcaggcccaa
acggggaccggcaagacggccgcgttcctgatcccgttcctcaatcgctggcgcccgcac
aaactcaaggggccgatcggtgtcgtgatgacgccgacgcgcgaactcgcgctccagatc
gcgaacgaggccgagaagctcgccccgagcagccagttccggtgcgtgcccgtgtacggc
ggcaccgggatgcagcggcaactgacgggactgactcgcgggtgcgacctggtggtcgga
acaccgggccggatgctcgaccacctgcaacgcggctcgatgtcgctggcacaggtgcgc
tacgcggtgctcgacgaagcggaccggatgctcgacatcgggttccgcgacgacatcgag
cgcatcctgaagcggtgcccgaccgagcgccagacgctactcatgtcggcgaccgtgccc
gattcgatcaagcgcctcgtgaaccggtacatgaaagacccggttcacctgcacatgacg
ccgaacacgccgacggtggacaagatccgccagagctacttcacggtggacgcggaccgg
aagttcgagctgttgaagcgcgtcatcgagcgcgaaaaaccgcgccagtgcctcatcttc
gtggagcgcaagcgctgggccgacaacttgtaccgcgacctcaagcgcgcggtgccgaag
gccgcagtgattcacggtgacctgccgcaatcgcagcgcgaaaagatcatggccgcgttc
cgcacgggtgagatcaagtacctgatcgcgaccgacgtgatgagccgcgggatcgacgtc
tcgaacctgtcgcacgtcatcaactacgacctgccgatggacatcgagaactacgtccac
cggatcgggcgcacggggcgcatcggtaaggacggcatcgcgatctcgttcgcgctgccg
gagcagggcgagcaactcaccaacatcgagatgatgattaaccggctcatcgagtcggac
cagatcgagggcttcgagtccgcggcgccgcgggcgaaggggccggcacgcgacgtgaaa
gtgatcttcaccgggttggattccgtgaagcccgtaaagcccgagggcgaagacgacggt
tggggcgacgacgcgcctccgccgcgagcgccggaagagggtgccggtgcgtcggatgag
gccgcgaagaagacggtcttcggtcggcgcggcaagcggtacagtcagcgcctctga

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