Girardinichthys multiradiatus (darkedged splitfin): 124856308
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Entry
124856308 CDS
T08099
Symbol
sema3fa
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa isoform X1
KO
K06840
semaphorin 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
Ig_2
ig
Ig_6
I-set
PSI
V-set
Motif
Other DBs
NCBI-GeneID:
124856308
NCBI-ProteinID:
XP_047202597
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Position
20:complement(20848494..20875035)
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AA seq
699 aa
AA seq
DB search
MDEDHDRMYVGSKDYILSLDLHDINKEPLIIHWPVASQRKTECILSGKDTNGECGNFIRL
IEPWNRTHLYVCGTGAYNPICTYVDRGRRSQEYIFRLEPGKVDSGKGKCPYDPKLNSVSA
LINGELYAGVYVDFMGTDSAIFRTLGKQTAMRTDQYNSRWLNDPTFVHAHLIPDSAEKND
DKLYFFFREKASEVGQSPMTQSRIGRICLNDDGGHCCLVNKWSTFLKARLICSVPGADGI
ETHFDELRDVYIQPTQDTRNPVIYGVFSVSGSVFKGSAVCVYSMADIRMVFNGPFAHKEG
PNYQWVAYTGKIPYPRPGTCPGGTFTPNMKSTKDYPDEVINFMRNHPTMYNAVYPVHKRP
LVVRTNVDYEFTTIAVDQVRAADGSYEVLFLGTDRGTVQKVIVLPRDDLQTEELVLEEVE
VFKVPTPITTMKISSKRQQLYVGSILGVTHLALHRCDVYGEACADCCLARDPYCAWDGKS
CSRYSASQKRRSRRQDVKYGNPIRQCRGYNSNANKNTLETVQYGVEGSTTFLECQARSPH
VSLKWHLQKENSDRRKEIRSEGRILKTDQGLLIRSLQSSDSGIYQCTSTEKNFKHTLVKL
QLVVLSSRTVNNVLVDTGNPALPQIQSSAWTPSVGQYKDLLTILSQPEMGLINQYCKDYW
QHGDDSLGDSKAKSLKELKEQKKPRNRRHHEDQTNPAET
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaccacgaccgaatgtacgtgggcagcaaggactatatcctgtctctggac
ctgcacgacatcaacaaggagccgctcattatccattggcccgttgcatcccagaggaag
actgagtgcatcttgtcggggaaagacacaaatggagagtgtgggaacttcattcgtctg
attgagccgtggaaccggacccacctgtatgtgtgtggaactggagcatataatcctatc
tgcacgtatgtggatcgaggacgcaggtcccaggagtacatcttccgtctggaacctggt
aaagtggactccggaaaaggaaaatgcccctatgatcctaaacttaacagtgtttctgcc
ctgatcaatggagagctctatgcaggagtctatgtggatttcatgggaacagactccgcc
atcttccgtactctggggaagcagacggccatgaggaccgatcagtacaactccagatgg
ttaaatgatccaacttttgtccatgcacacctgatcccagatagtgctgagaagaatgat
gacaagctctacttcttcttccgcgagaaagcctctgaggttggccagagtcccatgacg
cagtccaggatagggcggatttgcctgaacgatgacggtggacactgctgcctggtcaac
aaatggagcacctttctgaaggctcgtctgatctgctctgtgcctggagctgatggcatt
gagacgcactttgatgaactcagggatgtttatatccagccaactcaagacacgaggaac
ccagtcatctatggagtcttctcagtttcaggatctgtgtttaaaggctcggcagtgtgt
gtctactccatggccgacatccgtatggtcttcaatgggccatttgcccacaaagaaggg
cccaactaccagtgggtggcgtacactgggaaaattccctaccctcgacctggaacttgt
cctggaggtactttcactcccaacatgaaatccacaaaggattacccagatgaggttatc
aacttcatgagaaaccaccccaccatgtacaacgctgtttacccggtgcacaagcgcccc
ctggtggtcagaaccaacgtggactacgagttcaccacaattgcagttgaccaagtgaga
gctgctgatgggagctatgaggtgctcttcctgggaacagatcgtgggacggtccagaaa
gtcattgtcttgccaagagatgacttgcagacagaggagctggttctggaggaggttgag
gtgttcaaggttcccaccccaatcaccactatgaagatttcgtctaaacggcaacaattg
tatgtaggatctatcctgggtgtgacccacctggctcttcaccgctgtgacgtgtacggg
gaggcctgcgccgactgctgcctggcccgggacccgtactgtgcctgggacggcaaatcc
tgctccagatactccgcctcacaaaagagacggagccgtcgacaggacgtaaaatacgga
aacccaatccgccagtgcagaggttataactcaaatgcaaataagaatactctggaaaca
gttcagtatggagtggagggcagcacgacattcttggagtgccaagctcgttctcctcat
gtctctctaaagtggcacctgcagaaggaaaacagtgacaggagaaaagagattcgctca
gagggtcgcatcctgaaaaccgatcagggtctcctcatccgctcgctgcagtcctccgac
agcggcatctaccagtgcacgtcgaccgagaagaacttcaaacacaccctggtgaagctg
cagctggtggtcctctccagccgcacagtcaacaacgtgctagtggatacaggcaaccca
gccctcccccaaattcagtccagcgcttggaccccaagtgttgggcagtataaggacctg
ctgaccatcctaagccagccggagatggggctgatcaaccagtactgcaaggactactgg
cagcacggggacgacagccttggggacagcaaagccaaaagcctgaaggagctgaaggag
cagaagaagcctcgcaaccgccggcatcacgaggaccagacgaatccagccgagacatga
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