Girardinichthys multiradiatus (darkedged splitfin): 124858214
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Entry
124858214 CDS
T08099
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124858214 (trpa1b)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124858214 (trpa1b)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
124858214
NCBI-ProteinID:
XP_047206084
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Position
21:22479073..22517436
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AA seq
1117 aa
AA seq
DB search
MNFSRDVARQTSCYTYVIEDEDSALATLNAVELAEKGDLALLENLVRKSPEVLGEKDECG
ASPLHHAAAGGHVTLIQFITSVIDSQELNSRDDQGNVPLHWAVEKNKAESCRVLLDLGAD
PNILNNALLSPLHVAVSLGHNNLVELLLSYSMTDCNLQGDLGNTPLILACSLNNCEALSI
LIKHGAMLCRQNKLGHFAMHAAAFAGAKKAMEVILKAGEENGHNAVSHINYLDKSNSSPL
HLAVRGGNFEAIRLCIATGAKIDQQQNDRCTPLHLACTQGAIEVVKLMLSTVDQVEDVIS
LTDGACQTPLHRATIFDHAELAEYLISLGSDLNSTDCKGNTPLLLATSCGAWKTVALLLS
KGADVNVRDKCGCNFLHLAILQPKGLKNLPEEVLQHNNVKALLNCEDKEGCTPLHYACRL
GIHDSVKNMLGLSGQVGLACKSKDKKSALHFAAQYGRINTCHRLLETITDSRLLNEGDER
GLTPLHLASKGGHTKVVQLLLRKGALFHSDYKGWSCLHHASSEGYTQTMDILLSANPKLL
DKTDEDGNTALHIAARLGHVAAVRLMLVRGAEIVLNKNDTSFLHEALQNGKKDVVNAVID
SERCEEALKLFVPGSSQRCPILDMIEFLPESCKHLLDRCVRESDDDHNSPNYHIEYDFRW
LQTPISAKLIEQGYSSPPLAAVNAMVHYNRIELLNHPVCKKYLAMKWVAYGSKAHLLNMF
LYLLGLLPLTNLIITLRPSVNTTETGELDIIMVPISFTEQSVFLSLCMVMVLITNIYSIG
KEVVQISQQRWSYFRDGSNQIDWASAISSLLFVIPLMVNAEGSWHWQAGAMAVLNSWIGF
LLYLQRFEGVGIYVVMFGEIMKTLLRIVMLFVYLMLAFSLAFHALMLNQKEFNSVPLSVI
QTFVMMVGELNYQNNFLDAYLNNTLPFGFLTYATFVHFVLLMPILLVNLMIGLAVGDIAE
VQRNASLKRIGMQIDLHTSLEDKLPYWIMKRVDKPSVTIYPNRKCSRHFLKQLISGEEER
SEVWTRLQSKSQGCTFVENELKKQKTRMKEMSGILEKQHGLLKLIIQKMEICSEAEECDG
PVTLRGNMWPSLAQSKARGRSTSRWVPLIKAIEAKRK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcagcagagatgtggcgcgccagaccagttgttatacttacgtaatagaggat
gaagattcagccctggcgactctaaatgcagtcgagttggcagagaagggggacctggca
cttctggagaacctggtgaggaagagcccagaggtcctcggtgagaaagatgaatgtgga
gccagtccacttcatcatgctgctgcagggggccacgtcactctcattcaatttatcacc
tctgtcatagattcacaggaactgaacagccgtgatgaccagggcaatgtgcctctgcac
tgggcagtggagaagaacaaagcggagagctgcagggtccttcttgacctaggggccgac
cccaacatcctcaacaatgccctcctgtcccccctgcacgtggcagtcagccttggacac
aacaacctggtagagctgcttttgtcctacagtatgacagactgcaacctacaaggagac
cttggaaacaccccactaatactggcctgctccctcaataactgtgaggctttgagtata
ctgataaagcacggagccatgctctgcagacagaacaagttgggccatttcgccatgcac
gctgctgccttcgcgggagcaaagaaagccatggaagttattctgaaagctggagaagag
aatggccacaatgcagtgtcccacatcaattatttggacaagtccaacagcagccctctc
catctggcagtgcgtggtgggaacttcgaggccatccgtctctgcatcgccactggggcc
aaaatagaccagcaacagaatgatcgctgcacaccacttcatttggcctgcactcaaggc
gctattgaggtggtaaaactgatgctgtccactgtggaccaagtagaagatgtcatcagc
ctgactgatggggcttgccagacccctctgcacagggcaacaatatttgaccatgcagag
ctggcggagtacctaatttctttgggttctgacctgaacagcactgactgcaaaggaaac
acccctttgttgttggcaaccagctgtggagcatggaagactgtagctctgctactgtcc
aaaggggccgatgtgaatgtgagagacaaatgtggctgtaacttccttcacctggccatc
ctgcagcccaagggtctgaaaaatctcccagaagaagtgctacagcataacaatgtgaag
gcgttgctgaactgtgaagataaagagggatgcacaccactgcactatgcctgcagactg
ggtatccatgactcagtgaagaacatgctgggcctctcggggcaagtcggccttgcatgt
aagtccaaagacaagaagtctgctcttcactttgctgcacaatatgggcgcatcaatacc
tgccacaggttactggagaccatcacagactctcgtctgcttaatgaaggtgatgagcgg
ggcctgacgccactccatttggcttcaaaaggtgggcacaccaaggtggtacagctgttg
ctgcgcaaaggagctctctttcacagcgattacaaaggctggagttgtctgcaccatgct
tcttctgaaggatacacacaaaccatggatatcttgctctctgcgaatcccaagttactg
gataaaactgatgaggatgggaacactgcactccatatcgctgcaagattgggacatgtg
gctgcagtcagactgatgcttgtcagaggggctgagatcgtcttaaacaagaatgacact
tcattcctccatgaagcgctgcagaatgggaaaaaagatgtggtcaatgctgtgattgac
agcgaaagatgtgaggaggctttgaaactgtttgtacctggctcctcccagcgatgcccc
attcttgacatgattgagtttctgcctgagtcctgcaagcatctgcttgaccgctgcgtg
agggagtctgacgatgaccacaacagccccaactatcatattgaatatgatttcagatgg
ctccagactcccatttcggcgaagttaattgagcagggctattcttctccaccactagct
gcagtcaatgcaatggtgcactataaccgaattgaactcctcaaccacccagtttgcaaa
aagtatctggcaatgaaatgggttgcctacgggagcaaagctcacttgctcaacatgttt
ctgtacctgttagggctgttgcccttaacaaacctgataataactcttcgaccctccgta
aacaccaccgaaacaggcgagctcgacatcatcatggtccccatttcattcacagagcaa
agtgtgttcctgtccttgtgcatggtgatggtcttgatcacaaatatctattcgatagga
aaagaagtggtgcagatatcacagcagcgctggagttacttcagagatggttctaaccag
attgactgggcttctgccatctcctctcttttattcgtcattcccctcatggtcaatgca
gaaggttcttggcactggcaagcaggtgcaatggcagttttaaactcctggattgggttt
ctcctttatctccagaggtttgagggtgtcggcatctacgttgtgatgtttggggagatc
atgaagacgctgctccgtattgtgatgctgtttgtgtacctgatgttggcgttcagtttg
gcgttccatgctctgatgcttaaccagaaagagtttaacagcgtgccgctctctgtgatt
caaacctttgtgatgatggtcggggaactgaactatcagaacaacttcctggatgcttat
ttgaacaacacgcttccatttggttttttgacatatgccacttttgtgcactttgttctt
ctcatgccaatcctcttggtaaacctgatgattggtttagcagttggagatattgctgaa
gttcaaagaaatgcttctctgaaacgaataggaatgcagattgatcttcacacatccctg
gaagacaagcttccgtactggataatgaagcgagtggacaagccctcagtcaccatctac
cccaatcgcaaatgctccaggcacttccttaaacaattaatctctggtgaggaggaaaga
agtgaagtctggactcgtctgcagtccaaatcacaaggctgcacatttgtagaaaatgag
ctcaaaaagcagaagaccagaatgaaagaaatgtcaggcatactggagaagcagcacggt
ctcctgaagctcatcatccagaagatggaaatctgttctgaggcagaggagtgtgacggt
cctgtgacactcagagggaacatgtggcccagcctggctcaaagcaaagcaagaggccgc
agcacgtcgcgttgggtgccgctgattaaggcaattgaggccaaacgcaaataa
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