Girardinichthys multiradiatus (darkedged splitfin): 124863156
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Entry
124863156 CDS
T08099
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
3.6.4.13
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124863156
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmu04054
]
124863156
Pattern recognition receptors [BR:
gmu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
124863156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
Hydantoinase_B
AAA_22
nSTAND3
AAA_11
Motif
Other DBs
NCBI-GeneID:
124863156
NCBI-ProteinID:
XP_047213375
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Position
X:30713883..30717990
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AA seq
681 aa
AA seq
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MADFELRAYQKEVVERALNRENVIIWLPTGGGKTRAAVYVAKRHLESTANAKVMVLVNKV
HLVDQHYNKEFEPHLGDHYKLMKVSGESEEKDFFGIVVKSNDVIICTAQILYNALINKEE
AKHIELSDITLLIIDECHHTHKESTYNKIMRCYIEKKLKGQRPIPQVLGLTASPGTGGAK
TLEGAVEHVLEICANLDSVIVSTKSYTPELEEKVPRPKKTFDVVEKREEDPFGDHIKWMM
KQIHEYMNLPSEVRLGECGTQEYEADVVILEQRGVRENNRLLAQCALHLREYNDALLIND
TLRMMDAYRSLEEFYNAKLTTAIDGTDYFLVGIFQENQVELKNFATNHRFENPKMAKLES
TLLSQFGPDVNSRGILFSRTRRSTHCLHDWVLKNRTLQNAGIKAAILTGAGNGITYMTQH
EQADTIRNFRKGLLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARARDSQ
YSVVAQKDGREVRRELINEYLEELTGKAIDRVQIMSEHEFRRKINELQTQAIIMSKVLED
RKTEKKNKYTASRIRILCRNCFAQVASGNDFRLLENAHYVNINPDFKNHYKLGGKVALER
HFEDWEPGCTVSCNNGNCNKDWGFEMKYKKVAQLPNLAIKNFALETPDGRVTFKKWKDVP
FMVEEFSFQHYCEANFPDLFD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttgaactgcgtgcctaccaaaaggaagtggttgaaagggcgctgaacaga
gaaaatgtcattatttggctgccaacgggaggtggaaagacccgagctgctgtctatgtg
gccaaaaggcatctggagagcacagcaaatgctaaagtaatggtgctggtgaacaaggtt
caccttgtggaccaacattacaacaaagagtttgagcctcatctgggagatcattataaa
ctcatgaaggtcagtggtgagagtgaggagaaggatttcttcgggatagtggtgaagtcc
aacgatgtgatcatctgcacagcacaaattctgtataacgccctgattaacaaggaagaa
gcaaagcacattgagctctcagacatcactctactgataatcgatgagtgtcatcacacc
cacaaggagtcaacctacaacaaaataatgagatgttacatagagaaaaagttgaaagga
caacgaccaatacctcaggtcctgggtctcactgcgtcacctggtacaggaggtgcaaag
accctggaaggtgctgtggagcatgtgctggagatctgtgctaatttagattcagttatt
gtctcaactaaaagctacactcctgagctggaggagaaggtaccccggcccaaaaagacc
tttgacgttgtggagaaaagagaggaggacccatttggggatcatataaagtggatgatg
aagcagatccatgaatacatgaaccttccttctgaagtgagactcggagaatgtggcaca
caagaatatgaggcagatgtggtgattctggagcagcgaggtgttagggagaacaacaga
ctcttggcacaatgtgcactccatctcagagagtataatgatgccctgctcatcaatgac
actctgcgaatgatggatgcgtatcgctccctggaggaattctacaacgcaaagttaacc
acggccattgatggaacagactacttcctggtggggatttttcaagagaatcaggtggag
ctgaagaattttgccacaaatcatcgctttgagaacccgaaaatggcaaaacttgagagc
actctgctaagccagtttggtccagatgtcaattctcgaggaattctcttctccagaacc
cgcaggagcacccactgccttcatgactgggtccttaagaacagaaccttgcagaacgct
gggataaaggctgctatcctcacaggggctggtaatggcatcacctatatgacacagcac
gaacaggcagacacaatccgcaacttccgaaaaggtttgctgaacctcttgatctccacc
agcgtggctgaggaaggcctcgacatccctgagtgcaacctggtggtacgctatggactc
cttacaaatgagattgcacagcagcaggccagtggacgtgcccgagcaagggacagccag
tattcagtggttgcccaaaaagacggacgggaggtccgccgagagcttatcaatgaatac
ctggaggagctgactggaaaagccattgacagggtccagattatgagtgagcatgagttt
cgcagaaagataaatgagcttcaaacacaggccatcattatgagtaaagttttagaggat
cgtaaaacagagaagaaaaataaatatactgcttctagaatcaggatcctgtgcagaaac
tgttttgcacaagtggcatctgggaatgacttcagacttcttgaaaacgctcactatgtc
aacataaatccagactttaaaaatcactacaaactgggtggaaaggtggcgctagagaga
cattttgaggactgggagccaggatgcacagtcagctgtaacaatggcaattgcaacaag
gattggggatttgaaatgaaatacaagaaggtggcccaactgccaaatctagccatcaag
aacttcgccctggagacgcccgatggaagggtcacatttaagaagtggaaggatgttcct
ttcatggtcgaggagtttagctttcaacactactgtgaggcgaacttcccagacttgttt
gattaa
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