Girardinichthys multiradiatus (darkedged splitfin): 124865833
Help
Entry
124865833 CDS
T08099
Symbol
arnt
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124865833 (arnt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124865833 (arnt)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124865833 (arnt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_11
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_2
Motif
Other DBs
NCBI-GeneID:
124865833
NCBI-ProteinID:
XP_047217256
LinkDB
All DBs
Position
3:29142381..29160282
Genome browser
AA seq
789 aa
AA seq
DB search
MLFNADMSSSNPDLTDHSLGIGASGTQNGGAGAPKGTNKRRATQDFDEDEGNKMMRFDDE
TGGSNNEKERFARFLEEDQSFADKEKLARENHSEIERRRRNKMSAYIGELSDMVPSCSAL
ARKPDKLTILRMAVSHMKSLRGNANTNADGSYKPSFLTDQELKHLILEAADGFLFVVSCE
TGRIVYVSDSVTPVLNQSQSEWLGASLYDQLHPDDTEKLREQLSTSENNNTGRMLDLKTG
TVKKEGQQSSARMTMGARRSFICRMRCGTCPVEPMSMNRLGFLRSRNRNGLGTPKEGEPQ
YVVVHCTGYIKSWPPAGVSLTDDEADNNQGSRSCLVAIGRLQVTCCPGDTDLNSISIPVE
FISRHNCQGMFTFVDHRCLASTGYQPQELLGKNILDFSHPEDQGLLRDSFDQVVKLKGQV
LSVMFRFRAKTREWVLMRTSSFTFQNPFSEEIEYIICTNVNVNRNSTQDPLTPISSPGAP
MPLGQSSPKGHPVVLSPGPMATRQLQQQQQQTDLEGGGTRDGMYKQTGPSTLPPQMPVQP
VTAAGPDLKSIEKPELYPPVFQGPDQTKVMPANSAPSSQIYTNNFSAGRSTDSYRPVGMP
PQMTQPAHSATQMLPHMSHQNGAPQSVTPSSTNSPLHGGPPGEWPGPGPAARPQFNNQVA
TQAAKTMSQHFTPMGGFGGGSSNAFSQMPTGAAPTPTNGTNYPQMNSRASLNNNGYDGSQ
SGAQFPSRAAEAVWPQWQGQQHAQSNAEQHPNAQGNQQDMFPDVLSLLDQPANFSSDDFD
IPIYPPYND
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcaacgcggatatgtcctcttcaaatccagacttaacagaccacagtctgggt
ataggagcaagtgggacccagaacggcggggctggtgcaccgaaaggaaccaacaaaaga
cgggccacgcaagactttgatgaagatgaaggaaacaagatgatgagatttgatgatgaa
acaggaggctccaacaatgaaaaagagcgctttgccaggtttctggaagaagatcagagt
tttgcagataaggaaaaactagccagggagaatcacagtgagattgagaggcgcaggcgg
aacaagatgtctgcctacatcggcgaactgtcggacatggtgccctcatgcagcgcgctg
gctcggaaaccagacaagctaaccatcctgcgaatggcggtctcccacatgaagtctctc
agaggaaatgccaatactaatgcggatgggtcgtacaaaccttcgtttctcactgatcag
gaactaaagcacctcatcctggaagcagcagacggcttcctgttcgtggtgtcatgcgag
acgggccgcatcgtttacgtctcggactcggtcacacctgttctcaaccagtcgcagtcc
gaatggctgggcgcctctctctacgatcagctccacccagacgacacagaaaagctaagg
gagcagctctccacctcagagaacaacaacacagggaggatgttggatctgaagacggga
actgtgaaaaaggagggtcagcagtcatcagctagaatgactatgggagcacgtcgatcg
tttatctgtagaatgaggtgtggcacatgcccagtggaaccaatgtccatgaacagactc
ggctttctcaggagtagaaacaggaatggtttaggaacgcccaaggaaggggagccccag
tatgttgtggtccattgtacaggatacatcaaatcctggccgcctgcaggtgtatcgtta
acagatgatgaagcagacaacaatcaagggagtcgctcctgtctagttgccattggtaga
ttacaggttacttgttgccctggtgacacagacctcaacagtatcagcattccagtagag
ttcatctcccgccacaactgccagggcatgttcaccttcgtagaccaccgctgcttggcc
tctactggctaccagccccaggaattactggggaagaatattctagatttttctcaccct
gaagaccaggggttgctgagagacagcttcgaccaggtggttaagctgaaaggccaggtt
ctttcggtcatgtttcggttccgtgccaaaacaagagaatgggtgctgatgagaacgagc
tcctttactttccagaaccccttctcagaggagatcgagtacatcatctgtaccaatgtc
aatgtcaatagaaactcaacccaggaccccctcactcccatctcctcccccggggctcct
atgcccctgggtcagagcagcccaaaaggccatcccgttgttctcagtccaggcccgatg
gccaccagacagttacaacagcagcagcagcagactgacctggagggagggggaacgaga
gatgggatgtacaagcagacaggaccaagcactctcccaccacagatgcccgtgcagcca
gtgacagcggcgggaccggacctcaaaagcatagagaagccagagctctatcctcccgtc
ttccaagggccagatcagaccaaggtcatgccagccaactctgcgccttcctctcagatt
tacaccaacaacttttctgctggtcgttccactgattcatacagaccagtcggcatgcct
ccacagatgacacagccagcgcactcagcaacacagatgctgcctcacatgtctcatcag
aatggagctccgcagtcagttaccccatcaagcactaacagccccctccatggaggacca
ccaggagagtggcccgggcctggacctgcagccagaccacagtttaataaccaggttgct
acccaggcagcaaagaccatgtctcaacactttactccaatgggaggattcggaggcggc
tcttctaacgccttcagccagatgcctacaggcgctgctcccacgcccaccaacggcaca
aactaccctcagatgaattctcgtgccagcctcaacaacaacggctatgatggttcccag
tctggagcccagttcccatctcgtgcagcagaggcggtgtggcctcagtggcagggacaa
cagcatgctcagagcaatgcagagcagcatcccaacgctcagggcaaccagcaggacatg
tttcctgatgtgttgtctctgctagaccagcctgccaacttcagcagtgacgactttgat
attcccatctacccgccgtataacgactga
DBGET
integrated database retrieval system
