Girardinichthys multiradiatus (darkedged splitfin): 124868854
Help
Entry
124868854 CDS
T08099
Symbol
cacna1ab
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010
MAPK signaling pathway
gmu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124868854 (cacna1ab)
04020 Calcium signaling pathway
124868854 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124868854 (cacna1ab)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124868854 (cacna1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124868854
NCBI-ProteinID:
XP_047222436
LinkDB
All DBs
Position
5:35990166..36170017
Genome browser
AA seq
2432 aa
AA seq
DB search
MARFGDELPNRYGGGGGGGGGGGGGAGGQGGPGRGGSRQGGPPGAQRMYKQSMAQRARTM
ALYNPIPVRQSCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEWMILTTIIANCIVLALEQ
HLPDGDKTPLSERLEETEPYFIAIFCFESGIKILALGFALHKGSYLRNGWNVMDFVVVLT
GILSSVGSQLDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILM
FAIIGLEFYMGKFHTTCYDDITKETVEERPCGNKTPSRLCPNGSTCSPGWIGPNYGITQF
DNILFAVLTVFQCITMEGWTDMLYYSNDVEGSMWNWMYYIPLIIIGSFFMLNLVLGVLSG
EFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEEDATGNFDGSRRRPT
IKTRNNKTELLNQEEGEDNIGDAVGFARSSIKSTKEGTNYSKKERRLRFFIRKIVKTQAF
YWTVLCLVGLNTICVAVVHYNQSELLSDFLFYAEFIFLGLFMSEMLIKMYGLGIQPYFHS
SFNCFDCVVIVGSIFEVVWATIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLN
SMKSIVSLLFLLFLFIVVFALLGMQLFGGQFNFESGTPPTNFDTFAAAIMTVFQILTGED
WNMVMYDGIESQGGVNDKGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEE
EQEVAANQKTALQKAKEVAEVSPLSAANLSIAAKEQQKNHNKANKSVWEQRTSEIRRQNL
MTSREVLYNELEQDDWKVEGEGEVSYPQKARGDMKTHLDRPLVVNPQDNRNNNTNKTQPG
ELPLDQQYRRQDIDHRRRATHHCHYRHHQHQKPTNPVSVDTSQLMETNIGHGFSCTSLGN
IEGNMERHQDEEKHSHRSHRGHRHRNRECREARSISPHHSEGADGNGEARRCRQYRRTAK
EGDEGRRHQCRATEGDGEKSEEEGGQKTRRHWHCNQERCRGHRVRKEHHSTCPSLSTTRP
IQQYNEDLDNFRNNSKLASAHEHPYDLPPDHPDHPDHLNNLLNCHDADTHTLLHSMDSLI
LTSMAKPDYTTIDMPPVYPYPSTNAILQVNKNANTDQKKSEEKKEEEDEGEDEDGPKRMP
PYSSCFIMSTTNPFRKCCHYILTLKYFEFSILSVIAMSSIALAAEDPVKPDSPRNNVLRY
FDYVFTGVFTFEMLIKMVVLGLFLHQGSYFRDLWNILDFIVVSGALVAFAFTGSSKGKDI
STIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLF
KGRFFYCTDESKEFERDCRGEYLVYEKEEVKAEKREWKKYDFHYDNVAWALLTLFTVSTG
EGWPQVLKHSVDSTYEDQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGD
KMMEDYSLEKNERACIDFAINAKPLTRHMPKNKLSFQYRMWHFVVSPPFEYSIMALIALN
TIVLMMKFEGASKSYDNVLKYLNIVFTTFFFMESILKIIAFGPLNYFRDAWNVFDFVSVI
GSITDILVTEFGDNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLI
AMLFFIYAIIGMQLFGNIALDEEEESAIDEHNNFRTFIMALMLLFRSATGEAWHEIMLAC
LGEKKCDPDSGNTGKECGSTFAYTYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLPV
ADDNTVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKTLDLLVTP
HKAATDLTVGKIYAAMMIMEYYRQSKTKKLQALQEEQCSSLPNRTPLMFQRMEPPSEGGG
TDGQGGQGQNGLPSTQPNNINSIPPEGGLTESQSWMTAKAQEMFHKTGNWSPDQPYPDDI
HANRHNPQTVEMREMGRDGYSNTEPCHPMDGHGRTLSMPRLSADNQRRRHRPRGNNLSTI
TDNSPMRRSTSSLVHGRSGRGVRLDDYSLERVVSEEGRHGGGRRHRDRSHRTSQRSLTRY
TDADTGIISISCLGLGTDLSTTTQSGDLPPKDRERDRGRTKDRRHHHHHHRHHSSIDKER
FDHHDYPHRQPHDRHWSRSPSEGADGRSHKQGSSSVSGSPVPSTSGTSTPRRGRRQLPQT
PAVPRPHVTYSPAVRKPLYGPPGQGRLRSPSPRHFSPPDHDRGYHHRPPSRHASPHHGGS
SSRHGSPRSPRHQSPHSPLHGSPRSPHRNRWSGPPPGDSLEGDGPFYERDYEYERHHEPP
AYEQSLSHGNPQPHSGNPHPHPRSPRTAHHGPPLAPHPHPRRVPNGYRSSSPSPHRRGPP
GAPHPHHRPPHARGPRKGLHEPYSETDEDDWC
NT seq
7299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctttggagacgagctacccaacaggtacggaggaggaggaggtggtggtggc
ggtggtggcgggggtgccggcggacaaggggggcccggccgtggcggcagcaggcaaggt
gggccccccggggcgcagcggatgtacaagcagtcgatggcccagagagcccggaccatg
gccctgtacaaccccatacccgtccggcagagctgcctaacggtcaaccgctccctcttc
ctcttcagcgaagacaacgtggtgaggaagtatgccaaaaagatcaccgaatggcctcca
tttgaatggatgatcctcaccaccatcatagcaaactgcattgtcctggctctggaacag
caccttcctgatggagacaagacacctttgtccgaaagactggaagagacagagccctac
ttcattgccatattctgttttgagtctggaatcaagatcctggctttgggatttgcatta
cataagggctcctatctaaggaacggctggaacgtcatggactttgtagtagtcctcact
gggattctgtcctctgtggggtcacagctggatctgaggacgcttcgagctgtgagagtg
ctgcggccactaaagttggtgtctggaattcccagcctacaggtggtcctcaagtccata
atgaaggccatgatccccctgcttcagattggtctgctgttgttcgtggctatcctcatg
ttcgccatcatcggcttggagttctacatgggaaaattccacacgacctgctatgatgac
attacaaaagagacagtggaagaacgtccatgtggtaataaaacaccttcccgattgtgc
cctaatggatcaacatgtagtcctggatggattggaccaaactatggcatcacccagttt
gacaacatcctgttcgctgttctcacagtcttccagtgcatcactatggaaggatggaca
gacatgctctactacagcaatgacgtggagggcagcatgtggaactggatgtattacatc
ccccttatcatcatcggctcctttttcatgctcaacctggtgctgggtgtactttcaggg
gaatttgccaaagagagggaacgggtggaaaacaggagtgagttccttaagctgaggcga
cagcagcagattgagagagagctcaatggatacttggagtggatctgcaaagcagaggag
gtgattctggctgaggaagatgctacggggaactttgatggttcgagacgaaggccaacc
atcaaaaccagaaataacaaaacagagcttctaaatcaagaggaaggagaggacaatata
ggagatgcagtaggatttgctcgttccagtataaagagcactaaggaaggcaccaactac
agtaaaaaagagcgacgactgcgattcttcatccggaagatagtgaagacgcaggccttc
tattggacagttctctgcctggtgggcctcaacaccatctgtgtggccgtggtgcattac
aaccagtcagagcttctttctgactttctcttctatgcagagttcatcttcctcggtttg
ttcatgtctgagatgctgatcaagatgtatggtctgggcatccagccctacttccactct
tcatttaactgcttcgactgtgtggttattgttggcagcatctttgaggttgtgtgggcc
accataaaaccaggcacatcattcggcatcagcgtgttacgagctctcaggctgttgcgc
attttcaaagtcaccaagtactgggcaccacttagaaacctggtggtttctctgttgaac
tccatgaagtccattgtcagcttgctcttcctccttttcctctttattgtggtctttgct
ttgttggggatgcagctttttggaggacaattcaactttgaaagtggaactccacctacc
aattttgatacttttgcagcagcaatcatgacagtgtttcagatcctgacaggagaggac
tggaatatggtgatgtatgatggcattgagtcacaaggaggagtaaatgacaaaggaatg
gtcttctccatcttcttcatcgtcctcacactctttggcaactacacactgctgaatgtc
ttcttggctatcgctgttgacaatctggccaatgcccaggaactcaccaaggatgaagaa
gaacaggaagtggcagctaaccaaaagacagcactacagaaggctaaggaagtggcagag
gtcagcccactatctgctgcaaacctgtcaattgctgcgaaggagcagcagaagaaccac
aacaaggccaacaagtctgtgtgggagcagagaaccagtgagattcggcgacaaaacctg
atgacgagccgcgaggtgctgtacaatgagctggaacaggatgactggaaggttgaagga
gaaggagaggtttcatacccacagaaagcacgtggtgatatgaaaacacacctggacaga
cctttggtggtaaacccacaggacaatcgcaacaacaacaccaacaagacccaacctggt
gagctgccactggatcagcagtatcgacggcaggatattgatcaccgccgtcgtgctacc
caccactgccactaccgccaccatcaacatcagaaacccactaacccagtcagtgtagat
acaagccagcttatggaaaccaacatagggcatggtttcagctgcacatctctgggtaac
atagaaggaaacatggaacgccaccaagacgaggagaaacacagccaccggagtcatcga
ggccatcgacacaggaacagagagtgcagggaggctcgcagcatttctccccatcatagt
gaaggtgcagatggcaatggtgaggcaaggaggtgccgacagtaccgcaggacagccaag
gagggggacgagggcagaagacatcaatgtagggcaacagagggagatggagagaaaagt
gaggaagagggtggacagaagacaagacgacattggcattgcaaccaggaaagatgcaga
ggacatcgtgtcagaaaagaacaccacagcacctgtcccagcctctcaactacacgaccc
atacagcagtataacgaggaccttgacaacttccgcaacaacagcaagctggccagtgcc
catgagcacccttatgatctcccacccgatcacccagatcatccagaccacctcaacaac
ctgctgaactgccatgatgcagacacccacaccttgcttcatagcatggacagtctcatc
ttgaccagcatggcaaagcctgactacaccacgatagacatgccccctgtgtacccctat
ccctcgaccaatgccatcttacaagtgaacaagaatgccaacactgaccagaagaaaagc
gaggagaagaaggaagaggaggatgagggtgaagatgaagatggccctaagcgcatgcct
ccctatagttcctgcttcataatgtctacgaccaacccgtttcggaagtgctgtcactac
atccttactctgaagtactttgagttcagcatcctgtctgtcatcgctatgagcagcatc
gcccttgcagcagaggatcctgtcaagcctgactcaccacgaaacaatgtgctgcggtat
tttgactacgttttcacaggggtcttcacatttgaaatgttgatcaagatggttgtgctg
ggcttgtttctccaccaagggtcttacttccgtgacttgtggaacattctggactttata
gtggttagtggtgctctggtggccttcgccttcacggggagcagcaaaggtaaagacatc
agtacaattaaatccctgcgtgtgctgagggtactacgtccacttaagaccatcaagcgc
ctccccaagttaaaggcagtttttgactgtgtggtgaactccctgaagaatgtgttaaat
atcctaatcgtctacatgctcttcatgttcatctttgctgttgtggctgtgcagttgttt
aagggccgcttcttttactgcacagacgaatcaaaagaattcgaacgggactgcaggggc
gaatatttagtttatgaaaaagaagaagtaaaagctgagaagcgggaatggaagaagtac
gattttcactacgacaacgtggcttgggccttgctcaccctcttcaccgtctccaccgga
gaggggtggccacaggtgttaaaacactcagtggactccacttatgaggatcagggccca
agtccgggttacaggatggaaatgtccatcttttacgtggtgtacttcgttgtcttccct
ttcttctttgtcaacatctttgtggctctcatcatcatcaccttccaagagcaaggggat
aagatgatggaagactacagcttggaaaagaacgaaagagcctgtatagattttgccatt
aatgccaagcctctgactcgccacatgccaaagaacaaactgagcttccagtatcgtatg
tggcattttgttgtgtcccctcccttcgagtatagcatcatggctctgattgcactcaac
acaattgtcctgatgatgaagtttgaaggtgcatctaagagttacgataatgtgctaaag
tacctaaacattgtgttcaccaccttcttctttatggaatctatcctgaaaatcattgct
tttggtcctttgaattacttcagagacgcctggaacgtttttgattttgtctcagtcatc
ggaagcattactgacatattggtaacagagtttggggataatttcatcaacttgagcttc
ctgaggcttttcagggcagctcgtctcattaagctcctgagacagggggaaacaatccgg
atcttactatggacttttgtccagtcctttaaggctctgccatatgtgtgcctgctcatt
gccatgctctttttcatctacgccatcattggcatgcagttgtttggaaacatagctcta
gacgaggaggaagaaagtgccatcgatgagcacaacaacttcagaactttcattatggcc
ttaatgctgctattccggagtgctacaggtgaggcatggcatgaaatcatgctggcgtgc
ctgggagagaaaaaatgcgacccagactcaggaaatacagggaaggagtgtggcagcacc
tttgcctacacatactttgtctcctttattttcctctgctccttcctgatgctaaatctc
tttgtggctgtcatcatggacaattttgagtacctgaccagagactcatctattcttggg
ccccaccatttggacgaatatgtaaggatttgggctgaatacgacccagctgcctgtggg
cgcatacattataaggatatgtacagtttattgcgagttatctcccctcctctgggcctt
ggcaagaaatgcccacatagggtggcctgcaagaggctccttcgcatggatctgcccgtt
gctgatgacaacacagttcattttaactccaccctcatggctctgatcaggacagcactg
gatataaagattgccaagggcggtgcagataagcaccagatggatgcagagctgagaaag
gagatgatggctatctggccaaatttatcacagaagactctggacctgctggttactcca
cacaaggcagccacagacttgacggtgggcaaaatctacgctgccatgatgatcatggaa
tactacagacagagcaagaccaaaaagctgcaggccctgcaagaggaacagtgctcctcc
cttcctaaccgaacgccattaatgtttcagcgcatggagccaccctctgagggagggggc
actgacggccagggggggcaaggccagaatggtctccccagcactcagccaaacaacatc
aacagcatacctcctgaaggtggcttgactgaaagccaatcgtggatgacggctaaagca
caggaaatgttccacaagactggtaactggagcccggaccaaccctaccctgacgacatc
catgcgaaccgccacaatccccagactgtagagatgagggagatggggcgggacgggtac
tccaacactgagccctgtcacccaatggatgggcatgggcggaccctctccatgccccgc
ctctcggcagacaaccaacggaggagacacagaccccgtggaaataacctcagtaccatc
actgacaatagtccaatgcgacgctctacctccagtctagtccacgggcgttcaggtcgt
ggagtgaggctggatgattactcgttggagagggtggtctctgaggaggggagacacggc
ggtgggcgcaggcacagggacagaagtcatcgtacttcacagcgatcactgaccagatat
acagacgctgacacaggtatcatatctatttcatgtctaggtctgggcacagacctcagc
accactacacagtcaggggatctgcctcccaaggaccgtgagcgggaccgtgggcgcacc
aaggaccggcgtcatcaccaccaccatcaccgtcatcacagctcaattgacaaggagcgc
tttgaccaccatgactacccacatagacaaccccatgaccgccactggtcccggtcccct
agtgaaggggctgatggaagaagtcacaaacagggcagtagttcggtaagtggcagcccg
gtcccctctacctctgggaccagcactccaaggagaggccgccgccagctaccacagact
cctgctgttccacgtccacacgtcacctactcccctgctgtccgaaagcctctctatggt
ccaccgggtcaaggccgtttgcgctcaccctcccctcgacacttctctccgccggatcac
gacagaggctatcaccaccgacccccatcacgtcacgcctctccacatcacggcggctcc
tcgtccaggcacggttcgccacgctcacctcgacatcagtccccacactcaccactccac
gggtcacctcggtctccacaccgaaaccgctggagtggtcccccaccaggggacagccta
gagggtgatgggcccttctatgagagagattacgagtacgagcggcaccatgagcctccc
gcctatgagcagagcctctcccatggcaaccctcaaccacatagtggaaatcctcaccca
catccacgctcaccaaggactgctcatcatgggccccctctggcccctcacccgcatcca
cgtagggttcccaatggctaccgttcatcctcaccttctccacataggaggggaccacca
ggggcacctcaccctcaccaccggcctccacatgccagagggccccgcaagggcctccat
gaaccttatagtgagacggatgaggatgactggtgctag
DBGET
integrated database retrieval system
