Girardinichthys multiradiatus (darkedged splitfin): 124871341
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Entry
124871341 CDS
T08099
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124871341 (scn1laa)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124871341 (scn1laa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
124871341
NCBI-ProteinID:
XP_047226550
LinkDB
All DBs
Position
7:complement(28407321..28459563)
Genome browser
AA seq
1983 aa
AA seq
DB search
MAEHLVPPGPDSLHPLTLESLKAIEKRIAEKKAKKPNDEEKTCKYEDELKPSRDLEEGKP
LPRFYDIPAGLVSTALEDLDPYYYDKKTFIVINNKKFIYRFNAAPAFYLLTPFHPIRRLS
FKVLVHSYPFINMFSMLIMCTILTNSAFMTLHNQPDWAKHVEYTFTAIYTFEFIIKVLAR
GFCIGKFTFLRDPWNWLDFCVIVLAYVTEFAEMGSLSVLRTFRVLRTLKAISVIPGLKTI
VGALFQSVKKLANVMILTVFCLSVFALVGLQLFMGHLRNKCIVKPDNMSMIFQTEWTNNK
SNYYIQQGKKDPLLCGNSSQAGKCPEGYICLKAGDNPDYGYTSFDTFGWAFLSLFRLMTQ
DYWEYLYQQTLRASGKPYMFFFVLVIFLGSFYLVNLILAVVAMAYEEQCQMNLKKAQEKE
EEYKAAIEQLKRQQEEDVQAMVKAGTIVNGETLEKGGGTESSSEASKLSSKSAKERRNRR
KKRKEEEKGARKTSYSDSIDSLTAARFHFSIDGHPFNYDIKPSTNQSFLSFRGQLLPSRR
NSKTSLFSLQSQPQDVTSENEFADDENSIFEGKLSRRGSLLNTPRYNRHSSSVSQCSFLP
HLQFQPSGIRHSSIDCNGVVSLVEENSLPTSLPAGILPPNLTINMAFNGNNADSTDTESK
LASGENYMDCLDLTNNYEMRQRAYSIASVITNTIEELEESRQKCPPCWYKFAHNFLIWEC
CPVWLKIKQIVKLIVMDPFTDLAITMCIVLNTLFMAMEHHEMEKWFANMLYVGNLVFTAI
FTVEMILKIIALDPYYYFQVGWNIFDAVIVCLSLTELSLSDVKGMSILRSFRLLRVFKLA
KSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKRYIDCVCKINEDCNLP
RWHMSDFFHSFLIVFRVLCGEWIETMWDCMQVAGIPQCLILYMMVMVIGNLVVLNLFLAL
LLSSFSSDNLMKTADDDNELNNLQIAFDRIHRGISFIKLKIGSCCNSLCVRDKKASEDKT
FGHNGVPNHTITDFSKSRNGEVTGVGKSGDKYIVNSKSDDSIMSFINNPSLTVTVPIAAE
ESDFEMLNTEDFSSFSSNVPEFHVAVDDDDDDDDDDDDGEFSASEGSTLDDQSNREPAET
VDHDFEEIKEPHDCFTAGCVRKFKCCQVNVHVGWWKMWWTLRKTCYRIVEHNWFESFIIF
MILLSSGALALEDVYAEQRKTIKVLLEFADKMFTFIFILEMLLKWMAYGFAKYFTNAWCW
LDFLIVDVSLVSLVANALEFSDIGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPS
IFNVLLVCLIFWLIFSIMGVNLFAGKFHSCLNKTTDKPFSTDEVKNKSECIKLGNETAVW
KNIKVNFDNVGMGYLALLEVATFKGWMDIMYAAVDSQTKQDEQPEYEINLKMYLYFVVFI
IFGAFFTLNLFIGVIIDNFNQQKRKLGGQDIFMTDEQKKYYNAMKKLGSKKPQKPIPRPE
NTFQGYIFDFVTQQVFDIIIMILIWLNMVAMMVEHEDQGPKLKNTLRNINIGFIVIFTGE
CLLKMIALRHYFFINGWNIFDFIVVILSVVGTFLANVIEKYFVSPTLFRVIRLARIGRVL
RLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEKGIDDLFNF
ETFGNSMICLFQITTSAGWDSLLAPILNKDKDDCDTEIDNPGSNVKGNCGNPSVGIAFFV
SYIIICFLIVVNMYIAVILENFGVATEESTEPLSEDDFEIFYEVWEKFDPLATQFVKYSM
LSDFADALNPPLRIPKPNKLELISMDLPVVSGDRIHCLDILFAFTKRVLGESGDMDILRA
QMEDRFMAANPSKVSYEPITATFRQKQENVSAAVIQRAFRHYSRTKIFDVVNVDVDKDEK
LSDRKDNFTGKLKEVSTADKAELPPLMDPQSSGNSVTPNGNSKHEKDRSEKEVEGKDITE
QDK
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaccttgtaccaccaggtcctgatagcctccatccactcacccttgagtca
ctcaaagccattgagaaacggatcgctgagaagaaagccaagaagcccaacgatgaagag
aaaacatgcaagtatgaggatgagctcaaaccaagccgtgatctggaggaaggcaagcct
ctcccacgtttttatgacattcctgcaggcctggtgtcgacagcgctggaagacctggat
ccctactactatgataaaaaaacttttatagtaataaacaacaagaagtttatttatcga
ttcaacgctgctcccgccttctaccttctgacccccttccatcctatcagaaggctatca
tttaaagttctggtgcactcatatcctttcattaatatgttcagcatgctgatcatgtgt
actattctcaccaactctgcattcatgactctccataaccaaccagattgggcaaagcac
gtagagtacacatttactgcaatctacacctttgagttcataattaaggttttagcaaga
ggattctgcatagggaagttcacattcttaagagatccctggaactggctggacttctgt
gtcattgtcttagcgtatgtaactgaatttgcagaaatgggaagtctttcagttcttcgc
acatttcgggtgctcagaacattgaaagcgatttcagtaattccaggtctaaagacaatt
gtcggtgcattattccagtcagtaaagaagcttgctaatgttatgatcctgaccgttttt
tgcttgagcgtctttgcacttgttggattacagctgtttatgggacacttgaggaataag
tgcatagtgaagccagataatatgtctatgatatttcagaccgaatggacaaacaacaag
agtaattattatatccagcaaggcaaaaaagatccattgctttgtggaaacagcagtcag
gctgggaaatgtccagagggctatatatgtttaaaagctggagataacccagactacggt
tacacaagttttgatacctttggttgggccttcctttctctatttagactgatgacacag
gattactgggaatacctttatcagcagactttgagagcatctgggaaaccctacatgttt
ttttttgtcctggttatattccttggttccttctacttggtaaacctgattttggccgta
gtagctatggcctatgaggagcagtgccagatgaacctaaagaaagctcaggagaaggag
gaggaatataaagcagccattgaacagctcaaacgtcagcaagaggaggatgttcaggca
atggtaaaagcaggtacaatagtcaatggagagaccttggagaaaggtggtggaacagag
agttcctcggaagcatctaagctgagctccaaaagtgccaaagagcgacgcaacaggaga
aaaaaaagaaaggaggaggaaaaaggagccaggaagacatcttattcagattcaatagac
agcttaacagcagcccgtttccacttctctattgatggacacccattcaactatgacata
aaaccttcaacgaaccagtcctttctgagtttccgtggacagctgctgccatccaggaga
aacagcaaaaccagccttttcagtctccaaagccaaccacaagatgtcacttcggaaaat
gagtttgcagatgatgagaacagcatttttgaaggcaagctgagtcgaaggggatccctg
ttaaacacccctagatataatagacacagcagcagtgtgagccaatgcagcttcttaccg
catctccagtttcaaccctctgggatcaggcacagctctatagactgcaatggtgttgtg
tctctggtggaggagaactcacttccaacatcgctacctgcagggatccttccacctaat
ctgacaataaatatggccttcaatggaaacaatgctgacagcacagacacagaatccaaa
cttgccagcggagaaaactacatggattgtttggacctaaccaacaactacgagatgaga
cagagagcatatagtatagctagtgtcatcacaaacaccatagaggaacttgaagaatca
agacagaagtgccctccttgctggtacaaatttgcccacaacttcctcatctgggagtgt
tgcccagtatggctgaaaatcaaacaaatagttaaattaattgtgatggacccatttacg
gacctagccatcactatgtgcattgtactcaacacattattcatggccatggagcatcat
gaaatggaaaaatggttcgccaacatgctgtatgttggaaatctggtgttcacggccatc
tttacagtagaaatgatcctcaagattattgcactggacccctactattactttcaagtg
ggatggaatatttttgatgcagtcattgtctgtttaagcttgacagagcttagtctcagt
gatgtgaaaggcatgtccattctgagatcattcagattgctgagagtgttcaagttggct
aagtcctggcccactcttaataaactcatcaaaataattggtaattcagtgggagctttg
ggcaacctgaccctggtgctggccatcattgttttcatctttgctgttgtgggcatgcag
ctgtttggaaaacgctatatcgactgtgtgtgtaaaatcaatgaagactgcaatctgcct
cgctggcacatgagtgacttcttccattcattcctcattgtgttccgagtgctttgtgga
gaatggatagagacaatgtgggactgtatgcaggtggctgggataccccagtgcctcatt
ctctacatgatggtcatggttattggaaatcttgtggtgctgaacttgtttctggccctg
ctgctgagttcattcagttcagacaatctgatgaagactgcagatgacgataacgagctc
aacaatttgcagattgcatttgatcggatacacagaggcatttccttcatcaagttgaag
attggaagttgttgcaacagtttgtgtgtcagagataaaaaagcgagtgaagacaaaaca
tttgggcacaatggtgtccccaatcataccattacagacttctctaagagtcgcaatggc
gaagtgactggagtgggcaaaagtggggacaagtacatagtcaacagcaagagcgatgat
tccatcatgtctttcataaataacccaagtctgactgtgactgttcccattgctgcggag
gagtcagactttgaaatgcttaatactgaggacttcagcagtttttcatccaacgtaccg
gaatttcatgtggctgtcgatgatgatgatgatgatgatgatgatgatgatgatggagag
ttcagtgcctctgagggcagtacattggatgatcagtcaaacagagagccagctgagact
gtagaccatgattttgaagaaattaaggaaccacatgactgttttactgcaggatgcgtg
cggaaatttaaatgttgccaagtaaatgtgcacgtgggctggtggaagatgtggtggaca
ctaaggaaaacctgttatcggatagtcgagcacaactggtttgagagcttcatcatcttc
atgattttgctcagcagtggagcacttgctttggaagatgtgtacgctgagcagagaaaa
acaattaaagtattgttggaatttgcagacaaaatgtttaccttcatcttcattctggag
atgctgctgaaatggatggcatatggatttgccaagtatttcacaaacgcatggtgctgg
ttggacttcctcattgttgacgtctcactggtcagtcttgtggctaatgctttagaattc
tcagacattggtccaatcaaatctctgagaaccctgcgagctctaaggcctctaagagcc
ctgtcaaggtttgagggcatgagggtggttgtcaatgccctactgggagccattccttcc
atctttaatgtgctgttggtatgcctcatcttctggctaatcttcagcatcatgggagtc
aacctatttgcaggaaagttccacagctgtttaaataaaaccacagacaaacctttcagc
acagatgaagtgaaaaacaagtcagaatgcataaagcttgggaatgagactgccgtctgg
aaaaatatcaaagtcaactttgacaatgttggaatgggctatcttgctcttctggaagtt
gctacattcaaaggctggatggatatcatgtatgctgctgtggactctcaaaccaagcaa
gatgaacagccagaatatgaaatcaacttgaagatgtacctatattttgttgttttcatc
atatttggggcctttttcaccctgaatctcttcattggtgtcattatagacaatttcaat
caacagaagagaaagttaggaggtcaagacatctttatgactgatgagcaaaagaaatac
tataatgctatgaagaagctggggtcaaagaagccacagaaaccaatcccaaggccagaa
aacacgtttcaaggatacatttttgattttgttacacaacaagtgtttgatattataatt
atgattcttatatggctaaatatggtagccatgatggtggaacatgaggaccagggccca
aaactgaaaaataccctcaggaacatcaacatagggttcattgtcatcttcactggagaa
tgtttgttaaagatgatcgcacttcgccattactttttcatcaatggttggaatatattt
gatttcattgtggtcatcctatcagttgttggcacatttcttgcaaatgtgatagagaag
tattttgtctcaccaacccttttcagagtgatccgactggctaggatcggacgtgtcctt
cgccttattaaaagtgccaagggaattcgtacactcttgtttgccttgatgatgtcactt
cctgccttgtttaacattggccttttgctcttcttggtgatgttcatctacgccatcttt
ggcatgtcaaactttgcctacgttaaaaaggaaaaaggcattgatgacctttttaatttt
gagacttttggcaacagcatgatctgtttgtttcagattaccacatccgcagggtgggat
agccttctagcacccatcctcaacaaggacaaagatgattgtgatactgaaattgacaat
cctggtagcaatgttaaaggaaattgtggaaatccttcagtgggaattgccttctttgtg
agttatataattatctgcttccttattgtcgtgaacatgtacattgcagtcatcctggag
aattttggcgtggccaccgaggagagcactgaaccattaagcgaggatgattttgaaata
ttttatgaggtctgggaaaagtttgaccctctcgcaacacagtttgtgaaatacagtatg
ctgtcagactttgcagatgctttaaacccaccattacgcattcccaagcctaacaaactg
gagctcatctctatggatctaccagttgtcagtggtgaccgcattcactgcctggatata
ctttttgcctttacaaaacgtgttttgggtgagagtggggacatggacattctcagggcc
cagatggaggatcgctttatggctgcaaatccatccaaggtgtcatatgaacccatcaca
gccaccttccgccaaaaacaggaaaacgtgtcagctgctgttattcagagagcttttaga
cattattctaggaccaagatttttgatgtagtcaatgttgatgttgacaaggatgaaaag
ctgtctgacagaaaagataattttacaggaaaacttaaagaagtatctactgccgataaa
gctgaactgccacctttaatggaccctcagtcttcaggtaacagtgtgacaccaaatggg
aacagcaaacacgaaaaggacagaagtgaaaaggaggttgagggcaaagacatcacagaa
caagacaaatga
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