Girardinichthys multiradiatus (darkedged splitfin): 124872646
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Entry
124872646 CDS
T08099
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03420
Nucleotide excision repair
gmu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124872646 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
124872646 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gmu03051
]
124872646 (rad23b)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124872646 (rad23b)
Proteasome [BR:
gmu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
124872646 (rad23b)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
124872646 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
Crinkler
Rad60-SLD_2
Dsc3_N
Ubiquitin_5
Metal_resist
OTU1_UBXL
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
124872646
NCBI-ProteinID:
XP_047228836
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Position
8:complement(20058791..20066964)
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AA seq
384 aa
AA seq
DB search
MLITLKTLQQQTFKIDIDEEETVKTLKEKIEEEKGKEIFSVAGQKLIYAGKILSDDTPLK
EYNIDEKNFVVVMVTKVKTASATTQTSSPSSASSTTAPAASSSSEKLAEPVSTDNKPEAK
PEEKPALTAEPSSTTSGSSGSSETSTSSNLITEAVSTLVTGSSYDAMVNEMMLLGYGREE
VVAALRVSFNNPDRAMEYLLSGMPTRDQGPAAGPDATTPPASGAPAAPSGVVGTPANTGS
SPTATAGANPLSFLRSQPQFQVMRQLIQQNPALLPTLLQEIGRENPELLQEISSHQEQFI
QMLNEPNPDPVPAGGGGVAGGMGGGTPGGGQTSYIQVTPQEKEAIERLKALGFPEGLVIQ
AYFACDKNENLAANFLLQQNFDDD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctgataactctgaaaacgttacagcagcagacctttaaaattgacatcgatgaggag
gagacggtgaaaacgttaaaagagaagattgaagaggagaaggggaaggaaattttttct
gttgcaggacagaagctgatctatgctggtaaaatcttaagcgatgacacgcctctcaaa
gaatacaacattgatgagaagaactttgtggtggtcatggtgacaaaggtcaaaacggcc
tcagccaccacacaaacttcatcgccttcttcagcttccagcaccacagctcctgcagcc
tcgtccagttcagagaagctggcagagccggtgtccactgacaacaagccagaggccaaa
ccagaggaaaaacctgctctgactgctgaaccatcctccaccactagtggcagtagcgga
agctctgagacttcaacaagctcaaacctgatcactgaagctgtttcaactcttgtgaca
ggttcatcatatgatgcaatggtgaatgagatgatgctcctgggctatgggagagaagaa
gtggtggcagctctgagagtgagcttcaacaacccagacagagctatggaatacctgctt
tctggtatgccaaccagagatcagggtcctgcagcaggacctgacgccacaacgcctcca
gcgagtggcgctccagctgctccttctggagttgttggcactcctgccaacactggatct
tcaccaactgctacagcaggagccaatcccttgagcttcctaagaagtcagcctcagttc
caggtgatgcggcagctgattcagcagaaccctgctctgctaccaacgttgttgcaggag
atcggcagggagaacccagaactgctgcaggagatcagcagccaccaagaacagttcatc
cagatgctgaatgagcccaatccagacccagtgccagcaggtggcggaggggtagctgga
gggatgggaggtggaacacctggcgggggtcagacgagctatattcaggtcacaccacag
gaaaaagaagctattgagaggctaaaagccttggggtttccagaaggactcgtcatccaa
gcctactttgcttgcgacaagaacgagaacttggctgccaacttccttttacaacagaac
tttgacgacgactaa
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