Girardinichthys multiradiatus (darkedged splitfin): 124875064
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Entry
124875064 CDS
T08099
Symbol
si:ch211-141o9.10
Name
(RefSeq) probable endonuclease 4 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124875064 (si:ch211-141o9.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124875064 (si:ch211-141o9.10)
Enzymes [BR:
gmu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124875064 (si:ch211-141o9.10)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124875064 (si:ch211-141o9.10)
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GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
124875064
NCBI-ProteinID:
XP_047232818
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All DBs
Position
10:1828002..1844080
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AA seq
330 aa
AA seq
DB search
MGPRKGAARKRRHEDGALGDESEAQKTGEKKIGEERGGMRRRISGSNKYIGAHVGIQGGI
WKAVETSVEMGGTSFALFLGSQRSWKRPALDQKTAEKFQEQCSLHGFDPAHILPHGSYLM
NCGSPKDDVFEKSQALLVDELSRCSLLGLSLYNFHPGSSLGTITTEQCVDKIAGAINHAH
QQTPAVVTVLENMSGQGSTVGGKFFELKSIIDKVRDQRRVGVCLDTCHAFAAGYDLAAEG
GVTAMLDQFDQEVGLRHLKAVHLNDSKGKLGCNLDRHEDIGKGNIGISAFRDIVNEPRLD
NIPLILETPGRPGFEYAEQIELLYSLCEKK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgaggaagggggcagcgaggaagaggagacatgaagatggggctttgggagat
gaatcagaggctcagaagactggggagaagaagattggtgaggagaggggagggatgcga
aggaggatcagtggaagcaacaaatacattggagcccatgttggaattcaaggtggaata
tggaaagctgtagagaccagtgtagagatgggaggcaccagttttgcactgtttctgggc
tctcagcggtcctggaagaggcctgcactggaccagaaaactgcagaaaagtttcaggag
caatgttccctacatggttttgacccagctcacatcctgcctcatggttcctacctgatg
aactgtggatctcccaaagatgatgtatttgagaagagccaggccctgctggtggacgag
ctcagccgctgcagcctcctgggcctgagcctctacaactttcaccctggctcctccctg
ggtaccatcaccactgagcaatgtgtggacaagatagcaggagctattaaccacgctcac
cagcaaacacctgctgtggtcacagtgttggagaacatgagcggccagggcagcacagtg
ggcggaaagttcttcgagcttaagagcattatagacaaggtgagagaccagaggagagtg
ggagtgtgtctggatacctgtcatgcctttgcagcgggttatgacctggctgcagaagga
ggagtgacggccatgcttgatcagtttgatcaggaagttgggcttcgccatctgaaagcg
gttcatctcaacgattctaaaggtaagcttggctgtaaccttgaccgacatgaagatatt
ggtaaaggcaacattggaatctcagcgtttcgagacatcgtgaatgagccgagactggac
aacatccctctgatactggagacgcccggacggcctggattcgaatatgctgagcaaata
gagcttctttattccctgtgtgagaaaaaataa
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