Girardinichthys multiradiatus (darkedged splitfin): 124877654
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Entry
124877654 CDS
T08099
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124877654 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124877654 (ttc37)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
124877654 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_19
TPR_16
TPR_17
TPR_11
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_7
ANAPC3
TPR_9
PknG_TPR
ARM_TT21_N
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
124877654
NCBI-ProteinID:
XP_047236985
LinkDB
All DBs
Position
12:complement(37952492..37974418)
Genome browser
AA seq
1571 aa
AA seq
DB search
MSNKEVKTALKSAREAINNKEFKEVLKHCKTVLKLEKNNYNAWVFIGKAASELEQPDQSQ
AAYKKAVELEPDQLLAWQGLANLYENTDQWDFKDELPNVYQKLVELYARTDKNKSYDMIK
KLSDIYQSDRDYLKLAKVCLQLIQLKEDEGVDKKELVQLLQNMTQFLSDGISNEEQDNET
QQHLITAFEKAMILIEPVPGEEHKKLSTGYIKCLSKLPHEEGKMKEACQSMLSVYPRQTY
PLEVLSSHYLKTNNMDEDAVSCFSRLLELVPNNGLGHLGLGTKALLEGRYKEAVDELAKG
IETMSSATGWYSLAEAQFKIHRYSDSAASCTQGLNVCMSDDKKQKDKLLRLKLEALVRSE
GEQGADQALETFSQITQAEKDPVLLALKGRAYLNKGQIDQSLKLLSELEGSNPNLSQGMT
LRGLAHLAEGQLQLAEQSFLQATKQTPDSGEYFFFLGKLYWDMGSETRKDRSKAHTYLLK
AAKLDPHLGCAFRYLGHYYREVANDNARAQGCYRKAFQLNSDDAESGAAWVDLSMGQGDM
DSALATLESVIEKATPGSAKWAQMRRGLYYLKVGEHQPAITDLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFDKAHQLQPSSIYSVYRAAAIKQTLGKFKEAVDEYLQITTQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQEAIHNLFRAVQLRPDLSCLWKLLGDACT
AVRVVSPSRARVVVPTLLTGFDCTIKDRMLNQAQTLKAGARCYAHALKLMPEVASLWYDL
GLNYYHQANIIPCPTDEQQPGPSLNLKKAQECLKKAIQIESGNHSYWNALGVISMGKGLE
SYALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNMELAHEAFKIAQSLEPLYVNCWIGQ
ALIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNA
ISAAHVALCKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYQSAVELLQSMSSSEILVF
SLGSYARALCNSGQWEEAVQVFKSTPLQDLSDLVGLALAYWRARLFPESISAYERALAVT
SSEKEKAYILTALALLQHQQGNLDSAKTLLFKCSVLKEPISESLLCLCALGLVHSDAALA
AAALTELLKQGSASGGLVEQQCLLTCSLLALQGNYSAVQREASRAVHSNPGNPSLWAFLS
RVIPQYYPRKAQGGAVAGHIACLFSMTQGKRALLYSGVNQVACGRHSGEAPRRNALKTMQ
KAVLLCPDDPATWAGLMAACHTENTSCYLSGSAPHRRSLEHTLMSVVSEKVRSVEEIERP
LAQVLEGWVLQQAVAGLMQQGQLEQAESLCMQVLNVSPEHPAVMLSLAQVQCQRLLLTSG
SNVLPEQVLEQLNKAVMMNPTNLGAWHWLAEVCRSQGLLVQAVMAYRQSLQLALQLGTHS
FQVASLLRLALLALGPCMAGVPGNDWKDLVMEATTEVLKLGSSPLALLFQALLQYVTKMA
ARETRRLLERLVYVSPDDFPVTVMQVASWYLLRHLHAKNDQELVNVLLQHAKMNGNQRLL
EFYTALTSSSS
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaagttaaaaccgcactgaaaagtgccagagaggccatcaacaacaaa
gagttcaaagaggtcctaaagcactgcaagactgttctgaaacttgaaaagaacaattac
aatgcttgggtgttcatcggcaaggcagccagtgagctggaacaacctgatcagtcacaa
gcagcctataaaaaagcagtggagctggagcctgatcagctgctggcctggcagggttta
gcaaatctttatgaaaatactgatcagtgggatttcaaagatgagctccccaatgtctac
cagaagcttgtggagctttatgcaaggacagataaaaataaaagctatgacatgatcaaa
aagctgtccgatatttaccagtctgacagggactatttgaagctggctaaggtttgtctc
cagctcatccagctgaaggaagatgagggtgtggataagaaggagttagtgcagttgttg
caaaacatgacccaattcctctctgacggcatcagcaatgaggagcaggacaatgagact
caacagcatctgataacagcatttgagaaggccatgattctgattgaacctgtgccagga
gaggagcacaagaagctgtcgactggttatattaaatgtctttcgaaactaccacatgaa
gaaggcaaaatgaaagaggcatgccagtccatgttgtctgtgtacccaagacaaacctat
cctctcgaggttcttagcagtcactaccttaaaacaaataacatggatgaggatgcagtc
agctgtttttccagactcctggaactagtccctaacaatggattgggtcacctgggtctt
ggtaccaaagctctgctggagggaaggtataaagaagctgtcgatgagctggcaaagggc
atagagacgatgagctcagcaacaggatggtacagcctggctgaggctcagtttaaaata
cacagatactctgacagcgctgcatcttgcacacaaggcttaaatgtttgtatgtccgat
gacaagaagcaaaaggacaaactccttcgactgaagctggaggctttagtaagaagtgaa
ggagagcagggcgccgatcaggctttggagacattttcccagattacacaggctgaaaaa
gatccggttctgttggccctgaaaggacgtgcatacctcaacaaaggacagattgatcaa
tcactcaagctgttgtcggagctcgaaggttccaatccaaacctgtcgcagggaatgact
ctgagaggactggcacatttagctgaaggtcagcttcagctggcagagcagagcttttta
caggctacaaagcagaccccagacagtggggaatattttttcttccttggaaaactttat
tgggatatgggctcagagacccgtaaagaccggagtaaagctcatacatacttattaaag
gctgcaaagttagatccgcatcttggatgtgcatttcggtacctgggccattattaccgg
gaggtggcaaatgataatgctcgtgcacaggggtgctacaggaaggcttttcagttaaat
agtgatgatgctgagtctggagctgcttgggtggatctcagtatgggacagggagatatg
gatagtgcattggcaacacttgagtcagtgatagagaaagccactccaggctcagctaag
tgggcccagatgagacgaggcctgtactacctgaaggttggagagcatcaacccgccata
actgatttgcaggcggctttgagggcggatcctgaggactgggtttgttgggaatgttta
ggcgaagcgtaccttaaccggcggagcttcacagcagctctgaaggccttcgacaaagca
catcagcttcagcccagctccatctacagcgtctaccgggcagctgccatcaaacagact
ctgggaaagttcaaagaggcagtggatgagtatttgcaaatcacaacacagcaggactat
gttcctgctcttaaaggtcttggggagtgccagctgtctttggcaaagagtttaatggaa
gactgcagagatggaggagccattgacctcattcaagaagccatacacaacctcttcaga
gctgtgcagctgcgaccagacctgtcttgtttgtggaagctgctgggagacgcttgtact
gccgttagagttgtctcgccaagcagggctcgagttgtggtgccaaccttattgactgga
ttcgactgcaccataaaggatcgcatgttgaaccaagctcagacactcaaagctggtgca
aggtgttacgctcatgctttgaagttaatgcctgaggttgccagcctttggtatgactta
gggttaaactattaccaccaggccaatatcataccttgccccacagatgaacaacaacct
ggcccctctttgaacctgaagaaggcacaggagtgcttgaaaaaagctatccagatagag
agtgggaaccatagctactggaatgccttgggagtgatttctatgggcaaaggtctggag
agctatgctttggctcaacattgcttcatcaagtccatacaagttgagccaaataatgtc
gttgcgtggacaaacctcggtacgctgtatttaaaaaaggacaatatggagcttgcacat
gaagccttcaaaattgcacagtctttggagccactgtacgtcaactgctggattggacag
gcgctcatcgcagaacgcgtgggaagctacgacactatggatcttttcaggcacaccaca
gaactcagcacacatatggaaggggtcaaaggttatgcctactgggtttgttccaccctt
ctggataagagtaacagagacagtgaactgtaccgctacaacattgtgcaaatgaatgcc
atctctgctgctcatgtagcactctgcaagtacacagaaagaatccagtctgacccagat
gcctttattatgctgggttaccttaatgaacatctacagctgaagaggcaggccttacag
gcataccaaagcgctgttgaacttcttcagtccatgtcctcttcagaaatattggtcttt
tcacttggcagctatgcccgtgctttgtgcaactcaggccaatgggaggaagcagtgcaa
gtttttaagtccactccacttcaggatcttagtgacctggtagggctggctctggcctac
tggagggcgagactcttccctgaaagcattagcgcatatgagcgtgccttagctgtgacg
tccagtgagaaggagaaggcttatatcttgactgctctggccttgctgcagcaccaacag
ggcaacctagactcagccaagactctgcttttcaaatgctcagtgttaaaggagccgatc
tcagagtctctgctttgtttgtgtgcgctgggattggtgcacagtgatgctgcgctagct
gctgctgctctgactgagctgctaaagcaaggttctgcctcaggtgggttagtagagcag
caatgtctgctcacttgctccttgctggcccttcagggcaactacagtgcagtacaaaga
gaggcctccagagctgttcacagtaatcctggaaatccatccctttgggcttttctgtcc
agagtgataccgcaatattaccccagaaaggcgcaggggggcgcggtagctggccacatt
gcctgtctctttagtatgactcaagggaagagggcgttgttgtacagtggagtgaaccaa
gtggcttgtgggagacattctggagaagctcctcgcaggaatgcactgaagaccatgcag
aaagctgttctgctgtgtcctgatgatccggcaacatgggcaggattaatggcagcctgt
cacactgaaaacacctcctgttatctttctggctctgctcctcacagacggtcactggaa
cacactctaatgtctgtggtttctgagaaagtgcgtagcgtggaggagatagagcgccct
ctagctcaggttctggaaggctgggtattgcagcaggctgtggctggtctaatgcaacaa
ggacagctggagcaggctgagtccctctgcatgcaggttctcaacgtgtcccccgagcac
ccagcagtgatgctgtcactggcacaggttcagtgtcagcgcctcctcttgactagtggc
agtaatgtccttccagagcaggtcctggagcagctaaacaaagctgtaatgatgaaccct
accaaccttggagcatggcattggctggctgaggtgtgtcgtagccagggcctcctggtg
caggctgtaatggcttatagacagagtctgcagcttgcactccagctgggtacgcacagc
ttccaggtcgccagcctgcttcgactggctctgctggcccttggaccctgtatggctgga
gtccctggaaatgactggaaggatcttgtgatggaagccactacagaggttttgaagctg
ggctcctctcccctggccctcctcttccaggccttgctccagtatgtaaccaagatggct
gcaagggaaacgaggcgtttgctggagagactcgtttatgtttcacctgatgacttccca
gtgacggtgatgcaggtggcaagttggtatctcctccgacacttgcatgccaaaaatgac
caggaactcgtcaacgttcttttgcaacatgctaaaatgaacggaaatcaaaggctgttg
gagttttacacagcgctaacgtcttcctcatcctaa
DBGET
integrated database retrieval system
