Girardinichthys multiradiatus (darkedged splitfin): 124884049
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Entry
124884049 CDS
T08099
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC124884049
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124884049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124884049
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124884049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
124884049
NCBI-ProteinID:
XP_047247600
LinkDB
All DBs
Position
2:complement(51231095..51280296)
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AA seq
1565 aa
AA seq
DB search
MFNWVAKVVPQPAEAPGPVEASRTTAAEPVRNKEVQNAFVKNTEEASEDGQTNSGVIGWL
SNGFVSALPQPPGSPVLKGSNSDFRSGEDGDRTGVISWVTQGLTKVLPQPDEKYKEATET
KNTNEEHTEVFDVATMPDYDPLPHVPVVEVVSEEEGSEVESLTPQFPPKVVNWIKQIIPQ
PVILPSGGVPTEPPPKASRSSLDKVLSPPESLSRISLDTESTASGVVDWFVSGLGLKMPQ
LVLPSKDEAEGDTEVLQKVSSKLKPDMVLEDVESDNDGQQTYESHPKAAESPSPMRVSAQ
QQQQEETRTPSSSVQRRGNCDTNLEAPALDSMTITSQEDAETQTGRWTPFIESIKKEAED
VALATMEERLLQERMEMARLAEQVARQTAEMAVRQMASEGTSIKLSLESQELLDEPEPEL
PVPQDEDSKVEQGENTEKENTLVQEEQNTDAEESTIKEPEIPEPQQETSTSPTPGLEPGK
NFEPESEAGPEPETENQEASSEAVTQQPQKAEDALASNTDNAADKDEDASGDGCGAPVSC
DSFKNCLMRFPPTSECFGNINAFFKENGISLPKIPSMPKLPTQLSDVTRHIPSLPPEIRH
EFSQIRLTQFPRSIAQTLTELLPKGAEGSADHCLSGLTQSLSTIPQKLSQFPGRTQECFL
NIRNRLNSLMPQDAXKQQQQQKQKQDKKQQDLELNHLMQHSPLPPPHHPYLRSRSPSPSS
PSSSTLELPNVPSYLRLPPIASPPPKQLHPLPRQLSGLANPAFFIEDDSDVSAESSSRRP
AVNIEDIDHEKAGGAVGGGGGEEKSKTSQSLTPQDPKLTTLTVPVAPAGGRQSKGDKDGS
NRRAIWTKIRYTHSQSEDDDEEVTIPVRAWPSQSSLHSSEDMLKERPASAASQTSAVVNE
RLQELVRMFKERTEKAKEKLMDPDSSDEEGITTSPPQPVLEASPLDDEEESMKGGLSVGE
EERRGMESVAREETSGGCCKVKTTRWVQACLHLRFPASIDPFTNIMYVLWMLLVSLAWNW
NAWLIPVRWAFPYQAPDNIYYWLVTDYLCDLIYILDLTIFQPRLQFVCGGDIVCGKKEMR
KNYMKSKRFKLDVASLVPLELLYFKTGINPLLRLPRLLKINSFFEFNERLEAILTKAYIY
RVIRTTMYLLYCLHCNACLYYWTSTYIGLGSTQWVYDGVGNSYIRCYFFAVKTLITIGGL
PEPTSLFEIVFQLINYFVGVFAFSIMIGQMRDVVGAATAAQTYYRTCMDNTIKYMTSYRI
PKDVQNRVKTWYNFTWQSQGMLDEQELLTQLPDKMRLDIAVDVNYSIVSKVPLFQGCDRQ
MIFDMLKSLRSIVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDERTVFATLRAGSVFG
EISLLAVAGVNRRTANVIAHGFANLFILDKKDLNEILVHYPESKKLLHKKARKMLNKGKK
PEPKEEAREPPQVPAAPLKLVTPKLLRAALEITERSSGLKGALAKLKEKTSKSSISLQRS
FSTSLRPPSPSLSSGPERLSVSASSMTLHSASYSCNLEDLPPAQIHGDTVKKDDSEDERD
EGGKM
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggcgaaagtggttcctcaacctgctgaagctccggggccagttgaa
gcttccaggaccactgctgctgagcccgtaagaaacaaagaagttcagaatgcgtttgtg
aaaaacacagaggaagcttcagaggatggtcagaccaacagtggagtgattggatggctg
tctaatggattcgtcagcgccctgccacaacctcctggttcccctgtgctcaaggggtcc
aactcagatttcaggtcaggagaggatggagataggacgggggtaatcagttgggtcact
cagggtctgaccaaggttctgcctcagcccgatgaaaaatacaaagaggcgaccgagacc
aagaacactaatgaggagcatactgaggtgtttgatgtggcaacaatgccagactatgat
ccgcttccacacgtccctgtggtggaggtagtgtcagaggaggaagggtcggaagtggag
agtttgacccctcagtttcctcctaaagtggtgaactggataaagcagataatcccccag
cctgtgattctgccctctggtggcgtaccaacagaacctccaccaaaagcctcacgctct
tctttagacaaagttctgtctccacctgaatctctcagtagaatctcactggatactgaa
agcacagcctcaggagtcgttgactggtttgtgtcaggactgggcttgaagatgcctcag
cttgttcttccatccaaagatgaagctgagggtgatactgaagtgctgcagaaagtttca
tccaaactcaagccagatatggtgctggaggacgtggagtcagataatgacggccagcag
acttatgaaagtcaccccaaagctgcagaatccccaagtccaatgagagtctcagcacag
cagcaacagcaggaggagacaaggacaccatccagctctgtgcagcgtcgtgggaactgt
gacaccaacctggaggcaccagcattagacagcatgacaataacatcacaggaagacgct
gagactcagacgggccgctggactccatttatcgaaagcatcaagaaggaggctgaagat
gttgctttggccactatggaggaacgtctgcttcaggagcgcatggaaatggcccgtctg
gctgaacaggtggcccggcagacagcagagatggctgttagacaaatggccagtgaggga
acatccatcaagctctcactggagagtcaggagctgctggacgaacctgaacctgagttg
ccagtaccacaagacgaagacagcaaggtggagcaaggagaaaacacagaaaaagaaaac
actttagtccaagaagagcagaacacagatgctgaggaatcaaccatcaaggaaccagaa
atacctgagccgcagcaggagacctcaacctccccaacaccaggtcttgaaccaggaaag
aattttgagccagagtcagaagctggaccagaaccagagaccgagaaccaggaagccagt
tcagaagctgtgacccagcagccccagaaagcagaagacgctctagcttctaacacagac
aatgctgcagataaagatgaagatgcttctggtgacggatgtggagctccggtcagctgt
gattcatttaagaactgcctgatgcgctttcctcccacctctgagtgctttggcaacatc
aacgcgttcttcaaagagaacggcatctctcttcctaaaataccctccatgcctaagctc
cccacccagctctcagacgttaccaggcacataccctccctgcctcctgagatacggcac
gagttctcccagatcagactcacacagttcccacggagcatcgcccagaccctcactgag
cttctacccaaaggtgcagagggttcagcggaccactgtctctccggcctcactcagagc
ctttctactatcccacagaagctgtctcagtttcccggacgaactcaggagtgcttccta
aacatccggaaccgcctcaacagccttatgccacaagatgcctagaaacaacaacaacag
cagaaacaaaagcaagataagaagcagcaggatttagaactcaatcatctcatgcaacac
tcacctctccctccccctcatcatccttacctgaggtctcgctccccttctccatcctca
cccagcagtagcacccttgagcttcccaatgtcccctcctatctacgcctgccgcccatc
gccagcccgccaccgaagcagctccacccgctgccccggcagctgtctgggctcgctaat
ccagctttcttcattgaagatgactcagatgtttctgcagagagttccagccgccgtcca
gctgtaaacatcgaggacattgaccatgagaaagcaggaggagcagtaggaggaggtgga
ggcgaggagaagagcaagacatctcaaagtctcacccctcaggaccccaaacttacaacc
ctgaccgtccctgtggctcctgcaggaggacgtcagagtaaaggagataaagatgggagc
aaccgaagggccatctggacaaagatcagatacacacattcccagagtgaagatgatgat
gaagaagtaaccataccagtcagagcctggcccagtcagtccagtctgcacagctcagaa
gacatgctaaaagagcgtccagcctctgctgccagtcagaccagtgcagtggtcaatgaa
cgacttcaggagctggtcaggatgttcaaagagagaacagagaaggccaaggagaaactc
atggatccagacagctcagatgaagaaggcatcaccacctctcctcctcagcctgttcta
gaagcctcacccttagatgatgaagaggaaagtatgaaaggaggtttatcagtcggtgaa
gaagagagacgaggaatggagagtgtggcaagggaggagacatctggtggctgctgcaag
gtgaaaactactcgatgggtccaggcctgtttgcatctccgattccctgccagcatcgat
cccttcaccaacataatgtacgttctttggatgctcctggtttctctggcctggaactgg
aatgcctggctcatcccagtccgctgggcattcccctaccaagcaccagataacatttac
tactggctggtgaccgactacctgtgcgaccttatttacatcttggacctcaccattttc
cagccacgcctgcagtttgtttgtggaggggacatagtgtgtggcaagaaggaaatgaga
aagaattacatgaaaagcaaacgcttcaagttggatgtagccagccttgttccattggag
ctgctttattttaaaacaggcatcaaccctctgctgcgtctgcctcgtctgctgaagatc
aactccttctttgagtttaatgagcgtctagaggccatcttgaccaaagcctacatctac
agggtgatccgaactaccatgtatcttctctactgtcttcactgcaatgcctgtctctac
tactggacgtccacctacatcggactgggatccacccagtgggtgtacgacggtgtcggg
aacagttatattcgatgttacttctttgcggtgaaaactctgatcaccatcggaggtctc
ccagaacccacctccctgtttgagattgtcttccagctcattaactattttgttggagtc
tttgccttctccatcatgattggtcagatgcgcgatgttgtcggtgcagccacagcagcc
cagacttactaccgcacctgtatggacaacaccatcaaatacatgacgtcctatcgcatt
ccaaaagacgtccagaaccgggtcaaaacctggtacaacttcacttggcagtcacaaggc
atgctggatgagcaggagcttctgacccagctgccagataagatgcgtctggacattgct
gtagatgttaactactccattgtgagcaaagtccctctcttccagggttgtgacagacag
atgatttttgacatgctgaaaagcctgcgttctattgtctacctgcctggtgattatgtc
tgcaaaaaaggcgaggtgggtcgagagatgtacatcataaaagccggggaggtgcaggtg
gttggaggacctgatgagaggacggtgtttgccactctcagagcaggatctgtttttgga
gagataagtttacttgcagtggccggagtcaacaggcgcacagccaatgtgattgctcat
ggatttgccaacctgttcatcctggacaagaaagacctgaatgagatcctggtccactac
cctgagtcaaagaaactgctgcacaagaaagccaggaagatgcttaataaaggaaaaaag
cctgaacccaaagaagaagctagggaaccgcctcaggtaccagcggctcctctaaagctg
gtgactcccaaactgctcagagcagctcttgagataactgagagatcttcaggactaaaa
ggagctctggctaaactcaaagagaagaccagcaagtccagtatctcattacagcgatcc
ttctccacctctttacgtcctccatctcctagcctcagctctggacctgaaaggttgtct
gtctctgccagctccatgacgcttcactcagcttcatacagctgcaaccttgaagatctt
cctcctgcacagatccatggtgacacagtcaaaaaggatgatagcgaagatgagcgggat
gaaggtgggaagatgtaa
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