Glycine max (soybean): 100776641
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Entry
100776641 CDS
T01710
Name
(RefSeq) WD repeat-containing protein PCN isoform X3
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100776641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmx03009
]
100776641
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100776641
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
PQQ_2
CNH
Motif
Other DBs
NCBI-GeneID:
100776641
NCBI-ProteinID:
XP_003549373
UniProt:
A0A368UHN8
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Position
17:39044909..39051656
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AA seq
817 aa
AA seq
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MAELFRLSSVEWSPSPVIALATSFDGSRVAAARKDGSLEIWLVSPGSIGWHCQLTIHGNP
NGRVTSLIWCPGGPDGSRLFSSNIDGSVTKWDLFHLTQKTVLPSDSVTIWQMAVTFPKSD
EINDKRKGGQMGNGFHDFDEHESIESDEDDDSGSPGPLGLLVGEHPRVAIALDNGCVRIC
DISDTDEFILVKSLPPVKGRVLSVTWSTDANYIYSGSSDGLIRCWNATLGNEIYRITAGL
GGLGNGHELCIWSLLSLRSGTLVSADSSGSVQFWDSQHGTLLQAHSLHKGHVHALAACPS
HNRVFSAGSDGQVILYKLSSSQSTSSNDINSPSTMKRWIYVHYVRAHTHDIRALAVAVPI
SHEDIKPEKRIKRARRAENPISFRYHKWAHLGVPMLISAGDDTKLFAYPVKEFTMFSPHD
ICPAPQRTPIQLVHNSVFNQRKLLLVQSSQKIEVQLLQLKNVRTSGGFTKNVVVAQVNSK
ASQKIICSTISNSGALFAYSDHKKPSLFQLKRDEVGKIKWDVRKRELPQILPFAHSMIFT
HDSSKLIVAGHDKRIYVVNVGGPDEVKSELLHTFTPLRKSQDQELPPTEPPITRLFTSSD
GQWLAAVNCFGDIYVFNLEILSQHWFISRLDGASVTAGGFPPQNDNVLIVTTSSNQVYAF
DVEAKQLGEWSKRHTYALPRRYLEFPGEVIGLSFPPSETSSSPSATSSSVVVYSSRAMCL
IDFGLPVEQDESDMLNTKDSRAMNSQNFNVKKRIEVKKMIEVKKEHNRRNFEVIPFENPV
LCLGHTSKNSIFMVDKPWLQVVKSLEGRPVHRHIYGT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggccgaactcttcaggctcagttccgtcgagtggagcccttcgccggtcatcgcttta
gccaccagcttcgacggctcgcgtgtcgccgccgcccgcaaagacggctccctcgaaatc
tggctcgtctctcccggctccatcggctggcactgtcagctgactatacacggaaaccct
aacggaagagtaacgtcgcttatttggtgccccggcggccccgacggaagccgcttgttt
tcgtcaaacatagatggctccgttactaagtgggatcttttccacttgacgcagaagacg
gtgctgccatcggacagtgtcacaatctggcaaatggcagtgactttccctaagagtgac
gagatcaatgataaaaggaagggtggacaaatggggaatgggtttcatgattttgatgaa
catgagagcattgaaagtgatgaagatgatgattctggttcacctggtcctctcgggcta
ttggttggtgagcatccacgcgtggcaattgcccttgacaatggatgtgtgagaatttgt
gatatctctgacacagatgaatttattcttgtaaaatctttgcccccggtgaaaggacga
gttttaagtgtgacttggagtacagatgctaactatatatattcaggaagtagtgatggg
ttgatacgatgctggaatgctacattgggcaatgaaatctataggattacagctggactt
ggagggttgggcaatggacatgaactttgtatatggtcattactgtctttaaggtctggt
acacttgttagtgcggacagcagtggtagtgtccagttttgggacagtcaacatggaact
ctcttgcaagcacattctttacacaagggacatgtacatgctctggcagcatgtcctagt
cataatagggtgttctctgctggttctgatggccaggtaattctttacaagctatctagt
agtcagtcaacatcatccaatgatatcaattctccatcaacaatgaagagatggatctat
gttcactatgtaagggctcatacacatgacatcagggccctagctgttgctgtaccaata
agtcatgaagatattaagccagaaaagaggattaaaagagctcgacgtgcagaaaatccc
attagtttccgttaccataagtgggctcatttgggggttcctatgcttatctcagcagga
gatgacacaaaactttttgcatacccagtgaaagaattcaccatgttttctcctcatgat
atctgtcctgcgcctcagagaacacccattcaactagtgcataattctgtctttaatcaa
cgcaaactgcttttagttcaatcttcgcaaaagatagaggttcaattgctacaactaaaa
aatgtccgcacttctggaggctttacaaagaacgttgtagtggctcaagttaacagtaag
gcatctcagaagataatttgcagcaccatttctaattcaggggcgctatttgcatactct
gatcataaaaagcctagtctttttcaattgaaaagggatgaagttggaaaaatcaagtgg
gatgttagaaaaagggagcttcctcagatattaccatttgcccattctatgattttcact
catgactcctccaagttgatagtagcaggtcacgataaaaggatatatgttgtgaatgtt
ggggggccagatgaagttaagtcagaattactgcatacttttacaccccttcgcaaatca
caagatcaagaattacctccgactgagccacccataacaagattgtttactagttctgat
gggcagtggttggcagctgtgaactgctttggggatatatatgtatttaacttggagata
ctaagccagcactggttcatttcaagattagatggcgcctctgttacagctggtggattt
cctccccagaacgacaatgtactgatagttacaacttcctcaaatcaagtgtatgctttt
gacgtagaggccaagcagttgggagaatggtccaaacggcacacatatgctcttcctagg
agatacctggaatttcctggtgaagttattgggctctcattccctccatcagaaacttca
tcttctccatcggcaacttcatcttcagttgttgtttacagctccagggctatgtgcttg
attgactttgggttgcctgtggagcaagacgaaagtgatatgctaaatactaaagattca
agggcaatgaattcacaaaattttaatgttaagaagaggattgaagttaagaagatgatt
gaagttaagaaggaacataataggaggaactttgaagttatacctttcgagaatcctgtt
ttatgtttaggtcatacttcaaaaaattccatctttatggtagacaaaccatggttgcaa
gttgtcaagagtttagaaggccgaccagtccacagacatatatatgggacatga
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