Glycine max (soybean): 100787082
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Entry
100787082 CDS
T01710
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100787082
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100787082
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
v110
Motif
Other DBs
NCBI-GeneID:
100787082
NCBI-ProteinID:
XP_003526981
UniProt:
I1KC87
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Position
6:14724167..14726872
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AA seq
408 aa
AA seq
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MTSTLLSLLFLLFSLLIPSFISSSPVRNPEEVVQEVNRKINGSIARPRRNLGYLWCGSGN
PIDDCWRCDPNWEQNRQRLADCAIGFGKNAIGGRDGKIYVVDDDGDDDAVNPKPGSLRHA
VIQDEPLWIIFARDMVIQLKEELLMNSFKTIDGRGASVHVAGGPCITIQYVTNVIIHGIH
IHDCKQGGNAMVRDSPRHYGWRTVSDGDGVSIFGGSHVWIDHCSLSNCNDGLIDAIHGST
AITISNNYMTHHDKVMLLGHSDAYTQDKAMQVTIAFNHFGEGLVQRMPRCRLGYFHVVNN
DYTHWEMYAIGGSANPTINCQGNRFVAPDDRFSKEVTKREDAPESEWQDWNWRSEGDLLV
NGAFFTSSGAGASSSYARASSLSARPSSLVGSITTGAGALSCKKGSPC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcactcttctgtctttgcttttcttgctcttctcccttctcattccatccttc
atttcctcttcaccagttcgaaaccctgaagaagtcgtacaagaggtcaacaggaaaata
aatgggtctatagcaaggcctaggagaaacttgggctacctctggtgtggcagtggcaac
cccattgatgactgttggaggtgcgaccccaactgggagcagaacaggcagaggctagct
gactgcgcaatcgggttcggcaagaacgccatcggcggcagggacggcaagatctacgtg
gtggacgacgacggcgatgacgatgccgtaaacccgaagccgggaagcctccggcacgcc
gtgatccaagacgagcccttatggataatcttcgcaagagacatggtgatccagctgaag
gaggagcttctcatgaactccttcaagaccatcgacggaagaggcgccagcgtgcacgtt
gctgggggtccatgcataacgatacagtacgtgaccaacgtcatcatccatgggattcac
attcacgattgcaaacagggagggaacgctatggtgcgggactccccacggcactacggg
tggagaaccgtgtcggacggcgatggcgtgtcgatcttcggagggagtcatgtgtggatc
gaccattgctcgctctctaactgtaacgatgggttgatcgacgccatccatggctccacc
gctattaccatttctaataactacatgacgcatcatgataaggtcatgttgttgggtcac
agcgatgcttacacccaggacaaggccatgcaagtcactattgctttcaaccactttggt
gaaggccttgttcaaaggatgccaaggtgtaggcttgggtatttccatgtggtgaacaat
gattatactcactgggaaatgtatgccattggtggaagtgctaatccaaccatcaactgc
caaggcaataggtttgttgcacccgatgacagattcagcaaagaggtgacaaaacgtgaa
gatgcgccagagagtgagtggcaggattggaattggaggtcagaaggggacttgttagta
aacggtgcgtttttcacatcatcgggtgctggagcctcctctagctatgcaagggcttct
agcttaagtgcaagaccatcttcccttgttggttccataacaacaggtgctggtgcactc
agttgtaagaaaggttctccttgctga
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