Glycine max (soybean): 100797777
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Entry
100797777 CDS
T01710
Name
(RefSeq) probable ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100797777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100797777
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100797777
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100797777
Messenger RNA biogenesis [BR:
gmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
100797777
DNA repair and recombination proteins [BR:
gmx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
100797777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
CP2
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
100797777
NCBI-ProteinID:
XP_003553162
UniProt:
K7MQ01
LinkDB
All DBs
Position
18:complement(4173139..4190625)
Genome browser
AA seq
920 aa
AA seq
DB search
MSVETMCSVLKKYFGFSDFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVAKKT
GIVVSPLISLMQDQVMALKQRGIKAEYLGSAQKDFTVHSKAEHGQFDILFMTPEKACTVP
SSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVGLTATATEKV
RYDIISSLKLNNPYVTIGSFDRTNLFYGVKLLNRGQSFIDELVREISKEVTNGGSTIIYC
TTIKDVEQIFKSFAEAGIEAGMYHGQMNGKAREESHRLFVRDELQVMVATIAFGMGIDKP
NIRQVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKGDFYCGDVKSEKQRKA
IMESLLAAERYCVLTTCRRKFLLEYFGEKFPADRCGNCDNCKISRKERDMSREAFLLMAC
IHSCRGIWGLNMPIDVLRGSRAKKILDVQFDKLPLHGLGKNYPANWWKALRHQLISQGYL
KEIVSDRYRTISVSSKGEQFLASSRPDYQPPLVLTLTAEMLGEEDNGNTQEAFKTLSTSE
SEGFSEAEGQLYQMLLEERLKLARSVGTAPYAICGDQTIKKIALTRPSTKARLANIDGVN
QHLVTEYGDDFLQVIQKLSQVLNLSLDGEARVATASLQTNEVRKVSLVTNKSNKLTPAKF
EAWKKWHEDGCSIHEIANFPGRSAPIKEQSVAEYLLEAAQEGLPFDWARFSEMIGLTQGI
ISEIQGAISKVGSTDKLKPIKNELPEEISYQHIKTYLTMRNCGISLEAIQSGSNQTGKDD
EPAHNASNLSDPTLETCHVERYCEDGISAKSSLEKWDLEIDEVPILPVNGSEVQKLPLVC
EGEFTNKRQKVSETKEVNSTKLKATESSVVEWLKNLDEGATLSDVLEHFNGSSKDSVVEL
LNCLQSDFSIYSKGGTYKIL
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggagaccatgtgctccgttctcaagaaatactttgggttttcggattttcgg
ccttatcagagagaagttattgagaaaattattgagaaaagggattgtttggtagtcatg
gctactggtagtggcaagtccttgtgttatcaggtacctcctttggttgctaaaaagact
gggatagttgtgagccctctgatatctttgatgcaagaccaggtgatggctttgaaacaa
cggggcatcaaagctgaatatcttggaagtgctcagaaggatttcactgtgcactctaaa
gctgagcacggtcaatttgacattctgttcatgactcctgagaaggcatgcacagttcct
agcagtttctggtccaacttactaaaggctggaattagtctttttgctgttgatgaagcc
cattgcatatcggaatggggacatgattttagggttgaatacaagcatttagacaagcta
cgtgaggttttgctagatgttccttttgttggtctaactgcaactgctactgaaaaggtt
cgatatgacatcatcagttccctgaagctgaataatccttatgttacaattggttcattt
gatcgcacaaatcttttctatggtgtcaaactattgaaccgaggacaatctttcattgat
gagcttgtgcgagaaatttcaaaagaagtcactaatggtggttcaactataatttattgc
acaacaatcaaagatgtagagcagatattcaagtcatttgcagaagcgggcattgaggca
gggatgtaccatggccaaatgaatggaaaagctcgagaggagtctcatagattatttgtt
agagatgaactgcaagtcatggtggccaccatcgcctttggcatgggcatagataaacct
aacattagacaagtgattcactatggttgccctaagagtctagagtcctactaccaggaa
agtggacgatgtggtagagatggtatagcttctgtttgttggctatactacacaagaagt
gactttgccaagggtgacttttattgtggagatgtgaaatcagaaaaacaaagaaaagct
attatggagtcattgcttgctgctgaacgctattgtgtgctgacaacttgcagaagaaag
ttcttgcttgaatactttggggaaaaattcccagctgatagatgcgggaactgtgataat
tgcaaaatctcaaggaaggagcgtgacatgtcaagggaagcattccttctaatggcttgc
attcattcatgcaggggcatatggggccttaatatgcccattgatgtcctgcgcgggtct
cgagccaagaaaattcttgatgttcagtttgacaagcttccacttcatggactggggaaa
aattatccagcaaattggtggaaagcacttagacatcaattgatttctcaaggttatttg
aaggagattgttagtgacagatacagaactattagtgtcagttcaaaaggagagcaattt
ttggcgtcttctagaccagattatcaacctcccttggttttgacattgactgctgaaatg
cttggagaagaagataatggaaacacacaagaagcattcaaaactttatccacttcagaa
tcagaaggtttttcagaggctgagggacagctctaccaaatgcttttggaagaaagatta
aagcttgcaagaagtgttggaacagctccatatgctatatgtggtgatcaaacgatcaag
aaaattgcattgacaagaccatctacaaaagcaagactagcaaatattgatggtgtgaat
cagcacctagtaacagaatatggagatgattttcttcaagttattcagaaactgtcacaa
gtattaaacctatcattggatggggaagcaagagtcgcaacagcaagtttgcaaactaat
gaagtaaggaaagtatctctagtaaccaacaaatccaacaagttgacaccggcaaagttt
gaagcttggaaaaagtggcatgaagatggttgttctattcatgagattgctaactttcca
ggtagatcggctcctataaaagaacaaagtgttgctgaatatctgctggaagctgctcaa
gaaggattaccttttgattgggctagatttagcgagatgataggactgacacaagggatc
atatcagaaattcagggtgctatttcaaaagttggatctacagataagctgaaacctata
aaaaatgaattgccagaagagataagttatcagcacatcaagacttatttgacaatgcga
aactgtggaatatccttagaagcaattcaatctggaagtaaccagactgggaaagatgac
gaacctgcacacaatgcttcaaatttgtcagatcctactttagaaacatgccacgtggaa
agatattgtgaagacggcatctctgccaaaagttctctggaaaaatgggacctagaaatt
gatgaggtgcctattctacctgtcaatggttcggaggtacagaagcttccattagtctgt
gagggggaattcacaaacaaacgacaaaaagtcagtgaaacaaaggaagtaaattcaact
aaattgaaggctacagagagttctgttgtagagtggttgaagaaccttgatgaaggggct
acattgagcgatgttttggaacacttcaatggatccagtaaagattccgtggttgaactg
ctaaattgccttcagtctgacttttcaatatatagtaaaggtggcacgtataagattctg
taa
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