Glycine max (soybean): 100806953
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Entry
100806953 CDS
T01710
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100806953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100806953
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100806953
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
100806953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100806953
NCBI-ProteinID:
XP_003518190
UniProt:
I1JD36
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All DBs
Position
2:6137902..6141576
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AA seq
286 aa
AA seq
DB search
MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV
KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQHCLLGGKSGEGA
GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVEVAAGTSND
EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSGVSISVNRQGHIC
GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDSEIASAEADEES
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtttatctcttggagaaacgcatttcatccaaggtggcattgctcaagatctt
cgttgtgatggtagaaagagattgacatatcgaccaatctctgttgaaactggagtgatt
ccccagaccaatggttcagcaagagtcagaatgggtgccacagatgttattgccagcgtt
aaggctgaacttggaaagccaagcttgttgcaacctgacaaaggaaaagtctctatatat
attgattgcagttcaacagcagagccagcttttgagggtagagggggtgatgagttggca
gcagaactgtcaaatgctcttcaacactgtctcttgggtggtaaaagtggagaaggtgct
ggaattgacctctcatcgcttattgttgtcgaaggaaaaatttgttgggatctttacata
gatgggcttgttgttagttcagatggaaatttgttggatgctctaggcgctgccattaag
gctgctttgagcaatacaggtattccaagagtcgaagttgctgctggaacgtcaaatgat
gagcatccagaagttgacgtaagcgacgaggagtttctgcagtttgatacatcaagagtc
cctgtcatagttacactgactaaggttgggaggcactatattgtggatgcaacatctgaa
gaggaatcacaaatgagctctggtgtttcaatctctgttaataggcaagggcacatttgc
ggtataaccaaacgaggaggtgtggggctggatccaagcatcattctcgatatgatatct
gtcgctaagcatgtaagcgagcaattaataaacaaattggattctgaaattgcttctgct
gaagctgatgaggagtcatga
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