Glycine max (soybean): 100807262
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Entry
100807262 CDS
T01710
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100807262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100807262
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100807262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
100807262
NCBI-ProteinID:
XP_014634956
UniProt:
A0A0R0IWG1
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Position
8:complement(44989025..44995649)
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AA seq
1246 aa
AA seq
DB search
MLIFARCLLGGSWWTLEDKKEILRCGVFLIIVRRNRKEKGLFFVLVLLFEMNEYTGPARR
TRSKGVEVRGGLIRSRKRRRVVDYDDDELVFVKELKGGGEGASAKIEKSMERGFEFLGES
EDDGPFEVVEIDEDDDEAEEEVYGECEQKKKRVEVKVEEKDEGPEVLCYVAAEKVASFGG
GDDDECGSRPENPVVMLCVSDDGGGQSEEDHGRDRSSVSSDDGFGSSSSSSSEDDDSSDD
DFKVGVEDERADDEEDYSSIEEESESDDDSSCDDERGELYKKFVKERVRNLVSKSGSSGV
SRRKGKGNRRMQVEEEEMVEKWNGADCASVTSSKSCTCKDETRQAEVIDDAAERGESVNA
AADELFANQVPRPSLPLAARETVPLNGNCQKKKPVEAESAKEIDMLWNELDIALQETEAG
DSTMLKKKRLPSGVRSVSPLPKRQEKMGDSAKVVMKEDDGNGDKNGLHEVLRMSNRSKNI
GFKFFTECFWGKPDSDKDDPMELEEKDGVVVQGQTQPLACGVGIPLTWDFLKKNPVEKSE
AEKELDMLWAEMEMLLRAGEIGIQVDEARAKEENPALQCKHDTIFNEEIGVYCRLCGWIA
TEIKYIMPPFVDSKRSGREAFPGAWKTSQFDGATFDDCGDDSGAAWSHNEGTVWDIISDI
KKGLFPHQQEGFEFIWTSLAGTTNLAELKRVDPGTEGGCIISHAPGTGKTKLTMVFLQTY
LQLFPKCLPVIIAPANILLTWEDELRKWNIGIPFHNLNNAELSGKENVINEFGYQELNKD
AIRMLKLCSWYKEKSILLISYNLYEKLAGGKSEDDGEKEKKNRKIRKEKKRASIETAMGK
VLRDYPGLLVLDEGHTPRNQRSCIWKVLSESRSQKRILLSGTPFQNNFLELFNIFCLMKP
SFSDNIPQELKKFCQSKLIQERKASKDVSWESINSGNPADEKIKQLKLLMNPFVHVHKGS
ILQKNLLGLQDCVLILKPEILQQKILDSIECSQNGLNFEHKLALVSVHPSLFLNCSLSKK
EESVIDMDQLKKCRLDSYEGVKTKFLMEFVNLCDAVDEKVLVFSQFIDTLILIKDQLESA
FNWSEGREVLFMHGRVDQKQKQSLIHSFNDANSQAKVLLASIKASSEGINLVGASRVVLL
DVVWNPSVERQAICRAYRLGQKKVVYTYHLLAQGTPECTKYCKQAEKNRLSELVFSNRNA
ESDKLKRSGVIEDKVLDAMVQHEKLKDIFGECLVQPKEGDQETLCP
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgctcattttcgctcgttgccttctcggtggatcctggtggactctagaggataaaaaa
gagatcttgcgttgtggggtgtttctgattattgttcgaagaaacaggaaagaaaagggt
cttttttttgtgttggttttgttgtttgaaatgaatgagtatactggaccagctcgtagg
acgcgaagcaaaggagtcgaggttcggggtggtttgatcaggagtcggaagaggaggaga
gtggtggattacgatgatgatgaattggttttcgtgaaagaactcaagggtggaggtgaa
ggtgcgagtgcgaagattgaaaaatctatggaaaggggttttgagtttctgggagagagt
gaggatgatggtccttttgaggttgttgaaattgatgaagatgatgatgaagctgaggaa
gaggtgtatggggaatgtgagcagaagaagaagagggttgaggttaaggtggaagagaag
gatgaaggccctgaagtgttgtgttacgtggctgctgagaaagttgcaagctttggtggt
ggtgacgatgatgagtgcggttctagacccgagaacccggttgttatgctgtgtgtttca
gatgatgggggtggtcagagcgaggaggaccacggcagggatcgtagtagcgtgtcttct
gatgatggatttggttcgagttcgtcctcttcgagcgaggacgatgattcaagtgatgat
gattttaaggttggtgttgaggatgaaagggctgatgatgaggaagactattcaagcatt
gaggaggagagtgagagtgatgatgattcctcttgtgatgatgagaggggagagttgtac
aagaagtttgtgaaggagagggtcagaaatctggtgagtaaatccgggagcagtggagtt
agtagaagaaaaggtaaagggaatcggagaatgcaggtggaggaggaggagatggttgag
aaatggaatggtgctgattgtgctagtgtgacatctagcaaatcgtgtacttgcaaggat
gaaacaaggcaggcagaagtgatagatgatgcagcagagagaggagaaagtgtcaatgct
gctgctgatgagctctttgctaatcaggttccgagaccgagtctgccgttagctgctagg
gagacagtccctttgaatggcaactgccagaagaaaaaacctgtggaagcagaatctgcg
aaggagattgatatgctatggaatgaattggatattgctcttcaagaaactgaggcagga
gattcaactatgttgaagaagaagcgtttgccatcaggtgtgagaagtgtttctcctttg
ccaaaaaggcaagagaagatgggagattcagctaaagttgttatgaaggaggatgatgga
aatggtgacaaaaatgggctccatgaagtcctaaggatgtcaaatagatcaaagaacata
ggttttaaattcttcaccgaatgcttttggggaaagcctgattctgacaaagatgatcca
atggagttggaagaaaaggatggtgttgttgttcagggtcagactcagccattagcttgt
ggggtgggaatccctttgacatgggactttctgaagaagaaccctgttgaaaaatcagag
gctgagaaagagttagacatgttgtgggctgaaatggagatgttgcttcgagctggagaa
attgggatccaggttgatgaagcaagagcaaaggaagaaaatccagccttgcagtgcaag
catgacactatttttaatgaggagattggggtatactgcagattgtgtggttggattgcc
actgaaatcaaatacatcatgccaccatttgtggattccaaaagatccggtagagaggca
tttcctggtgcatggaaaacctcacagtttgatggagctacgtttgatgattgtggtgat
gactcaggggcagcttggtctcacaatgaaggaacagtttgggatattatttctgacatt
aaaaaaggcttgtttcctcatcaacaagaagggtttgagtttatttggacaagtttggca
ggaaccaccaaccttgctgagttgaagagggttgacccgggtactgagggtgggtgcatt
atttcacatgctcctggaacaggaaagacaaagttgaccatggtgtttcttcagacatat
ttgcaactgtttcccaagtgtctacctgttatcattgctcctgccaacatactgcttact
tgggaagatgagttgaggaagtggaacataggaattccattccataacctgaacaatgct
gaattgtcaggaaaagaaaatgtaattaatgaatttggttatcaagagctgaataaggat
gccataagaatgctgaagctgtgttcatggtacaaagagaagagcattctgttaattagc
tacaatttatatgagaagctagctgggggaaagtctgaagatgatggggagaaagagaag
aaaaacagaaagattcggaaagagaagaaacgtgcaagcattgaaactgcgatgggaaag
gttctgcgagactatcctggtttattagttcttgatgaagggcacacaccgaggaatcag
cgtagctgtatttggaaggttctttcagaaagtagaagtcagaagcgaatccttctttca
gggactcctttccagaacaattttctggaactcttcaatattttttgcttaatgaaacca
tccttttctgacaacataccgcaagaactgaagaagttttgccaaagtaaactgatacag
gaaaggaaagcttcaaaagatgtgagttgggagtccattaattctggaaatccggctgac
gagaaaataaaacagctgaaattgctgatgaatccctttgttcatgttcacaaaggtagc
attcttcagaagaaccttcttgggttacaagattgtgtactgattttgaagcccgaaatc
ttgcagcaaaaaattctggatagcattgaatgttctcaaaatggactcaattttgaacac
aaattggccttggtctctgtacacccatcccttttcctcaactgctctctctcaaaaaag
gaagaatctgttattgacatggatcagttaaagaagtgtagattggactcttatgaaggg
gtcaaaacaaaatttttgatggaatttgtgaatttatgtgatgcagttgatgagaaagtc
cttgttttcagccaatttattgataccttgatcttaattaaggaccaactcgagtcagcc
ttcaattggtctgagggcagagaagtgttgtttatgcatggcagggttgaccaaaagcaa
aagcagtccctaattcatagtttcaatgatgccaatagccaagcaaaggtgttgcttgct
tctataaaagcatcttctgaaggaattaacttagttggagcttcaagggtcgtgcttctt
gatgttgtttggaatccctcggtggaaagacaagctatttgccgagcatatagacttgga
caaaagaaggttgtttacacttatcatcttcttgcacaaggcacccctgaatgcaccaaa
tattgtaaacaagcagaaaagaaccggttatctgaactggttttctcaaatagaaatgct
gaaagtgataagctcaagagaagtggagtaattgaggataaagttcttgatgccatggtt
cagcatgaaaaactcaaggatatatttggtgaatgtctggttcaaccaaaggagggagat
caggagactttgtgcccctga
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