KEGG   Glycine max (soybean): 100815393
Entry
100815393         CDS       T01710                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
gmx  Glycine max (soybean)
Pathway
gmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100815393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmx03041]
    100815393
Spliceosome [BR:gmx03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100815393
 Complex B
    100815393
 Complex C
   U2 SnRNP specific factors
    100815393
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 100815393
NCBI-ProteinID: XP_003523375
UniProt: I1JYT2
LinkDB
Position
4:complement(49350809..49357754)
AA seq 509 aa
MSSTVLEVTRAAHEEVERLERLIVKELQNDPASNKERLYQSHRVRNMIDTITSTTEKLIG
IYEDSDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPVARVVDANDDYETLL
NEELQIEFSGEEALGRYLDLHELYYQYVNSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQ
YREYLANLLEYLLYFFQRTEPLQDLDRILSKVTTEFEESWAVGKVQGWENDNQENGHVLA
EHATIDLDYYSTVEELMEVGPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDKK
HFAKGARGVEKNGVAAVSQEDGNSKEIALMEAKMTKLCDLLEETIARTKDNVVKKQALTY
EEMEAEREEEETQEDTESEDEEEQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgacggtgctggaagtgacgcgggcggcacacgaggaggtggagcggttggag
cggctgatagtgaaggagctccagaatgacccggcctccaacaaagagcgtttgtatcag
agtcaccgtgtgcgaaacatgatcgacaccattacttccacaactgaaaagcttattgga
atatatgaagatagcgacaatgcaaggaaggatgagattgccgcactcggaggtcaaact
gccactggaattaacgttttcagtgccttttatgatagactcaaagagatacgagagtat
cataggaagcacccagttgctcgtgttgttgacgccaacgacgattatgaaacacttctc
aatgaggaacttcaaattgagttcagtggagaggaagcacttggtcgatacttagacttg
catgaattatattatcagtatgtcaattctaagtttggagagccaattgagtattctgca
tatcttgatgttttctcagacacagataagattccccgcaaaatgaaaatgaccaggcag
taccgagaatatttggcgaatcttttggagtatctgttatactttttccagcgtacagag
cccctgcaagatcttgatcgaattttgtcaaaggtaacaactgaatttgaagaaagttgg
gctgttggaaaggtacagggatgggaaaatgacaatcaggaaaatggacatgtacttgct
gagcatgctaccattgatcttgattattatagtacagttgaagagctgatggaagtcggt
cctgaaaggttaaaggaggcactggctgcgttggggctgaagactggtggtactgttcag
caacgtgcagagaggctcttcctcacaaagcacacacctcttgaaaagttggacaagaag
cattttgctaagggtgcacgtggtgtagaaaagaatggggttgctgcagtttcacaagaa
gatggaaattctaaagaaattgcattgatggaagccaaaatgacaaaactttgtgatttg
ttagaggagacaattgctcgaacaaaagacaatgttgtaaagaagcaagccctaacatat
gaggaaatggaagcagagcgcgaggaggaagagacacaagaggacactgaaagcgaagat
gaggaggagcagatatataatcccctaaaattaccaatgggatgggatgggaagcctata
ccttattggctgtataagctacatggtctgggtcaggaatttaagtgtgagatatgcggg
aactacagttattgggggcgtcgggctttcgaacgacattttaaagaatggcgccatcaa
catgggatgcggtgtcttggtataccaaatactaagaatttcaacgaaatcacatcaatt
gaggaagcaaaggaactttggaagaagatacagcaaagacaaggagtgaacaagtggcgc
ccggatctagaggaagagtatgaagacaaagaaggcaacatctataataagaagacatac
actgacttacagcgccagggactgatatga

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