Glycine max (soybean): 100816271
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Entry
100816271 CDS
T01710
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100816271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100816271
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100816271
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100816271
NCBI-ProteinID:
XP_003539769
UniProt:
I1LR48
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Position
12:complement(5919204..5924301)
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AA seq
254 aa
AA seq
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MAGKGGSTPATYSPSPTTDKKKPSLFNEDLARPDGRSFHQCRPAFFRTGAVNAASGSAYA
EVGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGSDHKEYSSMLHKAL
EGAIILETFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSCFNK
NLVIDPVLEEENGQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAKI
MRSCLKEAVSDSQE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaaaggtggatcaactccggccacatattcgccgtctccgacgaccgataag
aagaaaccatcgcttttcaatgaggatttggctcgacctgatggccgcagtttccaccag
tgcagacccgcatttttcaggactggtgctgtgaatgctgcatctggatctgcttatgct
gaggttggaaataccaaggtcattgtatcagtatttgggccaagagagagcaagaaggcg
atgatgtacagtgatatagggcgtttgaattgcaatgtcagctttacaacgtttgcaact
ccgattcgtgggcagggttcagaccacaaagagtacagttcaatgcttcataaagctttg
gagggagcaataatactggaaacattccccaagacaactgtggatgtctttgcattggtg
ctggaatctagtggcagtgatctcccagttgtcatatcatgtgcaagccttgcccttgca
gatgcgggaataatgatgtatgatcttgttgcctcagtttctgtgtcatgttttaataag
aaccttgtcattgatcctgttttggaggaggaaaatggccaagatggaagcttaatgatt
acttgcatgccttctcgctatgaaatcacccaactcactgttactggggaatggtccacc
ccaaagattaacgagggaatgcagctgtgtttggatgcttgtgcaaagcttgcgaagatt
atgaggtcatgtttaaaagaagctgtttcggattcccaggaatag
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