Geomonas nitrogeniifigens: KP003_19055
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Entry
KP003_19055 CDS
T07937
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KP003_19055 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_19055 (uvrC)
DNA repair and recombination proteins [BR:
gnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KP003_19055 (uvrC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
5_3_exonuc
HHH
Motif
Other DBs
NCBI-ProteinID:
QXE86432
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Position
4301922..4303751
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AA seq
609 aa
AA seq
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MITQEMIKNFPTSPGVYLMKTSDGSVIYVGKARNLRNRVRAYVGDTRDSRVHIRFMVQLV
KSVDYLVTDTEKEALILENTLIKQHRPKYNINLRDDKTYFSLRMDMKEEFPRLSLVRKIP
SDGARYFGPYSSATAAKEVLKQLYKMFPLRHYPLATCMARKRPCLYYQIKQCSAPCCGLI
TSEEYAALAEGAALFLEGKNTEIARLYRAKMNKASQEMRYEDAARYRDLVRAIEVTVERQ
KMVAQGGDSDVFGLHREGDQMQIALLHIRGGTVTGGRTFLFDWELETEEGLASFLNEYYD
LDAPLPPQVLIPIPIPEPGPLEELLSEKAGKKVTIAAPQRGPKLEMVKLAQKNAETASQE
RLAKESSSATLLTELAEKLHLARTPRRIECYDISNIQGEMAVGSRVVFIDGKADKNLYRR
YRIKGVLQSDDFAMMREVLSRRFKAETTEEQPDLIVVDGGLGQLGVLNAVLEELGVAGVE
AAGLAKSRTFRDMESEEISKSDERVFRPGRKNPITLRQSCAPLLLLVRIRDEAHRFAVTY
HKTVRSKTLTGSRLDGVAGIGEKRKKALLKQFGSLKGVQGATLEELIAAPGMTEAAARAL
WEHLHGQDL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgattacccaggagatgatcaagaacttccccacctcccccggcgtctacctcatgaag
acatcggacggcagcgtcatctacgtcggcaaggcgcgcaacctgaggaaccgcgtacgc
gcttacgtcggcgacacccgcgattcacgcgtccacatccgtttcatggtgcaactggtc
aagtcggtcgactacctggtcaccgacacggagaaggaagcgctgatcctggaaaacacc
ctgatcaagcagcaccgccccaagtacaacatcaacctgcgcgacgacaagacttacttc
tcgctgcgcatggacatgaaggaagagttcccccgcctctccctggtgcgcaagatcccc
tcggacggcgcgcgctacttcggcccctattcctctgccaccgccgccaaggaggtgctg
aagcagctctacaagatgttcccgctgcgccactacccgctggcgacctgcatggcgcgc
aagcgcccctgcctttactaccagatcaagcagtgctccgccccctgctgcggcctgatc
acgagtgaggagtacgcggcgctcgccgagggggccgccctgttcctggaagggaagaac
acggagatcgcccgcctgtaccgcgccaagatgaacaaggccagccaagagatgcgctac
gaggacgcagcgcgctaccgcgacctggtgcgcgccatcgaggtgaccgtggaacggcag
aagatggtggcgcaggggggggacagcgacgtcttcggcctgcatcgcgagggtgaccag
atgcagatcgccctcctgcacatccgcggcggcaccgtaaccggcggccggaccttcctc
ttcgactgggaactggagaccgaggagggactcgcctccttcctgaacgaatactacgac
ctggacgccccgctccccccccaggtgctgatcccgatccccatcccggagccaggcccg
ctcgaggagctcctctccgaaaaggcggggaagaaggtgaccatcgcggccccgcagcgc
ggtcccaagctggagatggtgaagctggcccagaagaacgcggagaccgcgtcacaggag
cggctggccaaggaaagctcgtccgcaacgttgctgaccgagcttgccgagaagctgcac
ctcgcccgcacgcccagaaggatcgagtgctacgacatctccaacattcagggcgagatg
gcggtcgggagccgggtcgtcttcatcgacggcaaggccgacaagaacctgtaccggcgc
taccggatcaagggggtgctgcagtccgacgacttcgccatgatgcgcgaggtgctgtcg
cgccgtttcaaggcggaaaccaccgaagagcagcccgacctgatcgtggttgacggcggg
cttgggcagttgggcgtgctgaacgcggtgctggaagagctgggtgtggccggggtggag
gcggcggggctggccaagagccgcaccttcagggacatggaaagcgaggagatctcgaag
agtgacgagcgggtgttccgcccggggcgcaagaacccgatcacgcttcggcaaagttgt
gcgccgctgttgcttttggtgcgtatcagggacgaggcgcaccgtttcgcggtgacctac
cacaagaccgtgcgcagcaagaccctgaccggctcgcgtctggacggcgtggcgggaatc
ggggagaagaggaagaaggcgctcttgaagcagttcgggagtctgaaaggggtgcagggg
gcgacgcttgaggaactgatcgcggcgccggggatgaccgaggccgcggcgagggcgctc
tgggaacacctccacggccaagacctgtag
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