Geodermatophilus obscurus: Gobs_2881
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Entry
Gobs_2881 CDS
T01163
Name
(GenBank) sarcosine oxidase, alpha subunit family
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob00260
Glycine, serine and threonine metabolism
gob01100
Metabolic pathways
Module
gob_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Gobs_2881
Enzymes [BR:
gob01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Gobs_2881
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Gobs_2881
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
HI0933_like
GIDA
FAD_binding_3
DAO
Thi4
AlaDh_PNT_C
Pyr_redox
Fer2_BFD
NAD_binding_7
3HCDH_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ADB75508
UniProt:
D2S7P9
LinkDB
All DBs
Position
complement(3007666..3010533)
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AA seq
955 aa
AA seq
DB search
MTSPFRTPQGGRIDRATTVGFTFDGQTFPGHPGDTLASALLANGRHQVATSIKLGRPRGI
AAAWAEDPCGLVQIEEPFPEPMLLATTVELYDGLAAHGLPGQGRLADVPDSARYDAVHHH
VDVLVVGAGPAGLAAALTAARAGARVALVDEQSEAGGSLLSGTERLDDAPALQWVAAAVA
ELAGSPEVLHLQRTTAFGSYDDGFVLALERRTDHLGAAAPKHVSRQRVWRIRARSIVVAT
GAHERPVVFADNDRPGTMLAGAARTFLHRYGVLPGREAVVFTTNDSAYDAALDLHRAGVQ
VQAVVDARPEGSPRREECEHAGIRVLSGAVVTGTQGVGRVTHALVAPFADGEVGASSAIA
CDLLLVSGGWNPAVHLFSQARGRLRYDEALGAFLPGEALDGLTVTGSAAGVFDLAGCLAD
GQRVARAALTALTIPPAGEDRLPATPDPVVPAAPLVLWRVPDTSGADGSTSFVDLQRDAT
VADIARAVGAGLRSIEHVKRYTTIGTAHDQGKTSGVLTSGITAELLGIPVQDTGTTTFRP
PYTPVAFAALAGRDRGRLFDPERVTALHEWHGAAGAVFEDVGQWKRPRYYPQPGEDMETA
VLRECAAARTGVGILDGSTLGKIDVQGPDAAVLLDRLYTNLMSSLKVGSVRYGVMCGVDG
MVIDDGTVLRLAEDRFLVLTTTGGAAKILDWMEEWAQTEWPDLRVHCTSVTEQWVTFPVV
GPRSRDVVGAVFPHVDVSAEAFPFMTWRDTTLDGVPVRLARISFSGELAYEVYVNPWYAV
AVWQRLLDAGRPYGITPYGTETMHVLRAEKGYPIIGQDTDGTVTPHDLGMAWAVSKKKPD
FVGKRSFARPANADPLRKQLVGLLPVDRQTVLPEGSQIIDFLADGQLPPPPVPMLGHVTS
SYRSAELARPFALALVKGGRERIGDTVHVPVNGTLVPVEVTGSVLVDPEGARRDG
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcccgttccgcacgccccagggcggccgcatcgaccgcgccaccaccgtcggg
ttcaccttcgacgggcagaccttccccggtcaccccggcgacaccctggcctcggcgctg
ctcgccaacggccggcaccaggtcgccacgagcatcaagctcggccgaccgcgcggcatc
gccgccgcctgggccgaggacccgtgcggcctggtgcagatcgaggagcctttccccgag
cccatgctgctggcgaccaccgtcgagctgtacgacggactggccgcccacggcctgccg
gggcaaggccgcctcgccgacgtccccgactcggcccgctacgacgcggtccaccaccac
gtggacgtgctcgtcgtgggggccggccccgcggggctggccgccgcgctcaccgccgcc
cgggccggtgcccgcgtcgcgctcgtcgacgagcagtccgaggccggcggctccctgctc
tcgggcaccgagcggctcgacgacgccccggcgctgcagtgggtcgccgcggcggtcgcc
gagctggccggctccccggaggtgctgcacctgcagcgcaccaccgcgttcggcagctac
gacgacggtttcgtcctggccctggagcggcgcaccgaccacctcggcgccgccgcgccc
aagcacgtctcccgccagcgggtctggcgcatccgggcccgctcgatcgtcgtcgcgacg
ggggcgcacgagcgtccggtcgtcttcgccgacaacgaccgcccggggaccatgctggcc
ggcgccgcccggacgttcctgcaccgctacggcgtgctgcccggccgcgaggccgtcgtg
ttcaccacgaacgacagcgcctacgacgccgccctcgacctgcaccgcgcgggtgtgcag
gtgcaggcggtggtcgacgcccggccggagggctcgccgcgccgcgaggagtgcgagcac
gcgggcatccgcgtcctgtccggtgccgtcgtgaccggcacgcagggcgtcgggcgggtc
acgcacgccctcgtcgccccgttcgcggacggcgaggtcggcgccagcagcgcgatcgcc
tgcgacctgctcctggtcagcgggggctggaaccccgcggtgcacctgttcagccaggcc
cgcggccggctccgctacgacgaggccctcggtgcgttcctccccggggaggcgctcgac
ggcctgaccgtcaccggctcggccgccggcgtgttcgacctggccgggtgcctggccgac
gggcagcgggtggcgcgcgccgcgctgacggcgctgacgatcccgccggcgggggaggac
cggctgcccgccaccccggaccccgtcgtcccggccgcgccgctggtgctgtggcgggtg
ccggacacctccggcgccgacggcagcacctcgttcgtcgacctgcagcgcgacgcgacg
gtcgctgacatcgcccgcgcggtcggcgccgggctgcgctccatcgagcacgtcaagcgc
tacacgacgatcgggacggcgcacgaccagggcaagacctccggcgtcctcacctcgggg
atcaccgccgagctgctcgggatcccggtgcaggacaccgggaccaccacgttccggccg
ccctacacccccgtcgccttcgccgccctggccggccgcgaccgcggccggctcttcgac
cccgagcgggtcacggccctgcacgagtggcacggagcggcgggcgcggtcttcgaggac
gtcggtcagtggaagcgtccccgctactacccgcagcccggcgaggacatggagaccgcg
gtcctgcgggagtgcgccgcggcccggaccggcgtcgggatcctcgacggctccaccctc
ggcaagatcgacgtccagggcccggacgccgccgtcctgctcgaccggctctacacgaac
ctgatgagcagcctgaaggtcggctccgtccgctacggggtcatgtgcggcgtcgacggc
atggtcatcgacgacggcaccgtgctgcgcctggccgaggaccgcttcctcgtcctcacc
accaccggcggcgcggcgaagatcctcgactggatggaggagtgggcccagacggagtgg
ccggacctgcgggtccactgcacgtcggtcaccgagcagtgggtcaccttccccgtcgtg
gggccgcggtcccgcgacgtcgtcggcgcggtcttcccccacgtggacgtctccgccgag
gccttcccgttcatgacctggcgggacaccaccctcgacggggtgccggtccggctggcc
cggatcagcttctccggcgagctcgcgtacgaggtctacgtcaacccctggtacgcggtc
gcggtctggcagcggctgctcgacgccggccgcccgtacggcatcacgccgtacggcacg
gagaccatgcacgtcctgcgcgcggagaagggttacccgatcatcgggcaggacaccgac
ggcaccgtcaccccgcacgacctcggtatggcgtgggcggtctcgaagaagaagcccgac
ttcgtcggcaagcgctccttcgcccgcccggccaacgccgacccgctgcgcaagcagctg
gtcgggctgctgccggtggaccggcagaccgtgctgccggagggctcccagatcatcgac
ttcctcgccgacggccagctgccgcccccgccggtcccgatgctcggccacgtcacctcc
agctaccgcagcgccgagctcgcccgccccttcgccctggccctggtcaagggcggccgg
gagcgcatcggtgacaccgtccacgtccccgtcaacggcaccctcgtcccggtcgaagtc
accggctcggtgctggtcgaccccgaaggagcccgtcgcgatggctga
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