Gluconobacter oxydans H24: B932_1994
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Entry
B932_1994 CDS
T02348
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
goh
Gluconobacter oxydans H24
Pathway
goh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B932_1994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goh03021
]
B932_1994
03400 DNA repair and recombination proteins [BR:
goh03400
]
B932_1994
Enzymes [BR:
goh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B932_1994
Transcription machinery [BR:
goh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B932_1994
DNA repair and recombination proteins [BR:
goh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B932_1994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AFW01561
LinkDB
All DBs
Position
2016231..2020403
Genome browser
AA seq
1390 aa
AA seq
DB search
MNAITKSFTGRKRIRKSFGRIPEIAPMPNLIDVQRASYEAFLQMNVSPDARQNSGLQEVF
RSVFPINDFAGRGRLDFVSYEFEEPKYDVEECIQRGLTYAAPLKVILRLTTWDIDEDTGS
RSIHDLKEQPVYMGDMPLMTDNGTFIINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYL
FAARVIPYRGSWLDFEFDAKDLIYVRIDRKRKLPVTTLLYALEGANYIAQRDQKIAEGGD
VEGLDIRGMDQDEILSYFYDMVPFTRMGDGWARPFEPEAFRGQKLLSPLVDADTGEVVAE
ADAKLTARMVRKIAEKTRVVQVGRLDVLGRYIAHDLVNEHTGEIYGEAGEELTEDRLVAL
EELGITELPTLSVDGSHGPWIRNTLTVDKNNSRDEALIDIYRIMRPGEPPTKETAEAMFR
GLFFDQDRYDLSSVGRVKMNMRLDVDAPDTLRVLRKEDILRTIKIMCDLKDGRGQIDDID
NLGNRRVRSVGELMENQYRVGLLRMERAIRERMGSVDIDTVMPHDLINAKPAAAAVREFF
GSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEG
PNIGLINSLSTYAKVNKYGFIETPYRLVKDGILQDGWKYLSAMEEEKLVVAQADAKQSAD
GHLTDELVSVRKSGDFRVVPPEQVTACDVSPKQLVSVAAALIPFLENDDANRALMGANMQ
RQAVPLVKADAPLVGTGMEAAVARDSGATIVAKRRGIIDQIDGARIVVRATDDAGSTQGV
DIYRLRKYMRSNQSTCINQRPLVKVGDTVHAGDIIADGPSTELGELALGRNVLVAFMPWN
GYNFEDSILISERIARDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALRNLDEA
GIVYVGAEVNPGDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLKLPPGTTGTI
VDVRVFSRRGVDKDERAMAIERSEIERLTKDRDDERSIQERSFHNRLRERLVGQVAGAGF
KGIRSGTPITVEVLDEHPRAAWRNISVSSDEVTAELETLRSEFDEAVRRINARFDNKVEK
LQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSRVVPVEDMPFLENGQAVD
IVLNPLGVPSRMNIGQILETHLGWACANIGASIGEMVDEYQRTGERKQELLDRLRDVYGD
EIFETDVATLPNEQLIELANNLRKGLPIATPVFDGASIPDIEGMLEKAGVNKSGQSQLID
GRTGETFERQTTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVREQDDFEAGIPESFNVLIKELKSLG
LNVELEQGEI
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatcaccaaatcgttcacgggacgcaagaggatccgcaaaagcttcgggcgc
attcccgaaattgcgccgatgcccaatttgatcgatgtgcagcgcgcttcctacgaagcg
tttctgcagatgaatgtgagccctgacgcacgtcagaactccggtctgcaggaagtgttc
cgttcggttttcccaatcaatgactttgctggtcgcggtcgtctggacttcgtgtcttac
gagttcgaagagccgaagtatgacgttgaagaatgcattcagcgtggtctgacatacgca
gcgccgctgaaagtcatcctgcgtctgacaacgtgggacatcgatgaagatacgggttcg
cgctccattcatgatctgaaggagcagccggtctacatgggcgacatgccgctcatgaca
gacaacggcaccttcattatcaacggtaccgagcgcgtcatcgtttctcagatgcatcgt
agcccaggtgtcttcttcgatcacgataagggcaagacgcattcttcgggcaagtatctc
tttgctgcccgtgtgattccatatcgtggttcatggctcgattttgaattcgacgccaag
gacctgatctacgttcgtattgatcgtaagcgtaagcttcctgtcacgacgcttctgtat
gcacttgaaggtgcaaactacatcgcgcagcgtgaccagaagatcgcagaaggcggggat
gtcgaaggtctcgacattcgcggcatggatcaggacgagatcctgtcctacttctatgac
atggttcctttcacccggatgggtgatggctgggcgcgtcctttcgagccagaagcattc
cgcggccaaaagctgctgagcccgctggtcgatgctgacacgggtgaagtggtcgctgag
gcagacgccaagctgacggcgcgtatggtgcgcaagattgcagaaaagacccgcgtggtg
caggtcggtcgtcttgatgtgctgggccgttatattgcgcatgacctcgtcaatgagcac
accggtgagatttacggcgaagctggcgaggaactgacggaagatcgtcttgttgctctt
gaagagcttggcattactgaacttccgacgctttcggttgacggatcgcacggtccttgg
atccgcaatacgctgactgttgacaagaacaacagccgtgacgaagccttgatcgatatc
tatcgcatcatgcgtccgggtgagccgccgaccaaggaaaccgccgaagcgatgttccgt
ggtctcttcttcgatcaggaccgctacgatctctcgtctgttggtcgtgtcaagatgaac
atgcgtcttgatgtcgatgcaccggataccctgcgcgttctgcgcaaggaagatatcctg
cgcaccatcaagatcatgtgtgacctcaaggacggtcgcggccagattgacgatattgac
aaccttggtaaccgtcgtgttcgctctgttggcgaactgatggagaaccagtatcgcgtt
ggcctgctccgtatggaacgcgccattcgtgaacgtatgggttccgtcgatattgatacg
gtcatgccgcatgatctgatcaatgcaaagccggcggctgctgcggttcgtgagttcttc
ggttcgtcacagctcagccagttcatggatcagaccaacccgctctccgaagtgacgcac
aaacgtcgtctttcggcgcttggtccgggcggtctgacccgtgagcgtgcaggcttcgaa
gtccgtgacgttcatccgacgcattatggccgtatctgtccgatcgagacgcctgaaggc
ccgaacatcggtctgatcaactcgctttcaacgtatgctaaggtcaacaagtacggcttc
atcgaaacgccgtatcgtctggtcaaggacggcattcttcaggacggctggaaatatctt
tccgccatggaagaagagaagctcgtcgttgcgcaggctgatgccaagcagagtgcagat
ggccatctgacggacgagctggtttccgtccgtaagtccggtgacttccgtgttgttccg
cctgagcaggttacggcctgtgacgtgtctccaaagcagcttgtttcggttgctgcggct
ctcattccgttccttgagaacgatgacgccaaccgtgcgctcatgggcgcaaacatgcag
cgtcaggctgttccgctggtgaaggctgatgccccgctggttggaacaggcatggaagca
gctgttgcacgtgactccggcgcgacgatcgttgccaagcgtcgcggtatcatcgaccag
atcgatggtgcgcgtatcgttgtccgtgcgactgacgatgcgggttcgacgcagggcgtc
gatatttatcgcctgcgtaagtacatgcgttcgaaccagtctacctgcatcaatcagcgt
ccgctggtgaaggttggtgacacggttcatgctggcgacatcattgcggatggtccgtcc
accgaactgggtgaactggctctgggtcgcaacgtgctcgtcgcgtttatgccctggaac
ggttacaactttgaggactccatcctcatctccgagcgtatcgcacgtgatgacgtcttc
acttcgatccacatcgaagaattcgaagtcatggctcgtgacacgaagctcggccaggag
gaaatcacccgcgacattccgaatgtcggtgaagaagctcttcgtaaccttgacgaggca
ggcattgtctatgtcggcgccgaggtgaatccgggtgatattctcgtcggtaaggtgacg
ccgaagggtgaaagcccgatgacgccggaagaaaagctcctccgcgccatcttcggtgag
aaggcttctgacgttcgtgatacgtcccttaagctgccacctggtacgaccggtacgatt
gttgatgttcgcgtcttctcacgtcgcggcgtcgacaaggacgagcgtgcgatggcaatc
gagcgttccgagattgaacgcctgaccaaggaccgggatgacgaacgttccattcaggag
cgtagcttccacaatcgtctgcgtgagcgtctggttggccaggttgctggtgccgggttc
aagggtatccgttctggtacgccgatcacggttgaagttctggatgagcatcctcgtgcg
gcatggcgcaacatctcggtctcctctgatgaggtgactgctgaactcgaaacactgcgt
tccgagtttgatgaagcggtccgtcgcatcaatgcgcgttttgacaacaaggttgaaaag
ctgcagcgcggtgacgaactgccgcctggcgtgatgaagatggttaaggtctttgttgcc
gtgaagcgtaagcttcagccgggtgacaagatggctggtcgtcacggcaacaagggtgtc
gtttcccgcgttgtgcctgtcgaagacatgccgttccttgagaatggtcaggctgttgat
atcgttctgaacccgctgggtgtgccgtcgcgcatgaacatcggtcagatccttgaaacc
catctgggttgggcttgtgccaatatcggtgcaagcatcggtgagatggttgacgagtat
cagcggactggtgagcggaagcaggaacttcttgatcgtctgcgggacgtttacggggac
gaaatcttcgaaaccgacgttgctactctgccgaacgagcagctcatcgagttggccaac
aaccttcgcaagggtcttccgattgctaccccggtgttcgatggtgcttccatcccggac
atcgaaggcatgctggaaaaggctggtgtgaacaagtcgggtcagtctcagctgatcgat
ggtcgtacgggcgagacatttgagcgccagaccacggttggttacatttacatgctgaag
ctgcatcaccttgtcgatgacaagatccatgcacgttcgatcggtccgtactccctcgtc
acgcagcagccgctgggtggtaaggcgcagttcggtggtcagcgctttggtgaaatggaa
gtctgggcgctggaagcatatggtgcggcttatacgctgcaggaaatgctgacggtgaag
tcggatgacgtttccggccgtaccaaagtctatgaggctatcgtgcgcgagcaggatgac
ttcgaagcaggcattccggagagcttcaacgttctgatcaaggaactgaagtctctcggc
ctgaatgtcgaactcgagcagggcgagatttaa
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