Gluconobacter oxydans H24: B932_2078
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Entry
B932_2078 CDS
T02348
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
goh
Gluconobacter oxydans H24
Pathway
goh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B932_2078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goh03021
]
B932_2078
Transcription machinery [BR:
goh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B932_2078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Fib_alpha
WipA_N
IML1
Motif
Other DBs
NCBI-ProteinID:
AFW01645
LinkDB
All DBs
Position
2095371..2097323
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AA seq
650 aa
AA seq
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MATKTASGTDRNAQEQEGDATLLDTQSAAVKRLIAKGRERGHITFDELNAVLPQDQMSSE
QIEDVMAALSEMGIQVLENEEQDDAEPAQEEAKEEAEESDEPQGGNIDAEAASRTDDPVR
MYLREMGSVELLSREGEIAIAKRIEAGRDEMIGGLCESPLTIRAIISWHERLKDGEMLLR
DIVDLEASQAGEPGPEGEEGEEGEESADDDASDDDTEEGDGEQQEGSGLSLSALEEKLKP
EILARFEAIEPLYHKLRQLQVKRLEALTAGEESTDKSEQVYEELRRELVSLVEQVHLHNN
RIEELVAQIKVHVQRLNQLEGRMLRLAESCKITRDDFLLKYRNREMDPTWIEFICTLPGK
GWKTLTTRHLEQLRSLRGELSALAHETGLPVGEFRRVYATISRGERDSTRAKKEMIEANL
RLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIA
DQAKTIRIPVHMIETINKLVRTSRQMLHEIGREPAPEELAEKLGMPLEKVRKVLKIAKEP
ISLETPIGDEEDSHLGDFIEDKTAVIPLDAAIQTNLREATTRVLASLTPREERVLRMRFG
IGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDDN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaaacagcctctggtacggatcggaacgcgcaggaacaggagggggatgcc
actcttcttgatacgcagtccgctgccgtaaagcggctgatcgccaaggggcgtgaacgt
ggccacatcacgtttgacgagctgaacgccgttctgccgcaggatcagatgtcctccgag
cagatcgaagacgtgatggcagctctgtcagaaatgggcattcaggttctggagaacgaa
gagcaggacgacgctgagcctgctcaggaagaagccaaggaagaggccgaggagtccgac
gagccgcagggtggtaacatcgacgccgaggctgccagccggacggatgatccggttcgt
atgtaccttcgcgagatgggctcggtcgagcttctgtcccgtgaaggcgaaattgccatt
gccaagcgtatcgaggccggtcgggacgagatgatcggtgggctttgcgaaagcccgctg
acgatccgtgccatcatttcctggcatgagcgtctcaaggatggcgaaatgctgcttcgt
gacatcgtggatctggaggccagccaggctggtgagccagggcccgagggcgaggaaggt
gaagaaggcgaagagtcggctgatgacgatgcgagcgatgacgacaccgaggaaggtgac
ggtgagcagcaggaaggcagtggcctctccctgtccgctctggaagaaaagctgaagccg
gaaatcctggcacgctttgaagccattgagccgctgtatcacaagcttcgtcagttgcag
gtcaagcgtcttgaggccctgacggccggtgaagaatcaacggacaagtccgagcaggtt
tacgaagagctgcgtcgtgaactggtcagtctggttgagcaggttcatctgcataacaac
cggattgaggaactggtcgcccagatcaaggtccatgttcagcgtttgaaccagcttgaa
ggccggatgctgcgtcttgcggaaagctgcaagatcacgcgtgatgacttcctgctgaag
tatcgtaaccgcgagatggacccgacctggatcgagttcatctgcacccttccgggcaag
ggctggaagacactgacaacccgccacctggagcagcttcgtagcctgcgtggagaactg
tctgcgctggcgcatgagacgggtctgccggttggcgaattccgtcgcgtgtatgcgacc
atttcccgcggtgagcgtgattccacgcgtgctaagaaggaaatgatcgaggcgaacctg
cgtctcgtgatctcgattgccaagaagtacacgaaccgtggtctgcagttcctggatctg
attcaggaaggcaacattggtctgatgaaggccgtggacaagttcgagtaccgccgtggt
tacaagttctcgacctatgccacctggtggatccgtcaggccatcacgcgttccatcgcg
gatcaggccaagacgatccgtattccggtgcacatgatcgagacgatcaacaagctggtg
cgcacgtcccgtcagatgctgcatgagatcgggcgtgagccggctccggaagagcttgct
gagaagcttggcatgccgctggaaaaggttcggaaggtcctgaagatcgccaaggaaccg
atctcccttgaaacgccgattggcgacgaggaagatagccatcttggtgacttcattgag
gataagacggccgtcattccgttggatgccgcaatccagacgaacctgcgtgaagcgacg
acccgtgtgctggcgtccctgacgccgcgtgaagagcgcgtgcttcggatgcgtttcggc
atcggcatgaacacggatcacacgcttgaggaagtcggacagcagttcaacgtgacccgc
gagcgtatccgtcagatcgaggcgaaggcgcttcgtaagctcaagcacccgagccgtagc
cgcaagctgcggtccttcctcgacgataactga
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