Gluconobacter oxydans H24: B932_2582
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Entry
B932_2582 CDS
T02348
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
goh
Gluconobacter oxydans H24
Pathway
goh03420
Nucleotide excision repair
goh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B932_2582
03430 Mismatch repair
B932_2582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goh03400
]
B932_2582
Enzymes [BR:
goh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B932_2582
DNA repair and recombination proteins [BR:
goh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B932_2582
MMR (mismatch excision repair)
Other MMR factors
B932_2582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFW02133
LinkDB
All DBs
Position
2580968..2583196
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AA seq
742 aa
AA seq
DB search
MPQDPLIPTPEYLSRLNPEQRRAIETTEGPLLILAGAGTGKTRVLTTRFAHLLLTGRAYP
SQILAVTFTNKAAREMRERVGAILGEPAEGLWLGTFHAICARMLRRHAEYVGLTSGFNIL
DTDDQLRLLKQIMEPFRLDTKRWPPNQLMGIIQRWKDRGLTPDRVTPAEDTDFANGQALA
IYRGYQERLIQLNTCDFGDLMLHMVEILRSQPNVLAQYHRIFRYILVDEYQDTNTIQYLW
LRLLAKREHGPSNIACVGDDDQSIYSWRGAEVENILRFEKDFPGAVVVRLERNYRSTAQI
LAAAAGLIAHNEGRLGKTLRPGREDAQGEKVQIIGVRDSDEEARIVGGAIERLHADGHPL
SEMAILMRAGFQTRPFEERLMTIGVPYRIVGGLRFYERAEIRDCLAYMRVLSQPSDDLAF
ERIINVPKRGVGAVAVQKLHGLARTLPGPLTAAVLTQIEQGALKGKSKEALTSLMEAFQR
AKATLETEGQVVAVEQILEDSGYLQMWRDDRSVEAPGRLDNIRELLRAIGEFATLEGFLE
HVALVMDTESEMTDDKVSLMTLHGSKGLEFDTVFLPGWEEGVFPSQRSLDEGGNRALEEE
RRLAYVGLTRARLRAIVVHTASRRIYANWQASMPSRFIEEIPSEYVQTSGQSVESRRQAA
AAPSMFASGPFTSTRRPSGMPQTPRSRITDVQPQANVPVGATVFHQKFGEGTVIAVDGSR
LEINFENGGIKRVMANFVEIRS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcaagaccctctcatccccacgcccgaatatctctcccgcctgaacccggagcag
agacgtgccatcgagacaaccgaaggcccgcttctgatccttgctggtgcaggcacggga
aagacccgcgttctcacgacgcgttttgcccatctgcttctgacgggccgtgcctatccg
agccagatccttgccgtgaccttcaccaacaaggctgcgcgtgaaatgcgcgagcgtgtt
ggggcgatccttggcgagcctgccgaggggctttggcttggcaccttccatgccatttgc
gcgcggatgctgaggcgtcatgcggaatatgtgggcctgacgagtgggttcaatattctg
gatacggatgatcagcttcgtttgctgaagcagatcatggagccgtttcggctcgatacg
aagcgttggccgcctaaccagctcatgggtattatccagcgctggaaagatcgtgggttg
accccggatcgggtaacgcctgccgaggatacggattttgccaacgggcaggctctggct
atttatcgtgggtatcaggaacggctgatccagctcaatacctgcgatttcggcgacctg
atgctacacatggtggagatcctgcggtcccagccgaatgtgctggcgcagtatcatcgg
atcttccgttatattctggtggacgagtaccaggacaccaatacgatccagtatctctgg
ctgcgtctgctggcgaagcgggagcatggtccatccaatattgcctgtgtgggggacgac
gatcagtcgatctattcctggcgcggggctgaggtggaaaatatcctccggtttgagaag
gattttcccggagcagtggtggtgcggctggagcgtaattatcgctcgacggcacagatc
cttgccgctgctgcagggttgattgcacataacgaaggccggttgggcaagacgctgcgt
cccgggcgtgaggatgctcagggcgaaaaagtccagattatcggcgttcgcgattccgat
gaggaagccaggattgtcggtggtgcgattgagcgtctccacgccgatgggcatcccttg
tctgaaatggctattctgatgcgtgcgggctttcagacgcggccctttgaagagcgcctg
atgacgataggtgtcccctatcggattgtcggcggtttgcggttctatgaacgcgcggaa
atccgtgattgcctggcttatatgcgcgttctgtcgcagccttctgatgatctggcgttc
gagcgtatcatcaatgttcccaagcggggtgtgggcgctgttgcagtgcagaagctgcat
ggtctggcgcgcaccctgcccggcccgctgacggctgctgttctgacgcagatcgaacag
ggtgcgctcaagggaaagtccaaggaggctctgaccagtctgatggaagcgtttcagcgt
gcgaaagcgacgctggagacggaaggtcaggttgttgcggtcgagcagattcttgaagat
agcggttatttgcagatgtggcgcgatgatcgttctgtggaagcgccggggcggctcgac
aatatccgtgagcttttgcgggctatcggtgagtttgcgacgcttgaaggctttctcgag
cacgttgcactcgtcatggatacggaaagcgagatgactgatgacaaggtcagtctcatg
acgttgcacggttccaaggggctggagttcgatacggtgttccttcctggttgggaggaa
ggcgtattcccgtcccagcggtctctggatgaaggcggaaaccgcgcgctcgaagaagag
cgacgtctggcctatgtcgggctgacgcgggcgaggctccgggccatcgttgttcatacg
gccagccggcgcatttacgcgaactggcaggcttcgatgccaagccggttcatcgaggaa
attccgtccgaatacgttcagacgagtgggcagtccgttgaaagccggaggcaggctgcg
gcagccccttccatgtttgcgtccgggcctttcacgagtacgcgtcgtccttcggggatg
cctcagacccctcgctcacgcatcacggatgtgcagccgcaggcgaatgttccggttggc
gcgacggtttttcatcagaagttcggcgaaggcaccgtcattgcggtggacggcagccga
ctggaaatcaactttgaaaatggcggcatcaagcgcgtcatggcaaatttcgtggagatc
agatcgtga
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