Gordonia otitidis: LK459_09320
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Entry
LK459_09320 CDS
T07915
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
goi
Gordonia otitidis
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goi03032
]
LK459_09320 (gyrB)
03400 DNA repair and recombination proteins [BR:
goi03400
]
LK459_09320 (gyrB)
Enzymes [BR:
goi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LK459_09320 (gyrB)
DNA replication proteins [BR:
goi03032
]
Prokaryotic type
DNA Topoisomerases
LK459_09320 (gyrB)
DNA repair and recombination proteins [BR:
goi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LK459_09320 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UEA60998
LinkDB
All DBs
Position
complement(2058943..2060985)
Genome browser
AA seq
680 aa
AA seq
DB search
MADTNDKKSRKKPGEYGAESISILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDE
AMAGYASKVDVTLLEDGGVEVIDDGRGIPTSMHATGVPTVEVVMTQLHAGGKFDSDAYAV
SGGLHGVGISVVNALSTKVELEINYGGYHWEQTYNYAKPGPLIKGDATRKTGTTVRFWAD
PEIFETTTYSAETVARRLQEMAFLNKGLTITLTDRRPQTAAADAVVEGDEDTAEKPKTAE
EETSAPAVSKPRTRTYHYPDGLVDYIKHLNRTKTPIHQSVIGFTAKGPGHEVEIAMQWNS
GYSESVHTFANTINTHEGGTHEEGFRAALTSTVNKYALDKKLLKEKDGKLTGDDIREGLA
AVISVKVADPQFEGQTKTKLGNTEVKSFVQRTCNEHLGHWFEANPAEAKIIVKKAVDSAQ
ARMAARKARELVRRKTATDIGGLPGKLADCRSNDPTKCEVYIVEGDSAGGSAKSGRDSMY
QAILPIRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDLAKLRYHKIVLMADADV
DGQHISTLLLTLLFRFMKPLIENGHVYLAQPPLYKLKWQKREPEFAYSDRERDGLLEAGK
EKGWKINTDDGIQRYKGLGEMNAKELWETTMDPAVRVLRQVTLDDAAAADELFSVLMGED
VAARRSFIARNAKDVRFLDV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacacgaatgacaagaagagccggaagaagccgggcgaatacggtgccgagtcg
atcagcatcctcgaaggtctcgaagcagtccgcaagaggcccggcatgtacatcggctcc
acgggtgagcggggcctccaccatctgatctgggaggtcgtcgacaactcggtcgacgag
gccatggcgggttatgccagcaaggtcgacgtgacgctcctcgaggacggcggcgtcgag
gtgatcgacgacggtcgtggaatcccgaccagcatgcacgcgacgggcgtgcccaccgtc
gaggtcgtcatgacccagttgcacgccggtggcaagttcgactccgacgcatatgcggtg
tccggcggtctgcatggcgtcggcatctcggtggtcaacgccttgtcgaccaaggtcgag
ttggagatcaactacggcggctaccactgggaacagacgtacaactacgcgaagcccggc
ccgctgatcaagggcgacgccacccgcaagaccgggaccacggtgcgcttctgggccgat
cccgagatcttcgagacgacgacgtacagcgccgagaccgtggcgcgacgtctgcaggag
atggccttcctcaacaagggcctcaccatcacgctcaccgatcgtcgaccccagaccgca
gccgcagatgctgtcgtcgagggtgacgaggatacggccgagaagcccaagaccgccgag
gaggagacctccgctccggccgtcagcaagccgcggaccaggacttatcattacccggac
ggtctcgtcgactacatcaagcacctcaaccgcaccaagaccccgatccaccagtcggtg
atcgggttcaccgcgaagggtcccggacacgaggtcgagatcgcgatgcagtggaactcc
ggatactcggagtccgtccacaccttcgcgaacacgatcaacacgcatgagggcggtact
cacgaagaaggtttccgcgccgcgctgacgtcgacggtcaacaagtacgcgctcgacaag
aagctcctcaaggagaaggacggcaagctgaccggcgacgacatccgcgagggtctcgca
gctgtcatctcggtgaaggtcgccgacccccagttcgagggacagaccaagaccaaactc
ggcaacaccgaggtgaagagtttcgtgcagcggacgtgcaacgagcacctcggacactgg
ttcgaagcgaatccggccgaagccaagatcatcgtgaagaaggccgtcgactccgcccag
gcgcgtatggctgcccgcaaggcgcgagagctggtgcgtcgcaagaccgcgacagatatc
ggtggccttcccggcaagctcgccgactgccgcagcaacgatcccaccaagtgtgaggtc
tacatcgtggagggcgactccgcaggcggctcggccaagtccggccgcgactcgatgtac
caggcgatcctgccgatccgcggaaagatcatcaacgtcgagaaggctcgcatcgaccgt
gttctgaagaacaccgaggtgcagtcgatcatcacggctttcggtaccggtatccacgac
gagttcgacctcgccaagctccggtatcacaagatcgtgctcatggccgacgccgacgtc
gacggtcagcacatctcgacgttgctgctgaccctgctgttccgcttcatgaagcccctc
atcgagaacgggcacgtctacttggcgcagcccccgctgtacaagctgaagtggcagaag
cgcgagccggagttcgcatactccgaccgtgagcgtgacggtctgctcgaggcaggcaag
gaaaagggttggaagatcaacaccgacgacggcatccagcggtacaagggtctcggtgag
atgaacgcgaaggaactctgggaaaccaccatggatcccgctgtgcgcgtgctccgacag
gtcaccctcgacgacgcagctgccgcggacgaactcttctccgtgctgatgggcgaggac
gtggccgcgcgccgcagcttcatcgcccgcaacgcgaaagacgttcgcttccttgacgtc
tga
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